Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 RNA5SP496-201ENST00000391240 109 ntBASIC1.75□□□□□ -2.13
PKP3Q9Y446 AC023449.1-201ENST00000454464 154 ntBASIC1.75□□□□□ -2.13
PKP3Q9Y446 AC099513.1-201ENST00000490423 301 ntBASIC1.75□□□□□ -2.13
PKP3Q9Y446 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.75□□□□□ -2.13
PKP3Q9Y446 AC012493.3-201ENST00000604494 112 ntBASIC1.75□□□□□ -2.13
PKP3Q9Y446 MIR6845-201ENST00000613182 61 ntBASIC1.75□□□□□ -2.13
PKP3Q9Y446 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
PKP3Q9Y446 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
PKP3Q9Y446 Y_RNA.572-201ENST00000384757 98 ntBASIC1.74□□□□□ -2.13
PKP3Q9Y446 MIR522-201ENST00000385071 87 ntBASIC1.74□□□□□ -2.13
PKP3Q9Y446 RN7SKP101-201ENST00000411376 320 ntBASIC1.74□□□□□ -2.13
PKP3Q9Y446 RPL30P13-201ENST00000418873 348 ntBASIC1.74□□□□□ -2.13
PKP3Q9Y446 RNY3P16-201ENST00000516338 101 ntBASIC1.74□□□□□ -2.13
PKP3Q9Y446 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.74□□□□□ -2.13
PKP3Q9Y446 MIR4762-201ENST00000585261 75 ntBASIC1.74□□□□□ -2.13
PKP3Q9Y446 AL513423.1-201ENST00000621695 132 ntBASIC1.74□□□□□ -2.13
PKP3Q9Y446 Y_RNA.229-201ENST00000364347 113 ntBASIC1.73□□□□□ -2.13
PKP3Q9Y446 RNU6-923P-201ENST00000364753 107 ntBASIC1.73□□□□□ -2.13
PKP3Q9Y446 RNU6-424P-201ENST00000384367 105 ntBASIC1.73□□□□□ -2.13
PKP3Q9Y446 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
PKP3Q9Y446 RNU6-493P-201ENST00000391321 108 ntBASIC1.73□□□□□ -2.13
PKP3Q9Y446 MIR1289-2-201ENST00000408360 111 ntBASIC1.73□□□□□ -2.13
PKP3Q9Y446 MIR1267-201ENST00000408723 78 ntBASIC1.73□□□□□ -2.13
PKP3Q9Y446 CALM2P4-201ENST00000430810 426 ntBASIC1.73□□□□□ -2.13
PKP3Q9Y446 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.73□□□□□ -2.13
PKP3Q9Y446 JTBP1-201ENST00000441314 247 ntBASIC1.73□□□□□ -2.13
PKP3Q9Y446 SNORD11-201ENST00000459124 84 ntBASIC1.73□□□□□ -2.13
PKP3Q9Y446 RN7SKP164-201ENST00000516138 266 ntBASIC1.73□□□□□ -2.13
PKP3Q9Y446 RNU6-1007P-201ENST00000516586 107 ntBASIC1.73□□□□□ -2.13
PKP3Q9Y446 RNA5SP168-201ENST00000516642 112 ntBASIC1.73□□□□□ -2.13
PKP3Q9Y446 Z83818.1-201ENST00000603584 150 ntBASIC1.73□□□□□ -2.13
PKP3Q9Y446 AL021707.8-201ENST00000609428 183 ntBASIC1.73□□□□□ -2.13
PKP3Q9Y446 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
PKP3Q9Y446 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
PKP3Q9Y446 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
PKP3Q9Y446 Y_RNA.274-201ENST00000364714 101 ntBASIC1.72□□□□□ -2.13
PKP3Q9Y446 RNU6-200P-201ENST00000364743 107 ntBASIC1.72□□□□□ -2.13
PKP3Q9Y446 Y_RNA.297-201ENST00000364950 91 ntBASIC1.72□□□□□ -2.13
PKP3Q9Y446 RNU6-381P-201ENST00000391259 108 ntBASIC1.72□□□□□ -2.13
PKP3Q9Y446 U8.16-201ENST00000391279 133 ntBASIC1.72□□□□□ -2.13
PKP3Q9Y446 SNORA26.9-201ENST00000391322 122 ntBASIC1.72□□□□□ -2.13
PKP3Q9Y446 PGBD4P5-201ENST00000445958 426 ntBASIC1.72□□□□□ -2.13
PKP3Q9Y446 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.72□□□□□ -2.13
PKP3Q9Y446 CYCTP-201ENST00000504253 315 ntBASIC1.72□□□□□ -2.13
PKP3Q9Y446 AC087685.1-201ENST00000587507 141 ntBASIC1.72□□□□□ -2.13
PKP3Q9Y446 AC120024.3-201ENST00000603167 156 ntBASIC1.72□□□□□ -2.13
PKP3Q9Y446 AC103810.8-201ENST00000607347 118 ntBASIC1.72□□□□□ -2.13
PKP3Q9Y446 MIR8074-201ENST00000615081 81 ntBASIC1.72□□□□□ -2.13
PKP3Q9Y446 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
PKP3Q9Y446 MIR424-201ENST00000362227 98 ntBASIC1.71□□□□□ -2.14
PKP3Q9Y446 RNU6-1123P-201ENST00000362347 106 ntBASIC1.71□□□□□ -2.14
PKP3Q9Y446 RNU6-1084P-201ENST00000362498 107 ntBASIC1.71□□□□□ -2.14
PKP3Q9Y446 snoU2_19.4-201ENST00000364329 80 ntBASIC1.71□□□□□ -2.14
PKP3Q9Y446 SNORD48-201ENST00000364953 64 ntBASIC1.71□□□□□ -2.14
PKP3Q9Y446 RNU6-203P-201ENST00000384038 104 ntBASIC1.71□□□□□ -2.14
PKP3Q9Y446 RNU6-163P-201ENST00000384396 106 ntBASIC1.71□□□□□ -2.14
PKP3Q9Y446 MIR616-201ENST00000385293 97 ntBASIC1.71□□□□□ -2.14
PKP3Q9Y446 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.71□□□□□ -2.14
PKP3Q9Y446 AC245047.8-201ENST00000456455 284 ntBASIC1.71□□□□□ -2.14
PKP3Q9Y446 RNU6-138P-201ENST00000515952 107 ntBASIC1.71□□□□□ -2.14
PKP3Q9Y446 SNORA44.1-201ENST00000517031 108 ntBASIC1.71□□□□□ -2.14
PKP3Q9Y446 RNU6-794P-201ENST00000517261 64 ntBASIC1.71□□□□□ -2.14
PKP3Q9Y446 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
PKP3Q9Y446 AL049861.1-201ENST00000603130 150 ntBASIC1.71□□□□□ -2.14
PKP3Q9Y446 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.71□□□□□ -2.14
PKP3Q9Y446 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.71□□□□□ -2.14
PKP3Q9Y446 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.71□□□□□ -2.14
PKP3Q9Y446 MIRLET7C-201ENST00000362160 84 ntBASIC1.7□□□□□ -2.14
PKP3Q9Y446 RNU6-1020P-201ENST00000363684 107 ntBASIC1.7□□□□□ -2.14
PKP3Q9Y446 snoU2-30.1-201ENST00000365012 70 ntBASIC1.7□□□□□ -2.14
PKP3Q9Y446 MIR660-201ENST00000385235 97 ntBASIC1.7□□□□□ -2.14
PKP3Q9Y446 MIR802-201ENST00000390235 94 ntBASIC1.7□□□□□ -2.14
PKP3Q9Y446 RPL31P63-201ENST00000422565 375 ntBASIC1.7□□□□□ -2.14
PKP3Q9Y446 NDUFA4P2-201ENST00000489989 244 ntBASIC1.7□□□□□ -2.14
PKP3Q9Y446 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.7□□□□□ -2.14
PKP3Q9Y446 RNU7-12P-201ENST00000516030 62 ntBASIC1.7□□□□□ -2.14
PKP3Q9Y446 SNORA25.15-201ENST00000516487 89 ntBASIC1.7□□□□□ -2.14
PKP3Q9Y446 RNU6-250P-201ENST00000516958 103 ntBASIC1.7□□□□□ -2.14
PKP3Q9Y446 MIR502-201ENST00000606349 86 ntBASIC1.7□□□□□ -2.14
PKP3Q9Y446 AL391903.3-201ENST00000612158 163 ntBASIC1.7□□□□□ -2.14
PKP3Q9Y446 uc_338.4-201ENST00000616635 176 ntBASIC1.7□□□□□ -2.14
PKP3Q9Y446 SNORD3E-202ENST00000627253 216 ntBASIC1.7□□□□□ -2.14
PKP3Q9Y446 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
PKP3Q9Y446 Y_RNA.7-201ENST00000362352 102 ntBASIC1.69□□□□□ -2.14
PKP3Q9Y446 RNU6-103P-201ENST00000363686 107 ntBASIC1.69□□□□□ -2.14
PKP3Q9Y446 Y_RNA.587-201ENST00000391210 103 ntBASIC1.69□□□□□ -2.14
PKP3Q9Y446 AC004965.1-201ENST00000413033 213 ntBASIC1.69□□□□□ -2.14
PKP3Q9Y446 PIGPP3-201ENST00000425307 415 ntBASIC1.69□□□□□ -2.14
PKP3Q9Y446 AC108059.2-201ENST00000434626 151 ntBASIC1.69□□□□□ -2.14
PKP3Q9Y446 AL138752.1-201ENST00000452964 351 ntBASIC1.69□□□□□ -2.14
PKP3Q9Y446 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.69□□□□□ -2.14
PKP3Q9Y446 SNORD45.4-201ENST00000516629 73 ntBASIC1.69□□□□□ -2.14
PKP3Q9Y446 RNU6-1116P-201ENST00000517269 99 ntBASIC1.69□□□□□ -2.14
PKP3Q9Y446 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.69□□□□□ -2.14
PKP3Q9Y446 MIR3122-201ENST00000577243 73 ntBASIC1.69□□□□□ -2.14
PKP3Q9Y446 MIR4308-201ENST00000580634 81 ntBASIC1.69□□□□□ -2.14
PKP3Q9Y446 MIR8081-201ENST00000611533 95 ntBASIC1.69□□□□□ -2.14
PKP3Q9Y446 AC027279.3-201ENST00000625055 122 ntBASIC1.69□□□□□ -2.14
PKP3Q9Y446 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.69□□□□□ -2.14
PKP3Q9Y446 AC095038.3-201ENST00000634439 195 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms