Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 RNA5SP482-201ENST00000391269 118 ntBASIC3.22□□□□□ -1.89
HCN4Q9Y3Q4 RPL21P3-201ENST00000395517 478 ntBASIC3.22□□□□□ -1.89
HCN4Q9Y3Q4 MIR1262-201ENST00000408276 93 ntBASIC3.22□□□□□ -1.89
HCN4Q9Y3Q4 AC104332.2-201ENST00000429959 156 ntBASIC3.22□□□□□ -1.89
HCN4Q9Y3Q4 SNORD45.4-201ENST00000516629 73 ntBASIC3.22□□□□□ -1.89
HCN4Q9Y3Q4 RNU7-28P-201ENST00000516759 62 ntBASIC3.22□□□□□ -1.89
HCN4Q9Y3Q4 U4atac.1-201ENST00000618345 95 ntBASIC3.22□□□□□ -1.89
HCN4Q9Y3Q4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.22□□□□□ -1.89
HCN4Q9Y3Q4 Y_RNA.213-201ENST00000364178 111 ntBASIC3.21□□□□□ -1.9
HCN4Q9Y3Q4 RNU6-690P-201ENST00000365242 106 ntBASIC3.21□□□□□ -1.9
HCN4Q9Y3Q4 MIR181B1-201ENST00000385240 110 ntBASIC3.21□□□□□ -1.9
HCN4Q9Y3Q4 MIR759-201ENST00000390224 91 ntBASIC3.21□□□□□ -1.9
HCN4Q9Y3Q4 MIR1302-4-201ENST00000408701 150 ntBASIC3.21□□□□□ -1.9
HCN4Q9Y3Q4 AC009238.1-201ENST00000442165 424 ntBASIC3.21□□□□□ -1.9
HCN4Q9Y3Q4 AC009237.6-201ENST00000446969 424 ntBASIC3.21□□□□□ -1.9
HCN4Q9Y3Q4 HMGN1P18-201ENST00000457642 277 ntBASIC3.21□□□□□ -1.9
HCN4Q9Y3Q4 RN7SL297P-201ENST00000483161 293 ntBASIC3.21□□□□□ -1.9
HCN4Q9Y3Q4 RNA5SP281-201ENST00000516504 135 ntBASIC3.21□□□□□ -1.9
HCN4Q9Y3Q4 AL035470.1-201ENST00000622571 220 ntBASIC3.21□□□□□ -1.9
HCN4Q9Y3Q4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.21□□□□□ -1.9
HCN4Q9Y3Q4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HCN4Q9Y3Q4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.2□□□□□ -1.9
HCN4Q9Y3Q4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.2□□□□□ -1.9
HCN4Q9Y3Q4 RNA5SP493-201ENST00000364115 91 ntBASIC3.2□□□□□ -1.9
HCN4Q9Y3Q4 Y_RNA.440-201ENST00000384120 114 ntBASIC3.2□□□□□ -1.9
HCN4Q9Y3Q4 AL590004.2-201ENST00000404787 371 ntBASIC3.2□□□□□ -1.9
HCN4Q9Y3Q4 RN7SKP220-201ENST00000410611 288 ntBASIC3.2□□□□□ -1.9
HCN4Q9Y3Q4 RNU6-938P-201ENST00000411285 103 ntBASIC3.2□□□□□ -1.9
HCN4Q9Y3Q4 AL445646.1-201ENST00000431784 216 ntBASIC3.2□□□□□ -1.9
HCN4Q9Y3Q4 Z96811.1-201ENST00000445880 108 ntBASIC3.2□□□□□ -1.9
HCN4Q9Y3Q4 AC087499.4-201ENST00000448505 178 ntBASIC3.2□□□□□ -1.9
HCN4Q9Y3Q4 RPL39P34-201ENST00000477141 156 ntBASIC3.2□□□□□ -1.9
HCN4Q9Y3Q4 RNY4P20-201ENST00000516678 93 ntBASIC3.2□□□□□ -1.9
HCN4Q9Y3Q4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HCN4Q9Y3Q4 SNORA63.5-201ENST00000363548 123 ntBASIC3.19□□□□□ -1.9
HCN4Q9Y3Q4 RNU6-640P-201ENST00000363693 105 ntBASIC3.19□□□□□ -1.9
HCN4Q9Y3Q4 HMGN2P32-201ENST00000444648 269 ntBASIC3.19□□□□□ -1.9
HCN4Q9Y3Q4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.19□□□□□ -1.9
HCN4Q9Y3Q4 RNU7-70P-201ENST00000516941 66 ntBASIC3.19□□□□□ -1.9
HCN4Q9Y3Q4 MIR3169-201ENST00000578032 83 ntBASIC3.19□□□□□ -1.9
HCN4Q9Y3Q4 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.19□□□□□ -1.9
HCN4Q9Y3Q4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.19□□□□□ -1.9
HCN4Q9Y3Q4 MIR622-201ENST00000638396 96 ntBASIC3.19□□□□□ -1.9
HCN4Q9Y3Q4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HCN4Q9Y3Q4 ZNF658B-202ENST00000615961 3375 ntBASIC3.19□□□□□ -1.9
HCN4Q9Y3Q4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
HCN4Q9Y3Q4 AC017071.1-201ENST00000564407 2204 ntBASIC3.19□□□□□ -1.9
HCN4Q9Y3Q4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HCN4Q9Y3Q4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HCN4Q9Y3Q4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HCN4Q9Y3Q4 MIR148B-201ENST00000362252 99 ntBASIC3.18□□□□□ -1.9
HCN4Q9Y3Q4 RNA5SP383-201ENST00000362934 120 ntBASIC3.18□□□□□ -1.9
HCN4Q9Y3Q4 Y_RNA.362-201ENST00000365518 110 ntBASIC3.18□□□□□ -1.9
HCN4Q9Y3Q4 SNORA80E-201ENST00000384744 137 ntBASIC3.18□□□□□ -1.9
HCN4Q9Y3Q4 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.18□□□□□ -1.9
HCN4Q9Y3Q4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.18□□□□□ -1.9
HCN4Q9Y3Q4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.18□□□□□ -1.9
HCN4Q9Y3Q4 SNORA64.4-201ENST00000516632 81 ntBASIC3.18□□□□□ -1.9
HCN4Q9Y3Q4 SNORD36C-201ENST00000516733 66 ntBASIC3.18□□□□□ -1.9
HCN4Q9Y3Q4 AC104027.1-201ENST00000521887 300 ntBASIC3.18□□□□□ -1.9
HCN4Q9Y3Q4 AL353997.5-201ENST00000618886 171 ntBASIC3.18□□□□□ -1.9
HCN4Q9Y3Q4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.18□□□□□ -1.9
HCN4Q9Y3Q4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HCN4Q9Y3Q4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
HCN4Q9Y3Q4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.18□□□□□ -1.9
HCN4Q9Y3Q4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HCN4Q9Y3Q4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.17□□□□□ -1.9
HCN4Q9Y3Q4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HCN4Q9Y3Q4 RNU1-133P-201ENST00000364867 167 ntBASIC3.17□□□□□ -1.9
HCN4Q9Y3Q4 Y_RNA.298-201ENST00000364960 107 ntBASIC3.17□□□□□ -1.9
HCN4Q9Y3Q4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HCN4Q9Y3Q4 RNY1P6-201ENST00000384193 109 ntBASIC3.17□□□□□ -1.9
HCN4Q9Y3Q4 RNU7-80P-201ENST00000459562 61 ntBASIC3.17□□□□□ -1.9
HCN4Q9Y3Q4 RNA5SP385-201ENST00000515947 110 ntBASIC3.17□□□□□ -1.9
HCN4Q9Y3Q4 AC021443.1-201ENST00000604478 211 ntBASIC3.17□□□□□ -1.9
HCN4Q9Y3Q4 AC046143.2-201ENST00000609789 160 ntBASIC3.17□□□□□ -1.9
HCN4Q9Y3Q4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HCN4Q9Y3Q4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HCN4Q9Y3Q4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.16□□□□□ -1.9
HCN4Q9Y3Q4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
HCN4Q9Y3Q4 RNU1-70P-201ENST00000362618 164 ntBASIC3.16□□□□□ -1.9
HCN4Q9Y3Q4 Y_RNA.544-201ENST00000384650 113 ntBASIC3.16□□□□□ -1.9
HCN4Q9Y3Q4 RNA5SP229-201ENST00000410809 99 ntBASIC3.16□□□□□ -1.9
HCN4Q9Y3Q4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.16□□□□□ -1.9
HCN4Q9Y3Q4 AC087499.2-201ENST00000432861 149 ntBASIC3.16□□□□□ -1.9
HCN4Q9Y3Q4 AL445687.1-201ENST00000439946 251 ntBASIC3.16□□□□□ -1.9
HCN4Q9Y3Q4 SNORD109B-201ENST00000458961 67 ntBASIC3.16□□□□□ -1.9
HCN4Q9Y3Q4 SNORD109A-201ENST00000459128 67 ntBASIC3.16□□□□□ -1.9
HCN4Q9Y3Q4 AP003484.1-201ENST00000530974 250 ntBASIC3.16□□□□□ -1.9
HCN4Q9Y3Q4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.16□□□□□ -1.9
HCN4Q9Y3Q4 MIR4778-201ENST00000577635 80 ntBASIC3.16□□□□□ -1.9
HCN4Q9Y3Q4 MIR5009-201ENST00000578736 100 ntBASIC3.16□□□□□ -1.9
HCN4Q9Y3Q4 AC073476.4-201ENST00000628409 72 ntBASIC3.16□□□□□ -1.9
HCN4Q9Y3Q4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
HCN4Q9Y3Q4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
HCN4Q9Y3Q4 RNU6-414P-201ENST00000363705 104 ntBASIC3.15□□□□□ -1.91
HCN4Q9Y3Q4 U8.6-201ENST00000364939 135 ntBASIC3.15□□□□□ -1.91
HCN4Q9Y3Q4 SNORD15B-201ENST00000384714 146 ntBASIC3.15□□□□□ -1.91
HCN4Q9Y3Q4 MT-TI-201ENST00000387365 69 ntBASIC3.15□□□□□ -1.91
HCN4Q9Y3Q4 AL627390.1-201ENST00000396055 340 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms