Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 MIR382-201ENST00000637119 76 ntBASIC-1.69□□□□□ -2.68
AP4S1Q9Y587 AC006927.2-201ENST00000639256 389 ntBASIC-1.69□□□□□ -2.68
AP4S1Q9Y587 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.7□□□□□ -2.68
AP4S1Q9Y587 Y_RNA.319-201ENST00000365138 92 ntBASIC-1.7□□□□□ -2.68
AP4S1Q9Y587 RNU6-442P-201ENST00000383968 104 ntBASIC-1.7□□□□□ -2.68
AP4S1Q9Y587 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.7□□□□□ -2.68
AP4S1Q9Y587 ELOCP4-201ENST00000420090 333 ntBASIC-1.7□□□□□ -2.68
AP4S1Q9Y587 RPL22P17-201ENST00000438729 315 ntBASIC-1.7□□□□□ -2.68
AP4S1Q9Y587 AP000533.3-201ENST00000447704 118 ntBASIC-1.7□□□□□ -2.68
AP4S1Q9Y587 RNA5SP395-201ENST00000516567 118 ntBASIC-1.7□□□□□ -2.68
AP4S1Q9Y587 AC069113.1-201ENST00000517763 267 ntBASIC-1.7□□□□□ -2.68
AP4S1Q9Y587 AP003181.2-201ENST00000528941 181 ntBASIC-1.7□□□□□ -2.68
AP4S1Q9Y587 AP001282.2-201ENST00000616149 309 ntBASIC-1.7□□□□□ -2.68
AP4S1Q9Y587 SNORD115-2-201ENST00000362842 82 ntBASIC-1.71□□□□□ -2.68
AP4S1Q9Y587 RNA5SP192-201ENST00000364404 120 ntBASIC-1.71□□□□□ -2.68
AP4S1Q9Y587 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.71□□□□□ -2.68
AP4S1Q9Y587 RNU6-1127P-201ENST00000384580 107 ntBASIC-1.71□□□□□ -2.68
AP4S1Q9Y587 snoU13.13-201ENST00000458842 104 ntBASIC-1.71□□□□□ -2.68
AP4S1Q9Y587 RPL30P10-201ENST00000488148 337 ntBASIC-1.71□□□□□ -2.68
AP4S1Q9Y587 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.71□□□□□ -2.68
AP4S1Q9Y587 SCARNA24.1-201ENST00000516465 137 ntBASIC-1.71□□□□□ -2.68
AP4S1Q9Y587 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-1.71□□□□□ -2.68
AP4S1Q9Y587 AC013244.3-201ENST00000605614 388 ntBASIC-1.71□□□□□ -2.68
AP4S1Q9Y587 RNU6-509P-201ENST00000363519 107 ntBASIC-1.72□□□□□ -2.68
AP4S1Q9Y587 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.72□□□□□ -2.68
AP4S1Q9Y587 RNU6-702P-201ENST00000364982 107 ntBASIC-1.72□□□□□ -2.68
AP4S1Q9Y587 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.72□□□□□ -2.68
AP4S1Q9Y587 RNU6-1106P-201ENST00000390845 107 ntBASIC-1.72□□□□□ -2.68
AP4S1Q9Y587 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-1.72□□□□□ -2.68
AP4S1Q9Y587 RNU2-29P-201ENST00000410423 189 ntBASIC-1.72□□□□□ -2.68
AP4S1Q9Y587 RPL30P16-201ENST00000419341 429 ntBASIC-1.72□□□□□ -2.68
AP4S1Q9Y587 AC079140.5-201ENST00000507882 310 ntBASIC-1.72□□□□□ -2.68
AP4S1Q9Y587 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.72□□□□□ -2.68
AP4S1Q9Y587 AP000676.1-201ENST00000533307 52 ntBASIC-1.72□□□□□ -2.68
AP4S1Q9Y587 MIR3165-201ENST00000579874 75 ntBASIC-1.72□□□□□ -2.68
AP4S1Q9Y587 AC073648.5-201ENST00000603502 305 ntBASIC-1.72□□□□□ -2.68
AP4S1Q9Y587 AL662814.1-201ENST00000617364 121 ntBASIC-1.72□□□□□ -2.68
AP4S1Q9Y587 MTND5P17-201ENST00000418405 1603 ntBASIC-1.73□□□□□ -2.69
AP4S1Q9Y587 Y_RNA.97-201ENST00000363094 102 ntBASIC-1.73□□□□□ -2.69
AP4S1Q9Y587 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.73□□□□□ -2.69
AP4S1Q9Y587 MIR147A-201ENST00000385079 72 ntBASIC-1.73□□□□□ -2.69
AP4S1Q9Y587 Z82188.1-201ENST00000436709 154 ntBASIC-1.73□□□□□ -2.69
AP4S1Q9Y587 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.73□□□□□ -2.69
AP4S1Q9Y587 RNU6-1198P-201ENST00000516904 67 ntBASIC-1.73□□□□□ -2.69
AP4S1Q9Y587 RNY1P9-201ENST00000532431 109 ntBASIC-1.73□□□□□ -2.69
AP4S1Q9Y587 AC005972.2-201ENST00000604690 348 ntBASIC-1.73□□□□□ -2.69
AP4S1Q9Y587 AC009248.2-201ENST00000619826 254 ntBASIC-1.73□□□□□ -2.69
AP4S1Q9Y587 U6.114-201ENST00000636407 96 ntBASIC-1.73□□□□□ -2.69
AP4S1Q9Y587 AC007671.2-201ENST00000637344 619 ntBASIC-1.73□□□□□ -2.69
AP4S1Q9Y587 Y_RNA.151-201ENST00000363566 112 ntBASIC-1.74□□□□□ -2.69
AP4S1Q9Y587 SNORD114-29-201ENST00000364819 70 ntBASIC-1.74□□□□□ -2.69
AP4S1Q9Y587 Y_RNA.295-201ENST00000364918 102 ntBASIC-1.74□□□□□ -2.69
AP4S1Q9Y587 RNU4-66P-201ENST00000365199 138 ntBASIC-1.74□□□□□ -2.69
AP4S1Q9Y587 RNU6-809P-201ENST00000384461 107 ntBASIC-1.74□□□□□ -2.69
AP4S1Q9Y587 RNU6-159P-201ENST00000391080 106 ntBASIC-1.74□□□□□ -2.69
AP4S1Q9Y587 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.74□□□□□ -2.69
AP4S1Q9Y587 MTND2P18-201ENST00000419962 1030 ntBASIC-1.74□□□□□ -2.69
AP4S1Q9Y587 USP9YP16-201ENST00000430287 407 ntBASIC-1.74□□□□□ -2.69
AP4S1Q9Y587 snoU13.11-201ENST00000459219 104 ntBASIC-1.74□□□□□ -2.69
AP4S1Q9Y587 MTND4LP18-201ENST00000526864 291 ntBASIC-1.74□□□□□ -2.69
AP4S1Q9Y587 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.74□□□□□ -2.69
AP4S1Q9Y587 MIR3115-201ENST00000577915 68 ntBASIC-1.74□□□□□ -2.69
AP4S1Q9Y587 uc_338.10-201ENST00000621872 182 ntBASIC-1.74□□□□□ -2.69
AP4S1Q9Y587 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-1.74□□□□□ -2.69
AP4S1Q9Y587 MIR6086-201ENST00000638065 55 ntBASIC-1.74□□□□□ -2.69
AP4S1Q9Y587 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.75□□□□□ -2.69
AP4S1Q9Y587 AL603914.1-201ENST00000401964 204 ntBASIC-1.75□□□□□ -2.69
AP4S1Q9Y587 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.75□□□□□ -2.69
AP4S1Q9Y587 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.75□□□□□ -2.69
AP4S1Q9Y587 AL031667.1-201ENST00000440222 725 ntBASIC-1.75□□□□□ -2.69
AP4S1Q9Y587 RNU7-55P-201ENST00000459426 62 ntBASIC-1.75□□□□□ -2.69
AP4S1Q9Y587 AC022616.4-201ENST00000522985 181 ntBASIC-1.75□□□□□ -2.69
AP4S1Q9Y587 DEFB131E-201ENST00000532329 154 ntBASIC-1.75□□□□□ -2.69
AP4S1Q9Y587 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.75□□□□□ -2.69
AP4S1Q9Y587 AC064836.2-201ENST00000609491 462 ntBASIC-1.75□□□□□ -2.69
AP4S1Q9Y587 AC109347.2-201ENST00000610220 349 ntBASIC-1.75□□□□□ -2.69
AP4S1Q9Y587 AL512506.1-201ENST00000613918 449 ntBASIC-1.75□□□□□ -2.69
AP4S1Q9Y587 SNORD114-7-201ENST00000362520 77 ntBASIC-1.76□□□□□ -2.69
AP4S1Q9Y587 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.76□□□□□ -2.69
AP4S1Q9Y587 MIR587-201ENST00000384845 96 ntBASIC-1.76□□□□□ -2.69
AP4S1Q9Y587 RNU6-325P-201ENST00000411132 105 ntBASIC-1.76□□□□□ -2.69
AP4S1Q9Y587 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-1.76□□□□□ -2.69
AP4S1Q9Y587 snoU13.19-201ENST00000459148 104 ntBASIC-1.76□□□□□ -2.69
AP4S1Q9Y587 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-1.76□□□□□ -2.69
AP4S1Q9Y587 RNU6-334P-201ENST00000517072 102 ntBASIC-1.76□□□□□ -2.69
AP4S1Q9Y587 RNU6-280P-201ENST00000364145 104 ntBASIC-1.77□□□□□ -2.69
AP4S1Q9Y587 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.77□□□□□ -2.69
AP4S1Q9Y587 SNORA20.2-201ENST00000383922 131 ntBASIC-1.77□□□□□ -2.69
AP4S1Q9Y587 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.77□□□□□ -2.69
AP4S1Q9Y587 SNORD115.1-201ENST00000391109 76 ntBASIC-1.77□□□□□ -2.69
AP4S1Q9Y587 AC116353.3-201ENST00000511215 249 ntBASIC-1.77□□□□□ -2.69
AP4S1Q9Y587 MIR4775-201ENST00000581168 75 ntBASIC-1.77□□□□□ -2.69
AP4S1Q9Y587 SNORD115-32-201ENST00000364079 82 ntBASIC-1.78□□□□□ -2.69
AP4S1Q9Y587 RNU6-454P-201ENST00000364292 107 ntBASIC-1.78□□□□□ -2.69
AP4S1Q9Y587 Y_RNA.367-201ENST00000365544 101 ntBASIC-1.78□□□□□ -2.69
AP4S1Q9Y587 Y_RNA.471-201ENST00000384312 102 ntBASIC-1.78□□□□□ -2.69
AP4S1Q9Y587 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.78□□□□□ -2.69
AP4S1Q9Y587 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.78□□□□□ -2.69
AP4S1Q9Y587 RNU6-706P-201ENST00000517229 104 ntBASIC-1.78□□□□□ -2.69
AP4S1Q9Y587 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.78□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms