Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 AL445685.2-201ENST00000422551 342 ntBASIC2.45□□□□□ -2.02
CCDC85CA6NKD9 AC099513.1-201ENST00000490423 301 ntBASIC2.45□□□□□ -2.02
CCDC85CA6NKD9 RNA5SP182-201ENST00000516064 82 ntBASIC2.45□□□□□ -2.02
CCDC85CA6NKD9 SNORA25.15-201ENST00000516487 89 ntBASIC2.45□□□□□ -2.02
CCDC85CA6NKD9 RNA5SP153-201ENST00000516498 76 ntBASIC2.45□□□□□ -2.02
CCDC85CA6NKD9 IGLV3-17-201ENST00000519099 244 ntBASIC2.45□□□□□ -2.02
CCDC85CA6NKD9 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.45□□□□□ -2.02
CCDC85CA6NKD9 MIR6132-201ENST00000622083 109 ntBASIC2.45□□□□□ -2.02
CCDC85CA6NKD9 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC85CA6NKD9 SNORD45.3-201ENST00000363836 72 ntBASIC2.44□□□□□ -2.02
CCDC85CA6NKD9 RNU6-424P-201ENST00000384367 105 ntBASIC2.44□□□□□ -2.02
CCDC85CA6NKD9 MIR17-201ENST00000385012 84 ntBASIC2.44□□□□□ -2.02
CCDC85CA6NKD9 MIR15B-201ENST00000385045 98 ntBASIC2.44□□□□□ -2.02
CCDC85CA6NKD9 MIR181B1-201ENST00000385240 110 ntBASIC2.44□□□□□ -2.02
CCDC85CA6NKD9 RNU5E-9P-201ENST00000411164 104 ntBASIC2.44□□□□□ -2.02
CCDC85CA6NKD9 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC85CA6NKD9 SNRPGP8-201ENST00000454064 226 ntBASIC2.44□□□□□ -2.02
CCDC85CA6NKD9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.44□□□□□ -2.02
CCDC85CA6NKD9 RNU7-149P-201ENST00000516739 59 ntBASIC2.44□□□□□ -2.02
CCDC85CA6NKD9 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC85CA6NKD9 DNAJC19P9-201ENST00000555084 351 ntBASIC2.44□□□□□ -2.02
CCDC85CA6NKD9 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC85CA6NKD9 AC021506.2-201ENST00000612354 169 ntBASIC2.44□□□□□ -2.02
CCDC85CA6NKD9 AL513423.1-201ENST00000621695 132 ntBASIC2.44□□□□□ -2.02
CCDC85CA6NKD9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC85CA6NKD9 SNORD68-201ENST00000363214 84 ntBASIC2.43□□□□□ -2.02
CCDC85CA6NKD9 SNORD88.1-201ENST00000408684 91 ntBASIC2.43□□□□□ -2.02
CCDC85CA6NKD9 CYCTP-201ENST00000504253 315 ntBASIC2.43□□□□□ -2.02
CCDC85CA6NKD9 AC074198.2-201ENST00000508153 258 ntBASIC2.43□□□□□ -2.02
CCDC85CA6NKD9 RNU6-561P-201ENST00000516222 102 ntBASIC2.43□□□□□ -2.02
CCDC85CA6NKD9 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.43□□□□□ -2.02
CCDC85CA6NKD9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC85CA6NKD9 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC85CA6NKD9 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC85CA6NKD9 Y_RNA.30-201ENST00000362572 97 ntBASIC2.42□□□□□ -2.02
CCDC85CA6NKD9 Y_RNA.432-201ENST00000384087 111 ntBASIC2.42□□□□□ -2.02
CCDC85CA6NKD9 AL356379.1-201ENST00000414105 126 ntBASIC2.42□□□□□ -2.02
CCDC85CA6NKD9 MRPS17P9-201ENST00000511924 393 ntBASIC2.42□□□□□ -2.02
CCDC85CA6NKD9 RNA5SP76-201ENST00000516277 87 ntBASIC2.42□□□□□ -2.02
CCDC85CA6NKD9 RNU6-197P-201ENST00000516680 100 ntBASIC2.42□□□□□ -2.02
CCDC85CA6NKD9 AL049779.4-201ENST00000604500 156 ntBASIC2.42□□□□□ -2.02
CCDC85CA6NKD9 RNU4-84P-201ENST00000364200 139 ntBASIC2.41□□□□□ -2.02
CCDC85CA6NKD9 SNORD50B-201ENST00000364995 70 ntBASIC2.41□□□□□ -2.02
CCDC85CA6NKD9 snoU2-30.1-201ENST00000365012 70 ntBASIC2.41□□□□□ -2.02
CCDC85CA6NKD9 Y_RNA.336-201ENST00000365307 109 ntBASIC2.41□□□□□ -2.02
CCDC85CA6NKD9 RNU6-643P-201ENST00000384018 107 ntBASIC2.41□□□□□ -2.02
CCDC85CA6NKD9 SNORA6-201ENST00000384033 151 ntBASIC2.41□□□□□ -2.02
CCDC85CA6NKD9 RNU6-394P-201ENST00000410735 107 ntBASIC2.41□□□□□ -2.02
CCDC85CA6NKD9 HMGN2P32-201ENST00000444648 269 ntBASIC2.41□□□□□ -2.02
CCDC85CA6NKD9 AL121914.1-201ENST00000450188 156 ntBASIC2.41□□□□□ -2.02
CCDC85CA6NKD9 RNU7-34P-201ENST00000459394 64 ntBASIC2.41□□□□□ -2.02
CCDC85CA6NKD9 RNU6-1299P-201ENST00000516316 100 ntBASIC2.41□□□□□ -2.02
CCDC85CA6NKD9 MIR4713-201ENST00000582691 75 ntBASIC2.41□□□□□ -2.02
CCDC85CA6NKD9 MIR5092-201ENST00000583139 88 ntBASIC2.41□□□□□ -2.02
CCDC85CA6NKD9 AC120024.3-201ENST00000603167 156 ntBASIC2.41□□□□□ -2.02
CCDC85CA6NKD9 MIR6895-201ENST00000613497 78 ntBASIC2.41□□□□□ -2.02
CCDC85CA6NKD9 PVT1_3.1-201ENST00000620853 95 ntBASIC2.41□□□□□ -2.02
CCDC85CA6NKD9 SNORA25.6-201ENST00000364121 118 ntBASIC2.4□□□□□ -2.03
CCDC85CA6NKD9 RNU6-342P-201ENST00000384521 104 ntBASIC2.4□□□□□ -2.03
CCDC85CA6NKD9 MIR194-1-201ENST00000384892 85 ntBASIC2.4□□□□□ -2.03
CCDC85CA6NKD9 SNORD72-201ENST00000390994 80 ntBASIC2.4□□□□□ -2.03
CCDC85CA6NKD9 SNORA26-201ENST00000391286 122 ntBASIC2.4□□□□□ -2.03
CCDC85CA6NKD9 SEPT7P4-201ENST00000437076 306 ntBASIC2.4□□□□□ -2.03
CCDC85CA6NKD9 RNU7-121P-201ENST00000516604 62 ntBASIC2.4□□□□□ -2.03
CCDC85CA6NKD9 MIR4299-201ENST00000577899 72 ntBASIC2.4□□□□□ -2.03
CCDC85CA6NKD9 MIR4287-201ENST00000579398 78 ntBASIC2.4□□□□□ -2.03
CCDC85CA6NKD9 Pinc.1-201ENST00000616452 154 ntBASIC2.4□□□□□ -2.03
CCDC85CA6NKD9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC85CA6NKD9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.4□□□□□ -2.03
CCDC85CA6NKD9 RNU6-833P-201ENST00000363486 107 ntBASIC2.39□□□□□ -2.03
CCDC85CA6NKD9 RNU6-1062P-201ENST00000383908 107 ntBASIC2.39□□□□□ -2.03
CCDC85CA6NKD9 Y_RNA.580-201ENST00000391004 95 ntBASIC2.39□□□□□ -2.03
CCDC85CA6NKD9 U8.16-201ENST00000391279 133 ntBASIC2.39□□□□□ -2.03
CCDC85CA6NKD9 Y_RNA.622-201ENST00000411091 108 ntBASIC2.39□□□□□ -2.03
CCDC85CA6NKD9 AL161935.2-201ENST00000414627 60 ntBASIC2.39□□□□□ -2.03
CCDC85CA6NKD9 CALM2P4-201ENST00000430810 426 ntBASIC2.39□□□□□ -2.03
CCDC85CA6NKD9 SNRPGP14-201ENST00000435400 219 ntBASIC2.39□□□□□ -2.03
CCDC85CA6NKD9 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC85CA6NKD9 RNA5SP57-201ENST00000459463 123 ntBASIC2.39□□□□□ -2.03
CCDC85CA6NKD9 SNORD45.4-201ENST00000516629 73 ntBASIC2.39□□□□□ -2.03
CCDC85CA6NKD9 RNA5SP168-201ENST00000516642 112 ntBASIC2.39□□□□□ -2.03
CCDC85CA6NKD9 RNA5SP82-201ENST00000516707 92 ntBASIC2.39□□□□□ -2.03
CCDC85CA6NKD9 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC85CA6NKD9 MIR4303-201ENST00000581299 66 ntBASIC2.39□□□□□ -2.03
CCDC85CA6NKD9 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CCDC85CA6NKD9 MIR424-201ENST00000362227 98 ntBASIC2.38□□□□□ -2.03
CCDC85CA6NKD9 RNU6-239P-201ENST00000390990 99 ntBASIC2.38□□□□□ -2.03
CCDC85CA6NKD9 SNORA79-201ENST00000408376 140 ntBASIC2.38□□□□□ -2.03
CCDC85CA6NKD9 MLLT10P1-201ENST00000418346 262 ntBASIC2.38□□□□□ -2.03
CCDC85CA6NKD9 PGBD4P5-201ENST00000445958 426 ntBASIC2.38□□□□□ -2.03
CCDC85CA6NKD9 RNA5SP233-201ENST00000459153 113 ntBASIC2.38□□□□□ -2.03
CCDC85CA6NKD9 AC107027.2-201ENST00000512197 115 ntBASIC2.38□□□□□ -2.03
CCDC85CA6NKD9 AC006441.5-201ENST00000612680 209 ntBASIC2.38□□□□□ -2.03
CCDC85CA6NKD9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CCDC85CA6NKD9 SNORD14E-201ENST00000364009 85 ntBASIC2.37□□□□□ -2.03
CCDC85CA6NKD9 Y_RNA.272-201ENST00000364696 102 ntBASIC2.37□□□□□ -2.03
CCDC85CA6NKD9 Y_RNA.634-201ENST00000364811 113 ntBASIC2.37□□□□□ -2.03
CCDC85CA6NKD9 Y_RNA.486-201ENST00000384398 107 ntBASIC2.37□□□□□ -2.03
CCDC85CA6NKD9 MIR660-201ENST00000385235 97 ntBASIC2.37□□□□□ -2.03
CCDC85CA6NKD9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms