Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 RNU6-476P-201ENST00000384726 107 ntBASIC2.48□□□□□ -2.01
SF3B6Q9Y3B4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
SF3B6Q9Y3B4 RN7SKP200-201ENST00000410564 320 ntBASIC2.48□□□□□ -2.01
SF3B6Q9Y3B4 Y_RNA.617-201ENST00000410920 90 ntBASIC2.48□□□□□ -2.01
SF3B6Q9Y3B4 RNA5SP501-201ENST00000410990 112 ntBASIC2.48□□□□□ -2.01
SF3B6Q9Y3B4 CALM2P4-201ENST00000430810 426 ntBASIC2.48□□□□□ -2.01
SF3B6Q9Y3B4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.48□□□□□ -2.01
SF3B6Q9Y3B4 AL021397.1-201ENST00000451806 248 ntBASIC2.48□□□□□ -2.01
SF3B6Q9Y3B4 S100A11P2-201ENST00000467589 312 ntBASIC2.48□□□□□ -2.01
SF3B6Q9Y3B4 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
SF3B6Q9Y3B4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.48□□□□□ -2.01
SF3B6Q9Y3B4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SF3B6Q9Y3B4 MIR26A1-201ENST00000362205 77 ntBASIC2.47□□□□□ -2.01
SF3B6Q9Y3B4 Y_RNA.37-201ENST00000362606 108 ntBASIC2.47□□□□□ -2.01
SF3B6Q9Y3B4 RNU6-1189P-201ENST00000383958 107 ntBASIC2.47□□□□□ -2.01
SF3B6Q9Y3B4 SNORA48.1-201ENST00000390879 135 ntBASIC2.47□□□□□ -2.01
SF3B6Q9Y3B4 SNORA48.2-201ENST00000390926 124 ntBASIC2.47□□□□□ -2.01
SF3B6Q9Y3B4 U8.16-201ENST00000391279 133 ntBASIC2.47□□□□□ -2.01
SF3B6Q9Y3B4 RNU2-52P-201ENST00000410680 190 ntBASIC2.47□□□□□ -2.01
SF3B6Q9Y3B4 RNA5SP270-201ENST00000411361 118 ntBASIC2.47□□□□□ -2.01
SF3B6Q9Y3B4 Z92545.1-201ENST00000411782 234 ntBASIC2.47□□□□□ -2.01
SF3B6Q9Y3B4 AL445646.1-201ENST00000431784 216 ntBASIC2.47□□□□□ -2.01
SF3B6Q9Y3B4 HMGN2P32-201ENST00000444648 269 ntBASIC2.47□□□□□ -2.01
SF3B6Q9Y3B4 RN7SKP19-201ENST00000516016 252 ntBASIC2.47□□□□□ -2.01
SF3B6Q9Y3B4 SNORD33.1-201ENST00000516213 88 ntBASIC2.47□□□□□ -2.01
SF3B6Q9Y3B4 SNORD36C-201ENST00000516733 66 ntBASIC2.47□□□□□ -2.01
SF3B6Q9Y3B4 RNA5SP437-201ENST00000517249 129 ntBASIC2.47□□□□□ -2.01
SF3B6Q9Y3B4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.47□□□□□ -2.01
SF3B6Q9Y3B4 AC010297.1-201ENST00000623948 149 ntBASIC2.47□□□□□ -2.01
SF3B6Q9Y3B4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SF3B6Q9Y3B4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
SF3B6Q9Y3B4 RNU6-1144P-201ENST00000384247 104 ntBASIC2.46□□□□□ -2.02
SF3B6Q9Y3B4 RNU6-851P-201ENST00000384565 107 ntBASIC2.46□□□□□ -2.02
SF3B6Q9Y3B4 MIR128-1-201ENST00000384921 82 ntBASIC2.46□□□□□ -2.02
SF3B6Q9Y3B4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SF3B6Q9Y3B4 CYCTP-201ENST00000504253 315 ntBASIC2.46□□□□□ -2.02
SF3B6Q9Y3B4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.46□□□□□ -2.02
SF3B6Q9Y3B4 IGKV1-22-201ENST00000524313 326 ntBASIC2.46□□□□□ -2.02
SF3B6Q9Y3B4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.46□□□□□ -2.02
SF3B6Q9Y3B4 U6.95-201ENST00000636931 70 ntBASIC2.46□□□□□ -2.02
SF3B6Q9Y3B4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.46□□□□□ -2.02
SF3B6Q9Y3B4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SF3B6Q9Y3B4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
SF3B6Q9Y3B4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
SF3B6Q9Y3B4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.45□□□□□ -2.02
SF3B6Q9Y3B4 SNORA3A-201ENST00000364113 130 ntBASIC2.45□□□□□ -2.02
SF3B6Q9Y3B4 SNORA2.2-201ENST00000365473 135 ntBASIC2.45□□□□□ -2.02
SF3B6Q9Y3B4 Y_RNA.410-201ENST00000383992 113 ntBASIC2.45□□□□□ -2.02
SF3B6Q9Y3B4 AL034345.1-201ENST00000407768 123 ntBASIC2.45□□□□□ -2.02
SF3B6Q9Y3B4 RNU2-7P-201ENST00000410794 178 ntBASIC2.45□□□□□ -2.02
SF3B6Q9Y3B4 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.45□□□□□ -2.02
SF3B6Q9Y3B4 RPL23AP63-201ENST00000498752 471 ntBASIC2.45□□□□□ -2.02
SF3B6Q9Y3B4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.45□□□□□ -2.02
SF3B6Q9Y3B4 RNA5SP168-201ENST00000516642 112 ntBASIC2.45□□□□□ -2.02
SF3B6Q9Y3B4 SUB1P4-201ENST00000566062 339 ntBASIC2.45□□□□□ -2.02
SF3B6Q9Y3B4 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.45□□□□□ -2.02
SF3B6Q9Y3B4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
SF3B6Q9Y3B4 AC096644.4-201ENST00000563417 2912 ntBASIC2.45□□□□□ -2.02
SF3B6Q9Y3B4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SF3B6Q9Y3B4 AL365361.1-201ENST00000566942 3481 ntBASIC2.44□□□□□ -2.02
SF3B6Q9Y3B4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
SF3B6Q9Y3B4 MIR520A-201ENST00000384862 85 ntBASIC2.44□□□□□ -2.02
SF3B6Q9Y3B4 MIR23A-201ENST00000385245 73 ntBASIC2.44□□□□□ -2.02
SF3B6Q9Y3B4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.44□□□□□ -2.02
SF3B6Q9Y3B4 RNU6-938P-201ENST00000411285 103 ntBASIC2.44□□□□□ -2.02
SF3B6Q9Y3B4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.44□□□□□ -2.02
SF3B6Q9Y3B4 ZNF861P-201ENST00000588126 639 ntBASIC2.44□□□□□ -2.02
SF3B6Q9Y3B4 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.44□□□□□ -2.02
SF3B6Q9Y3B4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SF3B6Q9Y3B4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.44□□□□□ -2.02
SF3B6Q9Y3B4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
SF3B6Q9Y3B4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
SF3B6Q9Y3B4 RNU6-112P-201ENST00000363599 104 ntBASIC2.43□□□□□ -2.02
SF3B6Q9Y3B4 RNU1-109P-201ENST00000383960 147 ntBASIC2.43□□□□□ -2.02
SF3B6Q9Y3B4 RNU6-424P-201ENST00000384367 105 ntBASIC2.43□□□□□ -2.02
SF3B6Q9Y3B4 SNORD38C-201ENST00000384381 69 ntBASIC2.43□□□□□ -2.02
SF3B6Q9Y3B4 RNU6-296P-201ENST00000384608 107 ntBASIC2.43□□□□□ -2.02
SF3B6Q9Y3B4 RNU6-950P-201ENST00000384651 107 ntBASIC2.43□□□□□ -2.02
SF3B6Q9Y3B4 RNU6-1031P-201ENST00000384773 107 ntBASIC2.43□□□□□ -2.02
SF3B6Q9Y3B4 RNU7-34P-201ENST00000459394 64 ntBASIC2.43□□□□□ -2.02
SF3B6Q9Y3B4 SCARNA16.3-201ENST00000516595 184 ntBASIC2.43□□□□□ -2.02
SF3B6Q9Y3B4 AC027279.3-201ENST00000625055 122 ntBASIC2.43□□□□□ -2.02
SF3B6Q9Y3B4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SF3B6Q9Y3B4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SF3B6Q9Y3B4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.42□□□□□ -2.02
SF3B6Q9Y3B4 MIR6073-201ENST00000352083 89 ntBASIC2.42□□□□□ -2.02
SF3B6Q9Y3B4 MIR1263-201ENST00000408324 86 ntBASIC2.42□□□□□ -2.02
SF3B6Q9Y3B4 AC007064.1-201ENST00000412238 351 ntBASIC2.42□□□□□ -2.02
SF3B6Q9Y3B4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.42□□□□□ -2.02
SF3B6Q9Y3B4 AP003484.1-201ENST00000530974 250 ntBASIC2.42□□□□□ -2.02
SF3B6Q9Y3B4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
SF3B6Q9Y3B4 AC025166.1-201ENST00000612411 163 ntBASIC2.42□□□□□ -2.02
SF3B6Q9Y3B4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SF3B6Q9Y3B4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SF3B6Q9Y3B4 Y_RNA.366-201ENST00000365540 102 ntBASIC2.41□□□□□ -2.02
SF3B6Q9Y3B4 DEFA7P-201ENST00000382676 285 ntBASIC2.41□□□□□ -2.02
SF3B6Q9Y3B4 RNU1-52P-201ENST00000384190 164 ntBASIC2.41□□□□□ -2.02
SF3B6Q9Y3B4 MIRLET7F2-201ENST00000385277 83 ntBASIC2.41□□□□□ -2.02
SF3B6Q9Y3B4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
SF3B6Q9Y3B4 RNY4P18-201ENST00000391107 89 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms