Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 SNORD115-6-201ENST00000363942 82 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 SNORD115-30-201ENST00000364117 82 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 SNORD115-42-201ENST00000364273 82 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 SNORD115-15-201ENST00000364809 81 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 SNORD115-1-201ENST00000364961 82 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 SNORD115-26-201ENST00000365067 82 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 SNORD115-10-201ENST00000365073 81 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 SNORD115-43-201ENST00000365503 82 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 SNORD115-36-201ENST00000365629 82 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 Y_RNA.471-201ENST00000384312 102 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 Y_RNA.498-201ENST00000384460 102 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 RNA5SP475-201ENST00000410568 110 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 RNU6-1001P-201ENST00000411265 100 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 AC021146.6-201ENST00000514659 117 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 RNU6-189P-201ENST00000516120 101 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 RNA5SP67-201ENST00000516422 131 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 RNU6-881P-201ENST00000516813 102 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 MTND4P7-201ENST00000523876 130 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 MIR3682-201ENST00000581338 84 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 AC008507.4-201ENST00000585464 127 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 SNORD115-40-201ENST00000606510 82 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 AC007671.2-201ENST00000637344 619 ntBASIC-1.1□□□□□ -2.59
TRAV1-2A0A0B4J238 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.11□□□□□ -2.59
TRAV1-2A0A0B4J238 AC006210.1-201ENST00000424882 111 ntBASIC-1.11□□□□□ -2.59
TRAV1-2A0A0B4J238 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-1.11□□□□□ -2.59
TRAV1-2A0A0B4J238 AL356010.1-201ENST00000456364 102 ntBASIC-1.11□□□□□ -2.59
TRAV1-2A0A0B4J238 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-1.11□□□□□ -2.59
TRAV1-2A0A0B4J238 RNU7-161P-201ENST00000517289 62 ntBASIC-1.11□□□□□ -2.59
TRAV1-2A0A0B4J238 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.11□□□□□ -2.59
TRAV1-2A0A0B4J238 AL357078.3-201ENST00000607528 618 ntBASIC-1.11□□□□□ -2.59
TRAV1-2A0A0B4J238 AP001282.2-201ENST00000616149 309 ntBASIC-1.11□□□□□ -2.59
TRAV1-2A0A0B4J238 AC009161.2-201ENST00000624626 138 ntBASIC-1.11□□□□□ -2.59
TRAV1-2A0A0B4J238 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-1.11□□□□□ -2.59
TRAV1-2A0A0B4J238 RNU6-500P-201ENST00000362349 107 ntBASIC-1.12□□□□□ -2.59
TRAV1-2A0A0B4J238 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.12□□□□□ -2.59
TRAV1-2A0A0B4J238 RNU6-214P-201ENST00000384130 107 ntBASIC-1.12□□□□□ -2.59
TRAV1-2A0A0B4J238 RNU6-636P-201ENST00000384598 107 ntBASIC-1.12□□□□□ -2.59
TRAV1-2A0A0B4J238 AL603910.2-201ENST00000407268 136 ntBASIC-1.12□□□□□ -2.59
TRAV1-2A0A0B4J238 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.12□□□□□ -2.59
TRAV1-2A0A0B4J238 MTND1P14-201ENST00000427400 950 ntBASIC-1.12□□□□□ -2.59
TRAV1-2A0A0B4J238 MTND3P23-201ENST00000431980 347 ntBASIC-1.12□□□□□ -2.59
TRAV1-2A0A0B4J238 AC010655.3-201ENST00000478818 450 ntBASIC-1.12□□□□□ -2.59
TRAV1-2A0A0B4J238 RNU6-966P-201ENST00000516479 104 ntBASIC-1.12□□□□□ -2.59
TRAV1-2A0A0B4J238 AP002963.1-201ENST00000530590 184 ntBASIC-1.12□□□□□ -2.59
TRAV1-2A0A0B4J238 MIR5696-201ENST00000578474 85 ntBASIC-1.12□□□□□ -2.59
TRAV1-2A0A0B4J238 AP000942.4-201ENST00000604811 241 ntBASIC-1.12□□□□□ -2.59
TRAV1-2A0A0B4J238 AC092807.2-201ENST00000609367 243 ntBASIC-1.12□□□□□ -2.59
TRAV1-2A0A0B4J238 AL662814.1-201ENST00000617364 121 ntBASIC-1.12□□□□□ -2.59
TRAV1-2A0A0B4J238 SNORD113-7-201ENST00000363762 77 ntBASIC-1.13□□□□□ -2.59
TRAV1-2A0A0B4J238 RNU6-82P-201ENST00000363970 107 ntBASIC-1.13□□□□□ -2.59
TRAV1-2A0A0B4J238 RNU4-36P-201ENST00000364294 144 ntBASIC-1.13□□□□□ -2.59
TRAV1-2A0A0B4J238 RNU6-282P-201ENST00000365357 103 ntBASIC-1.13□□□□□ -2.59
TRAV1-2A0A0B4J238 SNORA69-201ENST00000383895 132 ntBASIC-1.13□□□□□ -2.59
TRAV1-2A0A0B4J238 RNU6-10P-201ENST00000384036 107 ntBASIC-1.13□□□□□ -2.59
TRAV1-2A0A0B4J238 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.13□□□□□ -2.59
TRAV1-2A0A0B4J238 RNU6-455P-201ENST00000384681 107 ntBASIC-1.13□□□□□ -2.59
TRAV1-2A0A0B4J238 MIR204-201ENST00000385200 110 ntBASIC-1.13□□□□□ -2.59
TRAV1-2A0A0B4J238 SNORD72-201ENST00000390994 80 ntBASIC-1.13□□□□□ -2.59
TRAV1-2A0A0B4J238 MTATP6P17-201ENST00000431030 672 ntBASIC-1.13□□□□□ -2.59
TRAV1-2A0A0B4J238 UBE2D3P4-201ENST00000441973 436 ntBASIC-1.13□□□□□ -2.59
TRAV1-2A0A0B4J238 RPL39P25-201ENST00000449384 154 ntBASIC-1.13□□□□□ -2.59
TRAV1-2A0A0B4J238 AC244505.6-201ENST00000452829 130 ntBASIC-1.13□□□□□ -2.59
TRAV1-2A0A0B4J238 AL500527.2-201ENST00000454105 95 ntBASIC-1.13□□□□□ -2.59
TRAV1-2A0A0B4J238 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.13□□□□□ -2.59
TRAV1-2A0A0B4J238 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.13□□□□□ -2.59
TRAV1-2A0A0B4J238 RNA5SP395-201ENST00000516567 118 ntBASIC-1.13□□□□□ -2.59
TRAV1-2A0A0B4J238 AL391834.2-201ENST00000609982 546 ntBASIC-1.13□□□□□ -2.59
TRAV1-2A0A0B4J238 AL121757.2-201ENST00000611223 313 ntBASIC-1.13□□□□□ -2.59
TRAV1-2A0A0B4J238 SNORA63.5-201ENST00000363548 123 ntBASIC-1.14□□□□□ -2.59
TRAV1-2A0A0B4J238 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.14□□□□□ -2.59
TRAV1-2A0A0B4J238 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.14□□□□□ -2.59
TRAV1-2A0A0B4J238 RNU6-767P-201ENST00000384132 107 ntBASIC-1.14□□□□□ -2.59
TRAV1-2A0A0B4J238 RNU6-456P-201ENST00000384493 107 ntBASIC-1.14□□□□□ -2.59
TRAV1-2A0A0B4J238 SNORA72.6-201ENST00000384520 129 ntBASIC-1.14□□□□□ -2.59
TRAV1-2A0A0B4J238 Y_RNA.547-201ENST00000384654 119 ntBASIC-1.14□□□□□ -2.59
TRAV1-2A0A0B4J238 MIR9-2-201ENST00000384838 87 ntBASIC-1.14□□□□□ -2.59
TRAV1-2A0A0B4J238 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.14□□□□□ -2.59
TRAV1-2A0A0B4J238 MTCYBP8-201ENST00000422855 651 ntBASIC-1.14□□□□□ -2.59
TRAV1-2A0A0B4J238 EIF1P2-201ENST00000428233 350 ntBASIC-1.14□□□□□ -2.59
TRAV1-2A0A0B4J238 RPL30P15-201ENST00000457129 321 ntBASIC-1.14□□□□□ -2.59
TRAV1-2A0A0B4J238 TPTE2P5-203ENST00000458118 728 ntBASIC-1.14□□□□□ -2.59
TRAV1-2A0A0B4J238 RNU7-175P-201ENST00000515915 61 ntBASIC-1.14□□□□□ -2.59
TRAV1-2A0A0B4J238 RNA5SP470-201ENST00000516463 106 ntBASIC-1.14□□□□□ -2.59
TRAV1-2A0A0B4J238 SNORA27.4-201ENST00000516650 95 ntBASIC-1.14□□□□□ -2.59
TRAV1-2A0A0B4J238 AC018462.2-201ENST00000605375 395 ntBASIC-1.14□□□□□ -2.59
TRAV1-2A0A0B4J238 MIR6086-201ENST00000638065 55 ntBASIC-1.14□□□□□ -2.59
TRAV1-2A0A0B4J238 Y_RNA.203-201ENST00000364106 102 ntBASIC-1.15□□□□□ -2.59
TRAV1-2A0A0B4J238 RNU6-865P-201ENST00000364772 107 ntBASIC-1.15□□□□□ -2.59
TRAV1-2A0A0B4J238 RNU6-601P-201ENST00000384540 107 ntBASIC-1.15□□□□□ -2.59
TRAV1-2A0A0B4J238 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.15□□□□□ -2.59
TRAV1-2A0A0B4J238 RNU2-9P-201ENST00000410194 145 ntBASIC-1.15□□□□□ -2.59
TRAV1-2A0A0B4J238 RNU2-61P-201ENST00000411069 191 ntBASIC-1.15□□□□□ -2.59
TRAV1-2A0A0B4J238 USP9YP30-201ENST00000430729 455 ntBASIC-1.15□□□□□ -2.59
TRAV1-2A0A0B4J238 RNU7-187P-201ENST00000458985 68 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms