Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 ZNF355P-201ENST00000427301 3216 ntBASIC2.23□□□□□ -2.05
PCDHGA2Q9Y5H1 Y_RNA.182-201ENST00000363880 111 ntBASIC2.23□□□□□ -2.05
PCDHGA2Q9Y5H1 Y_RNA.265-201ENST00000364677 108 ntBASIC2.23□□□□□ -2.05
PCDHGA2Q9Y5H1 RNU6-275P-201ENST00000364910 107 ntBASIC2.23□□□□□ -2.05
PCDHGA2Q9Y5H1 MT-TT-201ENST00000387460 66 ntBASIC2.23□□□□□ -2.05
PCDHGA2Q9Y5H1 RPL30P13-201ENST00000418873 348 ntBASIC2.23□□□□□ -2.05
PCDHGA2Q9Y5H1 AC244636.1-201ENST00000421152 228 ntBASIC2.23□□□□□ -2.05
PCDHGA2Q9Y5H1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.23□□□□□ -2.05
PCDHGA2Q9Y5H1 AC079804.2-201ENST00000490376 200 ntBASIC2.23□□□□□ -2.05
PCDHGA2Q9Y5H1 Y_RNA.797-201ENST00000515977 94 ntBASIC2.23□□□□□ -2.05
PCDHGA2Q9Y5H1 MIR514B-201ENST00000516774 80 ntBASIC2.23□□□□□ -2.05
PCDHGA2Q9Y5H1 AC108706.1-201ENST00000611053 297 ntBASIC2.23□□□□□ -2.05
PCDHGA2Q9Y5H1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
PCDHGA2Q9Y5H1 Y_RNA.23-201ENST00000362496 106 ntBASIC2.22□□□□□ -2.05
PCDHGA2Q9Y5H1 RNA5SP276-201ENST00000362580 94 ntBASIC2.22□□□□□ -2.05
PCDHGA2Q9Y5H1 AL606845.1-201ENST00000404881 255 ntBASIC2.22□□□□□ -2.05
PCDHGA2Q9Y5H1 snoU13.27-201ENST00000459278 104 ntBASIC2.22□□□□□ -2.05
PCDHGA2Q9Y5H1 RPL23AP63-201ENST00000498752 471 ntBASIC2.22□□□□□ -2.05
PCDHGA2Q9Y5H1 RNA5SP200-201ENST00000516360 103 ntBASIC2.22□□□□□ -2.05
PCDHGA2Q9Y5H1 uc_338.4-201ENST00000616635 176 ntBASIC2.22□□□□□ -2.05
PCDHGA2Q9Y5H1 AL591926.4-201ENST00000616895 298 ntBASIC2.22□□□□□ -2.05
PCDHGA2Q9Y5H1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
PCDHGA2Q9Y5H1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PCDHGA2Q9Y5H1 AL596028.1-201ENST00000326971 197 ntBASIC2.21□□□□□ -2.06
PCDHGA2Q9Y5H1 SNORA16B-201ENST00000364674 135 ntBASIC2.21□□□□□ -2.06
PCDHGA2Q9Y5H1 Y_RNA.412-201ENST00000384001 104 ntBASIC2.21□□□□□ -2.06
PCDHGA2Q9Y5H1 MIR17-201ENST00000385012 84 ntBASIC2.21□□□□□ -2.06
PCDHGA2Q9Y5H1 RNU2-55P-201ENST00000411146 174 ntBASIC2.21□□□□□ -2.06
PCDHGA2Q9Y5H1 SNRPGP10-201ENST00000432323 225 ntBASIC2.21□□□□□ -2.06
PCDHGA2Q9Y5H1 HSPE1P9-201ENST00000440046 311 ntBASIC2.21□□□□□ -2.06
PCDHGA2Q9Y5H1 RNA5SP233-201ENST00000459153 113 ntBASIC2.21□□□□□ -2.06
PCDHGA2Q9Y5H1 RPS27P21-201ENST00000486977 252 ntBASIC2.21□□□□□ -2.06
PCDHGA2Q9Y5H1 SNORA31.10-201ENST00000516482 106 ntBASIC2.21□□□□□ -2.06
PCDHGA2Q9Y5H1 AC109810.1-201ENST00000534066 224 ntBASIC2.21□□□□□ -2.06
PCDHGA2Q9Y5H1 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.21□□□□□ -2.06
PCDHGA2Q9Y5H1 MIR4709-201ENST00000577272 72 ntBASIC2.21□□□□□ -2.06
PCDHGA2Q9Y5H1 MIR4762-201ENST00000585261 75 ntBASIC2.21□□□□□ -2.06
PCDHGA2Q9Y5H1 AC087685.1-201ENST00000587507 141 ntBASIC2.21□□□□□ -2.06
PCDHGA2Q9Y5H1 MIR6845-201ENST00000613182 61 ntBASIC2.21□□□□□ -2.06
PCDHGA2Q9Y5H1 MIR6766-201ENST00000622641 72 ntBASIC2.21□□□□□ -2.06
PCDHGA2Q9Y5H1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.21□□□□□ -2.06
PCDHGA2Q9Y5H1 AC005336.3-201ENST00000623833 2679 ntBASIC2.21□□□□□ -2.06
PCDHGA2Q9Y5H1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PCDHGA2Q9Y5H1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
PCDHGA2Q9Y5H1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
PCDHGA2Q9Y5H1 MIR337-201ENST00000362281 93 ntBASIC2.2□□□□□ -2.06
PCDHGA2Q9Y5H1 Y_RNA.508-201ENST00000384502 114 ntBASIC2.2□□□□□ -2.06
PCDHGA2Q9Y5H1 Y_RNA.587-201ENST00000391210 103 ntBASIC2.2□□□□□ -2.06
PCDHGA2Q9Y5H1 RN7SKP51-201ENST00000410781 304 ntBASIC2.2□□□□□ -2.06
PCDHGA2Q9Y5H1 HMGN2P38-201ENST00000423806 265 ntBASIC2.2□□□□□ -2.06
PCDHGA2Q9Y5H1 RNA5SP437-201ENST00000517249 129 ntBASIC2.2□□□□□ -2.06
PCDHGA2Q9Y5H1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.2□□□□□ -2.06
PCDHGA2Q9Y5H1 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.2□□□□□ -2.06
PCDHGA2Q9Y5H1 snoU13.31-201ENST00000607291 104 ntBASIC2.2□□□□□ -2.06
PCDHGA2Q9Y5H1 ZNF720P1-201ENST00000562403 1939 ntBASIC2.2□□□□□ -2.06
PCDHGA2Q9Y5H1 MIR126-201ENST00000362291 85 ntBASIC2.19□□□□□ -2.06
PCDHGA2Q9Y5H1 Y_RNA.118-201ENST00000363300 101 ntBASIC2.19□□□□□ -2.06
PCDHGA2Q9Y5H1 U8.5-201ENST00000364528 136 ntBASIC2.19□□□□□ -2.06
PCDHGA2Q9Y5H1 RNU6-728P-201ENST00000365375 104 ntBASIC2.19□□□□□ -2.06
PCDHGA2Q9Y5H1 Y_RNA.464-201ENST00000384282 110 ntBASIC2.19□□□□□ -2.06
PCDHGA2Q9Y5H1 MIR583-201ENST00000384846 75 ntBASIC2.19□□□□□ -2.06
PCDHGA2Q9Y5H1 MIR522-201ENST00000385071 87 ntBASIC2.19□□□□□ -2.06
PCDHGA2Q9Y5H1 AC019129.1-201ENST00000403786 261 ntBASIC2.19□□□□□ -2.06
PCDHGA2Q9Y5H1 AL023284.1-201ENST00000403956 276 ntBASIC2.19□□□□□ -2.06
PCDHGA2Q9Y5H1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.19□□□□□ -2.06
PCDHGA2Q9Y5H1 AL445646.1-201ENST00000431784 216 ntBASIC2.19□□□□□ -2.06
PCDHGA2Q9Y5H1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.19□□□□□ -2.06
PCDHGA2Q9Y5H1 AC005840.1-201ENST00000498412 377 ntBASIC2.19□□□□□ -2.06
PCDHGA2Q9Y5H1 SCARNA16.3-201ENST00000516595 184 ntBASIC2.19□□□□□ -2.06
PCDHGA2Q9Y5H1 AL049861.1-201ENST00000603130 150 ntBASIC2.19□□□□□ -2.06
PCDHGA2Q9Y5H1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.18□□□□□ -2.06
PCDHGA2Q9Y5H1 Y_RNA.441-201ENST00000384123 112 ntBASIC2.18□□□□□ -2.06
PCDHGA2Q9Y5H1 RNU4-43P-201ENST00000410628 137 ntBASIC2.18□□□□□ -2.06
PCDHGA2Q9Y5H1 CYCSP49-201ENST00000420810 319 ntBASIC2.18□□□□□ -2.06
PCDHGA2Q9Y5H1 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.18□□□□□ -2.06
PCDHGA2Q9Y5H1 NDUFA4P2-201ENST00000489989 244 ntBASIC2.18□□□□□ -2.06
PCDHGA2Q9Y5H1 OR9P1P-201ENST00000496431 281 ntBASIC2.18□□□□□ -2.06
PCDHGA2Q9Y5H1 SNORD77.4-201ENST00000516158 81 ntBASIC2.18□□□□□ -2.06
PCDHGA2Q9Y5H1 RNU6-126P-201ENST00000516685 103 ntBASIC2.18□□□□□ -2.06
PCDHGA2Q9Y5H1 SNORA31.17-201ENST00000516953 127 ntBASIC2.18□□□□□ -2.06
PCDHGA2Q9Y5H1 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.18□□□□□ -2.06
PCDHGA2Q9Y5H1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.18□□□□□ -2.06
PCDHGA2Q9Y5H1 MIR4713-201ENST00000582691 75 ntBASIC2.18□□□□□ -2.06
PCDHGA2Q9Y5H1 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PCDHGA2Q9Y5H1 MIRLET7G-201ENST00000362280 84 ntBASIC2.17□□□□□ -2.06
PCDHGA2Q9Y5H1 SNORA4.2-201ENST00000365313 147 ntBASIC2.17□□□□□ -2.06
PCDHGA2Q9Y5H1 RNU6-1138P-201ENST00000365359 106 ntBASIC2.17□□□□□ -2.06
PCDHGA2Q9Y5H1 RNU6-1031P-201ENST00000384773 107 ntBASIC2.17□□□□□ -2.06
PCDHGA2Q9Y5H1 SNORA48.3-201ENST00000391081 134 ntBASIC2.17□□□□□ -2.06
PCDHGA2Q9Y5H1 RNU6-131P-201ENST00000391144 107 ntBASIC2.17□□□□□ -2.06
PCDHGA2Q9Y5H1 AC108667.1-201ENST00000428618 249 ntBASIC2.17□□□□□ -2.06
PCDHGA2Q9Y5H1 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.17□□□□□ -2.06
PCDHGA2Q9Y5H1 SNRPGP8-201ENST00000454064 226 ntBASIC2.17□□□□□ -2.06
PCDHGA2Q9Y5H1 AC074198.2-201ENST00000508153 258 ntBASIC2.17□□□□□ -2.06
PCDHGA2Q9Y5H1 MIR4431-201ENST00000579990 94 ntBASIC2.17□□□□□ -2.06
PCDHGA2Q9Y5H1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.17□□□□□ -2.06
PCDHGA2Q9Y5H1 AC009831.4-201ENST00000620744 325 ntBASIC2.17□□□□□ -2.06
PCDHGA2Q9Y5H1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PCDHGA2Q9Y5H1 RNU6-661P-201ENST00000362409 107 ntBASIC2.16□□□□□ -2.06
PCDHGA2Q9Y5H1 SNORD68-201ENST00000363214 84 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms