Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 RNA5SP331-201ENST00000364986 107 ntBASIC0.72□□□□□ -2.29
SHANK1Q9Y566 MIR520G-201ENST00000385064 90 ntBASIC0.72□□□□□ -2.29
SHANK1Q9Y566 RNU6-910P-201ENST00000390844 107 ntBASIC0.72□□□□□ -2.29
SHANK1Q9Y566 RNA5SP109-201ENST00000391010 116 ntBASIC0.72□□□□□ -2.29
SHANK1Q9Y566 RNU6-159P-201ENST00000391080 106 ntBASIC0.72□□□□□ -2.29
SHANK1Q9Y566 AC245047.7-201ENST00000440265 293 ntBASIC0.72□□□□□ -2.29
SHANK1Q9Y566 AC093850.1-201ENST00000454121 251 ntBASIC0.72□□□□□ -2.29
SHANK1Q9Y566 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.72□□□□□ -2.29
SHANK1Q9Y566 snoU13.9-201ENST00000458927 103 ntBASIC0.72□□□□□ -2.29
SHANK1Q9Y566 RNU6-1046P-201ENST00000516538 107 ntBASIC0.72□□□□□ -2.29
SHANK1Q9Y566 RNU7-28P-201ENST00000516759 62 ntBASIC0.72□□□□□ -2.29
SHANK1Q9Y566 RNU6-897P-201ENST00000517135 105 ntBASIC0.72□□□□□ -2.29
SHANK1Q9Y566 AC027419.1-201ENST00000522976 328 ntBASIC0.72□□□□□ -2.29
SHANK1Q9Y566 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
SHANK1Q9Y566 SNORA25.8-201ENST00000364831 128 ntBASIC0.72□□□□□ -2.29
SHANK1Q9Y566 snoU2-30.1-201ENST00000365012 70 ntBASIC0.72□□□□□ -2.29
SHANK1Q9Y566 RNU6-424P-201ENST00000384367 105 ntBASIC0.72□□□□□ -2.29
SHANK1Q9Y566 Y_RNA.509-201ENST00000384506 99 ntBASIC0.72□□□□□ -2.29
SHANK1Q9Y566 RNU6-310P-201ENST00000384655 107 ntBASIC0.72□□□□□ -2.29
SHANK1Q9Y566 MIR215-201ENST00000384858 110 ntBASIC0.72□□□□□ -2.29
SHANK1Q9Y566 Y_RNA.592-201ENST00000410274 109 ntBASIC0.72□□□□□ -2.29
SHANK1Q9Y566 AC005357.1-201ENST00000588399 301 ntBASIC0.72□□□□□ -2.29
SHANK1Q9Y566 Y_RNA.804-201ENST00000615262 101 ntBASIC0.72□□□□□ -2.29
SHANK1Q9Y566 SEPT14P17-201ENST00000617978 177 ntBASIC0.72□□□□□ -2.29
SHANK1Q9Y566 RNU6-674P-201ENST00000363831 107 ntBASIC0.71□□□□□ -2.3
SHANK1Q9Y566 SNORD114-2-201ENST00000363953 78 ntBASIC0.71□□□□□ -2.3
SHANK1Q9Y566 Y_RNA.253-201ENST00000364562 112 ntBASIC0.71□□□□□ -2.3
SHANK1Q9Y566 CALM2P4-201ENST00000430810 426 ntBASIC0.71□□□□□ -2.3
SHANK1Q9Y566 RPL23AP54-201ENST00000495129 419 ntBASIC0.71□□□□□ -2.3
SHANK1Q9Y566 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.71□□□□□ -2.3
SHANK1Q9Y566 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.71□□□□□ -2.3
SHANK1Q9Y566 AL356055.1-201ENST00000602528 446 ntBASIC0.71□□□□□ -2.3
SHANK1Q9Y566 AC073349.3-201ENST00000617616 186 ntBASIC0.71□□□□□ -2.3
SHANK1Q9Y566 SNORA33-201ENST00000363664 130 ntBASIC0.7□□□□□ -2.3
SHANK1Q9Y566 Y_RNA.280-201ENST00000364765 112 ntBASIC0.7□□□□□ -2.3
SHANK1Q9Y566 MIR653-201ENST00000385279 96 ntBASIC0.7□□□□□ -2.3
SHANK1Q9Y566 SNORA36B-201ENST00000410438 131 ntBASIC0.7□□□□□ -2.3
SHANK1Q9Y566 AL354751.2-201ENST00000415471 210 ntBASIC0.7□□□□□ -2.3
SHANK1Q9Y566 HSPE1P25-201ENST00000455484 251 ntBASIC0.7□□□□□ -2.3
SHANK1Q9Y566 RPL39P39-201ENST00000455840 151 ntBASIC0.7□□□□□ -2.3
SHANK1Q9Y566 SNORD116-28-201ENST00000516123 91 ntBASIC0.7□□□□□ -2.3
SHANK1Q9Y566 RNU6-496P-201ENST00000516145 99 ntBASIC0.7□□□□□ -2.3
SHANK1Q9Y566 RNU6-917P-201ENST00000516294 104 ntBASIC0.7□□□□□ -2.3
SHANK1Q9Y566 RAC1P9-201ENST00000604990 392 ntBASIC0.7□□□□□ -2.3
SHANK1Q9Y566 AC090574.1-201ENST00000623186 233 ntBASIC0.7□□□□□ -2.3
SHANK1Q9Y566 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
SHANK1Q9Y566 Y_RNA.136-201ENST00000363444 102 ntBASIC0.7□□□□□ -2.3
SHANK1Q9Y566 RNU1-124P-201ENST00000363861 145 ntBASIC0.7□□□□□ -2.3
SHANK1Q9Y566 RNU5E-4P-201ENST00000364931 120 ntBASIC0.7□□□□□ -2.3
SHANK1Q9Y566 AC117470.1-201ENST00000381974 330 ntBASIC0.7□□□□□ -2.3
SHANK1Q9Y566 SNORA72.4-201ENST00000384174 132 ntBASIC0.7□□□□□ -2.3
SHANK1Q9Y566 RNU6-439P-201ENST00000384188 106 ntBASIC0.7□□□□□ -2.3
SHANK1Q9Y566 RNU6-1160P-201ENST00000384546 104 ntBASIC0.7□□□□□ -2.3
SHANK1Q9Y566 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
SHANK1Q9Y566 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.7□□□□□ -2.3
SHANK1Q9Y566 AL160004.2-201ENST00000432935 350 ntBASIC0.7□□□□□ -2.3
SHANK1Q9Y566 POLR2KP2-201ENST00000438155 177 ntBASIC0.7□□□□□ -2.3
SHANK1Q9Y566 AL731563.1-201ENST00000442202 214 ntBASIC0.7□□□□□ -2.3
SHANK1Q9Y566 RNU6-764P-201ENST00000516396 105 ntBASIC0.7□□□□□ -2.3
SHANK1Q9Y566 RN7SKP88-201ENST00000516847 250 ntBASIC0.7□□□□□ -2.3
SHANK1Q9Y566 7SK.8-201ENST00000612110 250 ntBASIC0.7□□□□□ -2.3
SHANK1Q9Y566 7SK.11-201ENST00000615477 250 ntBASIC0.7□□□□□ -2.3
SHANK1Q9Y566 7SK.13-201ENST00000622040 250 ntBASIC0.7□□□□□ -2.3
SHANK1Q9Y566 MIR6759-201ENST00000638110 65 ntBASIC0.7□□□□□ -2.3
SHANK1Q9Y566 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
SHANK1Q9Y566 AL391516.1-201ENST00000554380 2449 ntBASIC0.69□□□□□ -2.3
SHANK1Q9Y566 Y_RNA.460-201ENST00000384255 102 ntBASIC0.69□□□□□ -2.3
SHANK1Q9Y566 Y_RNA.498-201ENST00000384460 102 ntBASIC0.69□□□□□ -2.3
SHANK1Q9Y566 AL590004.1-201ENST00000405321 300 ntBASIC0.69□□□□□ -2.3
SHANK1Q9Y566 PMCHL1-202ENST00000423102 261 ntBASIC0.69□□□□□ -2.3
SHANK1Q9Y566 AL135790.2-201ENST00000437701 267 ntBASIC0.69□□□□□ -2.3
SHANK1Q9Y566 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.69□□□□□ -2.3
SHANK1Q9Y566 RNU7-149P-201ENST00000516739 59 ntBASIC0.69□□□□□ -2.3
SHANK1Q9Y566 RNU7-110P-201ENST00000516891 62 ntBASIC0.69□□□□□ -2.3
SHANK1Q9Y566 AC136628.3-201ENST00000521868 290 ntBASIC0.69□□□□□ -2.3
SHANK1Q9Y566 AC127455.1-201ENST00000565496 145 ntBASIC0.69□□□□□ -2.3
SHANK1Q9Y566 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.69□□□□□ -2.3
SHANK1Q9Y566 SNORD81.1-201ENST00000363064 77 ntBASIC0.69□□□□□ -2.3
SHANK1Q9Y566 RNU6-899P-201ENST00000363947 107 ntBASIC0.69□□□□□ -2.3
SHANK1Q9Y566 RNU6-801P-201ENST00000364087 105 ntBASIC0.69□□□□□ -2.3
SHANK1Q9Y566 RNU6-879P-201ENST00000364328 108 ntBASIC0.69□□□□□ -2.3
SHANK1Q9Y566 Y_RNA.242-201ENST00000364473 110 ntBASIC0.69□□□□□ -2.3
SHANK1Q9Y566 RNU4-76P-201ENST00000364509 141 ntBASIC0.69□□□□□ -2.3
SHANK1Q9Y566 RNU6-969P-201ENST00000383900 105 ntBASIC0.69□□□□□ -2.3
SHANK1Q9Y566 RNU6-442P-201ENST00000383968 104 ntBASIC0.69□□□□□ -2.3
SHANK1Q9Y566 RNU6-1065P-201ENST00000384513 106 ntBASIC0.69□□□□□ -2.3
SHANK1Q9Y566 RNU6-131P-201ENST00000391144 107 ntBASIC0.69□□□□□ -2.3
SHANK1Q9Y566 MIR1278-201ENST00000408753 81 ntBASIC0.69□□□□□ -2.3
SHANK1Q9Y566 PIGPP3-201ENST00000425307 415 ntBASIC0.69□□□□□ -2.3
SHANK1Q9Y566 AC024405.2-202ENST00000532731 184 ntBASIC0.69□□□□□ -2.3
SHANK1Q9Y566 AC013791.1-201ENST00000616619 62 ntBASIC0.69□□□□□ -2.3
SHANK1Q9Y566 AC022140.2-201ENST00000623500 188 ntBASIC0.69□□□□□ -2.3
SHANK1Q9Y566 AC027335.2-201ENST00000624030 375 ntBASIC0.69□□□□□ -2.3
SHANK1Q9Y566 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
SHANK1Q9Y566 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.68□□□□□ -2.3
SHANK1Q9Y566 Y_RNA.152-201ENST00000363578 100 ntBASIC0.68□□□□□ -2.3
SHANK1Q9Y566 SNORA22-201ENST00000383907 134 ntBASIC0.68□□□□□ -2.3
SHANK1Q9Y566 SNORA25-201ENST00000384384 134 ntBASIC0.68□□□□□ -2.3
SHANK1Q9Y566 SNORA22C-201ENST00000384614 134 ntBASIC0.68□□□□□ -2.3
SHANK1Q9Y566 Y_RNA.549-201ENST00000384657 102 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms