Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 RNU6-661P-201ENST00000362409 107 ntBASIC1.7□□□□□ -2.14
SNX9Q9Y5X1 Y_RNA.203-201ENST00000364106 102 ntBASIC1.7□□□□□ -2.14
SNX9Q9Y5X1 snoU2_19.4-201ENST00000364329 80 ntBASIC1.7□□□□□ -2.14
SNX9Q9Y5X1 Y_RNA.515-201ENST00000384535 112 ntBASIC1.7□□□□□ -2.14
SNX9Q9Y5X1 RNU6-997P-201ENST00000384725 107 ntBASIC1.7□□□□□ -2.14
SNX9Q9Y5X1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
SNX9Q9Y5X1 RNU6-440P-201ENST00000390882 105 ntBASIC1.7□□□□□ -2.14
SNX9Q9Y5X1 RNU11-5P-201ENST00000391216 129 ntBASIC1.7□□□□□ -2.14
SNX9Q9Y5X1 AC245047.3-201ENST00000429428 127 ntBASIC1.7□□□□□ -2.14
SNX9Q9Y5X1 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.7□□□□□ -2.14
SNX9Q9Y5X1 HSPE1P9-201ENST00000440046 311 ntBASIC1.7□□□□□ -2.14
SNX9Q9Y5X1 Z98949.2-201ENST00000440996 144 ntBASIC1.7□□□□□ -2.14
SNX9Q9Y5X1 AC069257.2-201ENST00000441819 155 ntBASIC1.7□□□□□ -2.14
SNX9Q9Y5X1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.7□□□□□ -2.14
SNX9Q9Y5X1 AC233266.1-201ENST00000454518 96 ntBASIC1.7□□□□□ -2.14
SNX9Q9Y5X1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.7□□□□□ -2.14
SNX9Q9Y5X1 SNORA31.17-201ENST00000516953 127 ntBASIC1.7□□□□□ -2.14
SNX9Q9Y5X1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.7□□□□□ -2.14
SNX9Q9Y5X1 MIR5688-201ENST00000580619 83 ntBASIC1.7□□□□□ -2.14
SNX9Q9Y5X1 MIR4308-201ENST00000580634 81 ntBASIC1.7□□□□□ -2.14
SNX9Q9Y5X1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SNX9Q9Y5X1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.7□□□□□ -2.14
SNX9Q9Y5X1 AC242852.1-201ENST00000612151 96 ntBASIC1.7□□□□□ -2.14
SNX9Q9Y5X1 AC244015.1-201ENST00000622301 99 ntBASIC1.7□□□□□ -2.14
SNX9Q9Y5X1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.7□□□□□ -2.14
SNX9Q9Y5X1 MIR411-201ENST00000362239 96 ntBASIC1.69□□□□□ -2.14
SNX9Q9Y5X1 Y_RNA.83-201ENST00000363005 113 ntBASIC1.69□□□□□ -2.14
SNX9Q9Y5X1 Y_RNA.140-201ENST00000363474 103 ntBASIC1.69□□□□□ -2.14
SNX9Q9Y5X1 Y_RNA.796-201ENST00000364268 102 ntBASIC1.69□□□□□ -2.14
SNX9Q9Y5X1 Y_RNA.262-201ENST00000364641 102 ntBASIC1.69□□□□□ -2.14
SNX9Q9Y5X1 Y_RNA.293-201ENST00000364908 93 ntBASIC1.69□□□□□ -2.14
SNX9Q9Y5X1 Y_RNA.799-201ENST00000364992 102 ntBASIC1.69□□□□□ -2.14
SNX9Q9Y5X1 RNU6-969P-201ENST00000383900 105 ntBASIC1.69□□□□□ -2.14
SNX9Q9Y5X1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
SNX9Q9Y5X1 RNU6-918P-201ENST00000391219 106 ntBASIC1.69□□□□□ -2.14
SNX9Q9Y5X1 SCARNA8-201ENST00000515924 131 ntBASIC1.69□□□□□ -2.14
SNX9Q9Y5X1 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.69□□□□□ -2.14
SNX9Q9Y5X1 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SNX9Q9Y5X1 AP002004.2-201ENST00000531656 154 ntBASIC1.69□□□□□ -2.14
SNX9Q9Y5X1 AL021707.8-201ENST00000609428 183 ntBASIC1.69□□□□□ -2.14
SNX9Q9Y5X1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SNX9Q9Y5X1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SNX9Q9Y5X1 Y_RNA.24-201ENST00000362508 103 ntBASIC1.68□□□□□ -2.14
SNX9Q9Y5X1 RNU4-41P-201ENST00000364426 143 ntBASIC1.68□□□□□ -2.14
SNX9Q9Y5X1 RNU6-47P-201ENST00000383866 107 ntBASIC1.68□□□□□ -2.14
SNX9Q9Y5X1 MIR562-201ENST00000384894 95 ntBASIC1.68□□□□□ -2.14
SNX9Q9Y5X1 SNORA67.5-201ENST00000391036 107 ntBASIC1.68□□□□□ -2.14
SNX9Q9Y5X1 AL049830.1-201ENST00000468034 425 ntBASIC1.68□□□□□ -2.14
SNX9Q9Y5X1 SNORD53B-201ENST00000577887 78 ntBASIC1.68□□□□□ -2.14
SNX9Q9Y5X1 MIR4303-201ENST00000581299 66 ntBASIC1.68□□□□□ -2.14
SNX9Q9Y5X1 BX248123.2-201ENST00000606318 124 ntBASIC1.68□□□□□ -2.14
SNX9Q9Y5X1 Y_RNA.802-201ENST00000614892 130 ntBASIC1.68□□□□□ -2.14
SNX9Q9Y5X1 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SNX9Q9Y5X1 RNU6-1209P-201ENST00000363655 107 ntBASIC1.67□□□□□ -2.14
SNX9Q9Y5X1 Y_RNA.253-201ENST00000364562 112 ntBASIC1.67□□□□□ -2.14
SNX9Q9Y5X1 Y_RNA.297-201ENST00000364950 91 ntBASIC1.67□□□□□ -2.14
SNX9Q9Y5X1 Y_RNA.308-201ENST00000365043 101 ntBASIC1.67□□□□□ -2.14
SNX9Q9Y5X1 SNORA8.3-201ENST00000384679 139 ntBASIC1.67□□□□□ -2.14
SNX9Q9Y5X1 RNU6-381P-201ENST00000391259 108 ntBASIC1.67□□□□□ -2.14
SNX9Q9Y5X1 AC108667.1-201ENST00000428618 249 ntBASIC1.67□□□□□ -2.14
SNX9Q9Y5X1 OR9P1P-201ENST00000496431 281 ntBASIC1.67□□□□□ -2.14
SNX9Q9Y5X1 MIR4724-201ENST00000579485 89 ntBASIC1.67□□□□□ -2.14
SNX9Q9Y5X1 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.67□□□□□ -2.14
SNX9Q9Y5X1 AL591926.4-201ENST00000616895 298 ntBASIC1.67□□□□□ -2.14
SNX9Q9Y5X1 RNU6-923P-201ENST00000364753 107 ntBASIC1.66□□□□□ -2.14
SNX9Q9Y5X1 RNA5SP363-201ENST00000365072 115 ntBASIC1.66□□□□□ -2.14
SNX9Q9Y5X1 Y_RNA.785-201ENST00000384290 109 ntBASIC1.66□□□□□ -2.14
SNX9Q9Y5X1 RNU6-493P-201ENST00000391321 108 ntBASIC1.66□□□□□ -2.14
SNX9Q9Y5X1 MIR1323-201ENST00000408090 73 ntBASIC1.66□□□□□ -2.14
SNX9Q9Y5X1 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.66□□□□□ -2.14
SNX9Q9Y5X1 RNU2-64P-201ENST00000411315 191 ntBASIC1.66□□□□□ -2.14
SNX9Q9Y5X1 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.66□□□□□ -2.14
SNX9Q9Y5X1 SNORD11-201ENST00000459124 84 ntBASIC1.66□□□□□ -2.14
SNX9Q9Y5X1 AC099513.1-201ENST00000490423 301 ntBASIC1.66□□□□□ -2.14
SNX9Q9Y5X1 RNU6-970P-201ENST00000516312 107 ntBASIC1.66□□□□□ -2.14
SNX9Q9Y5X1 RNU6-453P-201ENST00000516819 85 ntBASIC1.66□□□□□ -2.14
SNX9Q9Y5X1 MIR4762-201ENST00000585261 75 ntBASIC1.66□□□□□ -2.14
SNX9Q9Y5X1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.66□□□□□ -2.14
SNX9Q9Y5X1 MIRLET7C-201ENST00000362160 84 ntBASIC1.65□□□□□ -2.15
SNX9Q9Y5X1 MIR424-201ENST00000362227 98 ntBASIC1.65□□□□□ -2.15
SNX9Q9Y5X1 MIR126-201ENST00000362291 85 ntBASIC1.65□□□□□ -2.15
SNX9Q9Y5X1 RNU1-42P-201ENST00000364033 160 ntBASIC1.65□□□□□ -2.15
SNX9Q9Y5X1 Y_RNA.229-201ENST00000364347 113 ntBASIC1.65□□□□□ -2.15
SNX9Q9Y5X1 RNU6-1031P-201ENST00000384773 107 ntBASIC1.65□□□□□ -2.15
SNX9Q9Y5X1 MIR522-201ENST00000385071 87 ntBASIC1.65□□□□□ -2.15
SNX9Q9Y5X1 RNU6-360P-201ENST00000390944 104 ntBASIC1.65□□□□□ -2.15
SNX9Q9Y5X1 COX6CP10-201ENST00000416832 224 ntBASIC1.65□□□□□ -2.15
SNX9Q9Y5X1 Y_RNA.644-201ENST00000459006 113 ntBASIC1.65□□□□□ -2.15
SNX9Q9Y5X1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.65□□□□□ -2.15
SNX9Q9Y5X1 NDUFA4P2-201ENST00000489989 244 ntBASIC1.65□□□□□ -2.15
SNX9Q9Y5X1 HMGN1P7-201ENST00000491722 313 ntBASIC1.65□□□□□ -2.15
SNX9Q9Y5X1 Y_RNA.674-201ENST00000516362 113 ntBASIC1.65□□□□□ -2.15
SNX9Q9Y5X1 Y_RNA.700-201ENST00000516806 100 ntBASIC1.65□□□□□ -2.15
SNX9Q9Y5X1 AP000942.3-201ENST00000603702 160 ntBASIC1.65□□□□□ -2.15
SNX9Q9Y5X1 AL645939.4-201ENST00000604495 135 ntBASIC1.65□□□□□ -2.15
SNX9Q9Y5X1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.65□□□□□ -2.15
SNX9Q9Y5X1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SNX9Q9Y5X1 RNU6-60P-201ENST00000364792 103 ntBASIC1.64□□□□□ -2.15
SNX9Q9Y5X1 MIR517C-201ENST00000385103 95 ntBASIC1.64□□□□□ -2.15
SNX9Q9Y5X1 SNORA67.6-201ENST00000391093 99 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 195.7 ms