Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.23□□□□□ -1.89
NOD1Q9Y239 RPS29P24-201ENST00000486345 171 ntBASIC3.23□□□□□ -1.89
NOD1Q9Y239 AC114811.1-201ENST00000507207 168 ntBASIC3.23□□□□□ -1.89
NOD1Q9Y239 SNORA18.7-201ENST00000516910 131 ntBASIC3.23□□□□□ -1.89
NOD1Q9Y239 AC084364.2-201ENST00000546924 395 ntBASIC3.23□□□□□ -1.89
NOD1Q9Y239 AC069114.2-201ENST00000604699 304 ntBASIC3.23□□□□□ -1.89
NOD1Q9Y239 AC007318.2-201ENST00000620999 243 ntBASIC3.23□□□□□ -1.89
NOD1Q9Y239 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.23□□□□□ -1.89
NOD1Q9Y239 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
NOD1Q9Y239 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.23□□□□□ -1.89
NOD1Q9Y239 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.22□□□□□ -1.89
NOD1Q9Y239 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NOD1Q9Y239 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NOD1Q9Y239 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
NOD1Q9Y239 Y_RNA.198-201ENST00000364013 98 ntBASIC3.22□□□□□ -1.89
NOD1Q9Y239 RNU1-133P-201ENST00000364867 167 ntBASIC3.22□□□□□ -1.89
NOD1Q9Y239 RNU6-163P-201ENST00000384396 106 ntBASIC3.22□□□□□ -1.89
NOD1Q9Y239 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
NOD1Q9Y239 RN7SL20P-201ENST00000488827 297 ntBASIC3.22□□□□□ -1.89
NOD1Q9Y239 RNU1-143P-201ENST00000516296 146 ntBASIC3.22□□□□□ -1.89
NOD1Q9Y239 RNY4P20-201ENST00000516678 93 ntBASIC3.22□□□□□ -1.89
NOD1Q9Y239 U1.23-201ENST00000610293 146 ntBASIC3.22□□□□□ -1.89
NOD1Q9Y239 RNU1-68P-201ENST00000615382 146 ntBASIC3.22□□□□□ -1.89
NOD1Q9Y239 U1.39-201ENST00000621562 146 ntBASIC3.22□□□□□ -1.89
NOD1Q9Y239 FAM35CP-201ENST00000554755 2470 ntBASIC3.21□□□□□ -1.89
NOD1Q9Y239 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NOD1Q9Y239 AC096644.4-201ENST00000563417 2912 ntBASIC3.21□□□□□ -1.9
NOD1Q9Y239 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
NOD1Q9Y239 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.21□□□□□ -1.9
NOD1Q9Y239 SNORD56.5-201ENST00000364281 72 ntBASIC3.21□□□□□ -1.9
NOD1Q9Y239 RNU6-1019P-201ENST00000364424 107 ntBASIC3.21□□□□□ -1.9
NOD1Q9Y239 RNY1P6-201ENST00000384193 109 ntBASIC3.21□□□□□ -1.9
NOD1Q9Y239 SNORD38C-201ENST00000384381 69 ntBASIC3.21□□□□□ -1.9
NOD1Q9Y239 BX510359.4-201ENST00000423750 193 ntBASIC3.21□□□□□ -1.9
NOD1Q9Y239 AC087499.4-201ENST00000448505 178 ntBASIC3.21□□□□□ -1.9
NOD1Q9Y239 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.21□□□□□ -1.9
NOD1Q9Y239 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.21□□□□□ -1.9
NOD1Q9Y239 Y_RNA.694-201ENST00000516677 117 ntBASIC3.21□□□□□ -1.9
NOD1Q9Y239 AC079600.2-201ENST00000550076 130 ntBASIC3.21□□□□□ -1.9
NOD1Q9Y239 MIR3126-201ENST00000577443 74 ntBASIC3.21□□□□□ -1.9
NOD1Q9Y239 AC021443.1-201ENST00000604478 211 ntBASIC3.21□□□□□ -1.9
NOD1Q9Y239 SNORA28-201ENST00000606769 126 ntBASIC3.21□□□□□ -1.9
NOD1Q9Y239 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NOD1Q9Y239 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
NOD1Q9Y239 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NOD1Q9Y239 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.2□□□□□ -1.9
NOD1Q9Y239 MAPK10-266ENST00000641066 6555 ntBASIC3.2□□□□□ -1.9
NOD1Q9Y239 RNU4-82P-201ENST00000362443 140 ntBASIC3.2□□□□□ -1.9
NOD1Q9Y239 SNORA63.5-201ENST00000363548 123 ntBASIC3.2□□□□□ -1.9
NOD1Q9Y239 Y_RNA.351-201ENST00000365436 96 ntBASIC3.2□□□□□ -1.9
NOD1Q9Y239 AC108938.1-201ENST00000451204 136 ntBASIC3.2□□□□□ -1.9
NOD1Q9Y239 SNORD109B-201ENST00000458961 67 ntBASIC3.2□□□□□ -1.9
NOD1Q9Y239 SNORD109A-201ENST00000459128 67 ntBASIC3.2□□□□□ -1.9
NOD1Q9Y239 Y_RNA.677-201ENST00000516401 85 ntBASIC3.2□□□□□ -1.9
NOD1Q9Y239 RNU6-1116P-201ENST00000517269 99 ntBASIC3.2□□□□□ -1.9
NOD1Q9Y239 RNU6-537P-201ENST00000517277 103 ntBASIC3.2□□□□□ -1.9
NOD1Q9Y239 AC006254.2-201ENST00000603259 279 ntBASIC3.2□□□□□ -1.9
NOD1Q9Y239 AC009831.4-201ENST00000620744 325 ntBASIC3.2□□□□□ -1.9
NOD1Q9Y239 AL035470.1-201ENST00000622571 220 ntBASIC3.2□□□□□ -1.9
NOD1Q9Y239 MIR4679-1-201ENST00000637619 75 ntBASIC3.2□□□□□ -1.9
NOD1Q9Y239 MIR7153-201ENST00000637758 57 ntBASIC3.2□□□□□ -1.9
NOD1Q9Y239 AC008264.2-201ENST00000610193 3731 ntBASIC3.2□□□□□ -1.9
NOD1Q9Y239 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.19□□□□□ -1.9
NOD1Q9Y239 Y_RNA.213-201ENST00000364178 111 ntBASIC3.19□□□□□ -1.9
NOD1Q9Y239 MIR759-201ENST00000390224 91 ntBASIC3.19□□□□□ -1.9
NOD1Q9Y239 U8.17-201ENST00000391292 132 ntBASIC3.19□□□□□ -1.9
NOD1Q9Y239 RNU7-26P-201ENST00000458980 63 ntBASIC3.19□□□□□ -1.9
NOD1Q9Y239 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
NOD1Q9Y239 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.19□□□□□ -1.9
NOD1Q9Y239 MIR5094-201ENST00000578766 85 ntBASIC3.19□□□□□ -1.9
NOD1Q9Y239 AC106754.2-201ENST00000623006 233 ntBASIC3.19□□□□□ -1.9
NOD1Q9Y239 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NOD1Q9Y239 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NOD1Q9Y239 AL589743.1-201ENST00000551932 2712 ntBASIC3.18□□□□□ -1.9
NOD1Q9Y239 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.18□□□□□ -1.9
NOD1Q9Y239 RNY4P6-201ENST00000363667 96 ntBASIC3.18□□□□□ -1.9
NOD1Q9Y239 Y_RNA.163-201ENST00000363702 113 ntBASIC3.18□□□□□ -1.9
NOD1Q9Y239 MIR181B1-201ENST00000385240 110 ntBASIC3.18□□□□□ -1.9
NOD1Q9Y239 RNA5SP508-201ENST00000411327 119 ntBASIC3.18□□□□□ -1.9
NOD1Q9Y239 RNU7-80P-201ENST00000459562 61 ntBASIC3.18□□□□□ -1.9
NOD1Q9Y239 SNORA31.10-201ENST00000516482 106 ntBASIC3.18□□□□□ -1.9
NOD1Q9Y239 AC002984.1-201ENST00000591692 448 ntBASIC3.18□□□□□ -1.9
NOD1Q9Y239 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.18□□□□□ -1.9
NOD1Q9Y239 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NOD1Q9Y239 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NOD1Q9Y239 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NOD1Q9Y239 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
NOD1Q9Y239 AL596211.1-201ENST00000569873 2277 ntBASIC3.17□□□□□ -1.9
NOD1Q9Y239 MIRLET7C-201ENST00000362160 84 ntBASIC3.17□□□□□ -1.9
NOD1Q9Y239 Y_RNA.49-201ENST00000362714 112 ntBASIC3.17□□□□□ -1.9
NOD1Q9Y239 RNU6-414P-201ENST00000363705 104 ntBASIC3.17□□□□□ -1.9
NOD1Q9Y239 RNU1-148P-201ENST00000384472 162 ntBASIC3.17□□□□□ -1.9
NOD1Q9Y239 MIR1302-5-201ENST00000408164 150 ntBASIC3.17□□□□□ -1.9
NOD1Q9Y239 SUMO2P16-201ENST00000519475 264 ntBASIC3.17□□□□□ -1.9
NOD1Q9Y239 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.17□□□□□ -1.9
NOD1Q9Y239 AC104027.1-201ENST00000521887 300 ntBASIC3.17□□□□□ -1.9
NOD1Q9Y239 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.17□□□□□ -1.9
NOD1Q9Y239 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NOD1Q9Y239 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NOD1Q9Y239 SNORA38-201ENST00000363946 132 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 212.5 ms