Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HRH3Q9Y5N1 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HRH3Q9Y5N1 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
HRH3Q9Y5N1 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
HRH3Q9Y5N1 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HRH3Q9Y5N1 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.14□□□□□ -1.91
HRH3Q9Y5N1 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HRH3Q9Y5N1 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HRH3Q9Y5N1 SNORD115-19-201ENST00000363098 82 ntBASIC3.14□□□□□ -1.91
HRH3Q9Y5N1 SNORD115-18-201ENST00000363293 82 ntBASIC3.14□□□□□ -1.91
HRH3Q9Y5N1 RNU4-67P-201ENST00000364569 141 ntBASIC3.14□□□□□ -1.91
HRH3Q9Y5N1 SNORD115-17-201ENST00000364612 82 ntBASIC3.14□□□□□ -1.91
HRH3Q9Y5N1 SNORA1.2-201ENST00000365189 134 ntBASIC3.14□□□□□ -1.91
HRH3Q9Y5N1 SNORA18-201ENST00000384416 132 ntBASIC3.14□□□□□ -1.91
HRH3Q9Y5N1 SNORD78.1-201ENST00000390866 65 ntBASIC3.14□□□□□ -1.91
HRH3Q9Y5N1 SNORD77B-201ENST00000391112 67 ntBASIC3.14□□□□□ -1.91
HRH3Q9Y5N1 RNU6-592P-201ENST00000411333 103 ntBASIC3.14□□□□□ -1.91
HRH3Q9Y5N1 Z92545.1-201ENST00000411782 234 ntBASIC3.14□□□□□ -1.91
HRH3Q9Y5N1 AL512326.2-201ENST00000426359 151 ntBASIC3.14□□□□□ -1.91
HRH3Q9Y5N1 AC104332.2-201ENST00000429959 156 ntBASIC3.14□□□□□ -1.91
HRH3Q9Y5N1 AC069257.2-201ENST00000441819 155 ntBASIC3.14□□□□□ -1.91
HRH3Q9Y5N1 UBL5P3-201ENST00000475112 231 ntBASIC3.14□□□□□ -1.91
HRH3Q9Y5N1 SNORA70.19-201ENST00000516717 90 ntBASIC3.14□□□□□ -1.91
HRH3Q9Y5N1 AC090821.2-201ENST00000523552 176 ntBASIC3.14□□□□□ -1.91
HRH3Q9Y5N1 MIR3618-201ENST00000580330 88 ntBASIC3.14□□□□□ -1.91
HRH3Q9Y5N1 MIR7112-201ENST00000616126 65 ntBASIC3.14□□□□□ -1.91
HRH3Q9Y5N1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.14□□□□□ -1.91
HRH3Q9Y5N1 AP003355.3-201ENST00000623465 114 ntBASIC3.14□□□□□ -1.91
HRH3Q9Y5N1 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.14□□□□□ -1.91
HRH3Q9Y5N1 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HRH3Q9Y5N1 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
HRH3Q9Y5N1 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HRH3Q9Y5N1 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HRH3Q9Y5N1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.14□□□□□ -1.91
HRH3Q9Y5N1 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HRH3Q9Y5N1 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
HRH3Q9Y5N1 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
HRH3Q9Y5N1 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HRH3Q9Y5N1 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.13□□□□□ -1.91
HRH3Q9Y5N1 RNU6-832P-201ENST00000363319 107 ntBASIC3.13□□□□□ -1.91
HRH3Q9Y5N1 RNY1P1-201ENST00000364372 112 ntBASIC3.13□□□□□ -1.91
HRH3Q9Y5N1 SNORA70.7-201ENST00000384159 133 ntBASIC3.13□□□□□ -1.91
HRH3Q9Y5N1 RNU6-950P-201ENST00000384651 107 ntBASIC3.13□□□□□ -1.91
HRH3Q9Y5N1 AC015922.2-201ENST00000435593 184 ntBASIC3.13□□□□□ -1.91
HRH3Q9Y5N1 AC006483.1-201ENST00000487308 313 ntBASIC3.13□□□□□ -1.91
HRH3Q9Y5N1 MIR3169-201ENST00000578032 83 ntBASIC3.13□□□□□ -1.91
HRH3Q9Y5N1 AL513534.2-201ENST00000603836 250 ntBASIC3.13□□□□□ -1.91
HRH3Q9Y5N1 MIR8057-201ENST00000620957 69 ntBASIC3.13□□□□□ -1.91
HRH3Q9Y5N1 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HRH3Q9Y5N1 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.13□□□□□ -1.91
HRH3Q9Y5N1 AP000648.3-201ENST00000623539 4507 ntBASIC3.13□□□□□ -1.91
HRH3Q9Y5N1 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HRH3Q9Y5N1 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
HRH3Q9Y5N1 Y_RNA.17-201ENST00000362433 111 ntBASIC3.12□□□□□ -1.91
HRH3Q9Y5N1 RNU6-461P-201ENST00000364195 107 ntBASIC3.12□□□□□ -1.91
HRH3Q9Y5N1 Y_RNA.360-201ENST00000365512 102 ntBASIC3.12□□□□□ -1.91
HRH3Q9Y5N1 MIR128-1-201ENST00000384921 82 ntBASIC3.12□□□□□ -1.91
HRH3Q9Y5N1 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.12□□□□□ -1.91
HRH3Q9Y5N1 RNU4-69P-201ENST00000410677 143 ntBASIC3.12□□□□□ -1.91
HRH3Q9Y5N1 AL606517.2-201ENST00000442855 241 ntBASIC3.12□□□□□ -1.91
HRH3Q9Y5N1 RNU2-11P-201ENST00000459191 187 ntBASIC3.12□□□□□ -1.91
HRH3Q9Y5N1 RNU7-113P-201ENST00000459273 62 ntBASIC3.12□□□□□ -1.91
HRH3Q9Y5N1 AC091826.1-201ENST00000514065 313 ntBASIC3.12□□□□□ -1.91
HRH3Q9Y5N1 RNU7-61P-201ENST00000515897 61 ntBASIC3.12□□□□□ -1.91
HRH3Q9Y5N1 RNA5SP385-201ENST00000515947 110 ntBASIC3.12□□□□□ -1.91
HRH3Q9Y5N1 SCARNA13-201ENST00000516672 275 ntBASIC3.12□□□□□ -1.91
HRH3Q9Y5N1 AC005786.1-201ENST00000588553 154 ntBASIC3.12□□□□□ -1.91
HRH3Q9Y5N1 AC069114.2-201ENST00000604699 304 ntBASIC3.12□□□□□ -1.91
HRH3Q9Y5N1 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HRH3Q9Y5N1 AC064859.1-201ENST00000624741 174 ntBASIC3.12□□□□□ -1.91
HRH3Q9Y5N1 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
HRH3Q9Y5N1 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.11□□□□□ -1.91
HRH3Q9Y5N1 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
HRH3Q9Y5N1 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HRH3Q9Y5N1 Y_RNA.290-201ENST00000364879 114 ntBASIC3.11□□□□□ -1.91
HRH3Q9Y5N1 NDUFB4P4-201ENST00000404822 243 ntBASIC3.11□□□□□ -1.91
HRH3Q9Y5N1 AL034345.1-201ENST00000407768 123 ntBASIC3.11□□□□□ -1.91
HRH3Q9Y5N1 RNA5SP261-201ENST00000410536 106 ntBASIC3.11□□□□□ -1.91
HRH3Q9Y5N1 AC096949.1-201ENST00000412047 152 ntBASIC3.11□□□□□ -1.91
HRH3Q9Y5N1 AC004941.2-201ENST00000427009 228 ntBASIC3.11□□□□□ -1.91
HRH3Q9Y5N1 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.11□□□□□ -1.91
HRH3Q9Y5N1 MIR2276-201ENST00000516886 89 ntBASIC3.11□□□□□ -1.91
HRH3Q9Y5N1 RNU6-1116P-201ENST00000517269 99 ntBASIC3.11□□□□□ -1.91
HRH3Q9Y5N1 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
HRH3Q9Y5N1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HRH3Q9Y5N1 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.1□□□□□ -1.91
HRH3Q9Y5N1 MIR148B-201ENST00000362252 99 ntBASIC3.1□□□□□ -1.91
HRH3Q9Y5N1 RNU6-170P-201ENST00000362832 104 ntBASIC3.1□□□□□ -1.91
HRH3Q9Y5N1 SNORD115-3-201ENST00000363100 82 ntBASIC3.1□□□□□ -1.91
HRH3Q9Y5N1 RNY1P10-201ENST00000363268 113 ntBASIC3.1□□□□□ -1.91
HRH3Q9Y5N1 RNU6-1019P-201ENST00000364424 107 ntBASIC3.1□□□□□ -1.91
HRH3Q9Y5N1 SNORD45B-201ENST00000364617 72 ntBASIC3.1□□□□□ -1.91
HRH3Q9Y5N1 RNU6-242P-201ENST00000384359 107 ntBASIC3.1□□□□□ -1.91
HRH3Q9Y5N1 MIR577-201ENST00000385196 96 ntBASIC3.1□□□□□ -1.91
HRH3Q9Y5N1 MIR4506-201ENST00000584693 77 ntBASIC3.1□□□□□ -1.91
HRH3Q9Y5N1 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.1□□□□□ -1.91
HRH3Q9Y5N1 MIR1255B1-201ENST00000636325 63 ntBASIC3.1□□□□□ -1.91
HRH3Q9Y5N1 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HRH3Q9Y5N1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
HRH3Q9Y5N1 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms