Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AP002371.2-201ENST00000624450 503 ntBASIC-1.21□□□□□ -2.6
SHANK2Q9UPX8 AC126544.2-201ENST00000625174 749 ntBASIC-1.21□□□□□ -2.6
SHANK2Q9UPX8 U6.115-201ENST00000636045 103 ntBASIC-1.21□□□□□ -2.6
SHANK2Q9UPX8 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.22□□□□□ -2.6
SHANK2Q9UPX8 RNU6-784P-201ENST00000384330 106 ntBASIC-1.22□□□□□ -2.6
SHANK2Q9UPX8 SNORD12C-201ENST00000386307 89 ntBASIC-1.22□□□□□ -2.6
SHANK2Q9UPX8 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.22□□□□□ -2.6
SHANK2Q9UPX8 SNORD110-201ENST00000408189 75 ntBASIC-1.22□□□□□ -2.6
SHANK2Q9UPX8 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-1.22□□□□□ -2.6
SHANK2Q9UPX8 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1.22□□□□□ -2.6
SHANK2Q9UPX8 GMFBP1-201ENST00000467831 427 ntBASIC-1.22□□□□□ -2.6
SHANK2Q9UPX8 AC105417.1-201ENST00000514691 285 ntBASIC-1.22□□□□□ -2.6
SHANK2Q9UPX8 RNU6-1198P-201ENST00000516904 67 ntBASIC-1.22□□□□□ -2.6
SHANK2Q9UPX8 AC009248.2-201ENST00000619826 254 ntBASIC-1.22□□□□□ -2.6
SHANK2Q9UPX8 SNORD114-25-201ENST00000363742 72 ntBASIC-1.23□□□□□ -2.61
SHANK2Q9UPX8 RNA5SP245-201ENST00000364239 121 ntBASIC-1.23□□□□□ -2.61
SHANK2Q9UPX8 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.23□□□□□ -2.61
SHANK2Q9UPX8 RNU6-455P-201ENST00000384681 107 ntBASIC-1.23□□□□□ -2.61
SHANK2Q9UPX8 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.23□□□□□ -2.61
SHANK2Q9UPX8 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.23□□□□□ -2.61
SHANK2Q9UPX8 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.23□□□□□ -2.61
SHANK2Q9UPX8 RPL30P16-201ENST00000419341 429 ntBASIC-1.23□□□□□ -2.61
SHANK2Q9UPX8 SNRPGP14-201ENST00000435400 219 ntBASIC-1.23□□□□□ -2.61
SHANK2Q9UPX8 RNU7-138P-201ENST00000459479 64 ntBASIC-1.23□□□□□ -2.61
SHANK2Q9UPX8 AC104576.1-201ENST00000524225 88 ntBASIC-1.23□□□□□ -2.61
SHANK2Q9UPX8 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.23□□□□□ -2.61
SHANK2Q9UPX8 MIR3684-201ENST00000579779 74 ntBASIC-1.23□□□□□ -2.61
SHANK2Q9UPX8 AC080013.3-201ENST00000606839 578 ntBASIC-1.23□□□□□ -2.61
SHANK2Q9UPX8 AC073869.9-201ENST00000641610 120 ntBASIC-1.23□□□□□ -2.61
SHANK2Q9UPX8 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.24□□□□□ -2.61
SHANK2Q9UPX8 RNU6-541P-201ENST00000384709 110 ntBASIC-1.24□□□□□ -2.61
SHANK2Q9UPX8 RPS27AP14-201ENST00000422868 454 ntBASIC-1.24□□□□□ -2.61
SHANK2Q9UPX8 AC006210.1-201ENST00000424882 111 ntBASIC-1.24□□□□□ -2.61
SHANK2Q9UPX8 MTND3P1-201ENST00000441336 220 ntBASIC-1.24□□□□□ -2.61
SHANK2Q9UPX8 RNU6-751P-201ENST00000516382 101 ntBASIC-1.24□□□□□ -2.61
SHANK2Q9UPX8 SNORA25.13-201ENST00000516395 103 ntBASIC-1.24□□□□□ -2.61
SHANK2Q9UPX8 SNORD115-2-201ENST00000362842 82 ntBASIC-1.24□□□□□ -2.61
SHANK2Q9UPX8 RNU6-280P-201ENST00000364145 104 ntBASIC-1.24□□□□□ -2.61
SHANK2Q9UPX8 RNU6-268P-201ENST00000364174 107 ntBASIC-1.24□□□□□ -2.61
SHANK2Q9UPX8 RNU6-926P-201ENST00000384075 107 ntBASIC-1.24□□□□□ -2.61
SHANK2Q9UPX8 MIR521-1-201ENST00000384902 87 ntBASIC-1.24□□□□□ -2.61
SHANK2Q9UPX8 RNU6-602P-201ENST00000411155 105 ntBASIC-1.24□□□□□ -2.61
SHANK2Q9UPX8 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-1.24□□□□□ -2.61
SHANK2Q9UPX8 UQCRBP2-201ENST00000447827 297 ntBASIC-1.24□□□□□ -2.61
SHANK2Q9UPX8 RNU7-167P-201ENST00000459160 62 ntBASIC-1.24□□□□□ -2.61
SHANK2Q9UPX8 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.24□□□□□ -2.61
SHANK2Q9UPX8 MTND1P24-201ENST00000552175 861 ntBASIC-1.24□□□□□ -2.61
SHANK2Q9UPX8 AC090616.2-202ENST00000584248 222 ntBASIC-1.24□□□□□ -2.61
SHANK2Q9UPX8 Y_RNA.302-201ENST00000364997 102 ntBASIC-1.25□□□□□ -2.61
SHANK2Q9UPX8 Y_RNA.399-201ENST00000383955 105 ntBASIC-1.25□□□□□ -2.61
SHANK2Q9UPX8 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.25□□□□□ -2.61
SHANK2Q9UPX8 SNORA72.6-201ENST00000384520 129 ntBASIC-1.25□□□□□ -2.61
SHANK2Q9UPX8 RNU6-913P-201ENST00000390913 95 ntBASIC-1.25□□□□□ -2.61
SHANK2Q9UPX8 RNU6-159P-201ENST00000391080 106 ntBASIC-1.25□□□□□ -2.61
SHANK2Q9UPX8 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.25□□□□□ -2.61
SHANK2Q9UPX8 AL590002.1-201ENST00000406554 418 ntBASIC-1.25□□□□□ -2.61
SHANK2Q9UPX8 Y_RNA.608-201ENST00000410647 95 ntBASIC-1.25□□□□□ -2.61
SHANK2Q9UPX8 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.25□□□□□ -2.61
SHANK2Q9UPX8 MTATP6P18-201ENST00000417994 673 ntBASIC-1.25□□□□□ -2.61
SHANK2Q9UPX8 RPL39P25-201ENST00000449384 154 ntBASIC-1.25□□□□□ -2.61
SHANK2Q9UPX8 RNU7-67P-201ENST00000459003 62 ntBASIC-1.25□□□□□ -2.61
SHANK2Q9UPX8 RNU2-11P-201ENST00000459191 187 ntBASIC-1.25□□□□□ -2.61
SHANK2Q9UPX8 AC016550.1-201ENST00000505348 785 ntBASIC-1.25□□□□□ -2.61
SHANK2Q9UPX8 RNU6-765P-201ENST00000516916 99 ntBASIC-1.25□□□□□ -2.61
SHANK2Q9UPX8 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.25□□□□□ -2.61
SHANK2Q9UPX8 SCOCP1-201ENST00000554676 349 ntBASIC-1.25□□□□□ -2.61
SHANK2Q9UPX8 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.25□□□□□ -2.61
SHANK2Q9UPX8 MIR4703-201ENST00000577728 79 ntBASIC-1.25□□□□□ -2.61
SHANK2Q9UPX8 MIR8055-201ENST00000610739 97 ntBASIC-1.25□□□□□ -2.61
SHANK2Q9UPX8 SEPT14P19-203ENST00000633205 211 ntBASIC-1.25□□□□□ -2.61
SHANK2Q9UPX8 Z97988.1-201ENST00000637697 135 ntBASIC-1.25□□□□□ -2.61
SHANK2Q9UPX8 RNU4-36P-201ENST00000364294 144 ntBASIC-1.26□□□□□ -2.61
SHANK2Q9UPX8 RNU6-442P-201ENST00000383968 104 ntBASIC-1.26□□□□□ -2.61
SHANK2Q9UPX8 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-1.26□□□□□ -2.61
SHANK2Q9UPX8 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.26□□□□□ -2.61
SHANK2Q9UPX8 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.26□□□□□ -2.61
SHANK2Q9UPX8 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.26□□□□□ -2.61
SHANK2Q9UPX8 RNU6-958P-201ENST00000516995 106 ntBASIC-1.26□□□□□ -2.61
SHANK2Q9UPX8 AC005972.2-201ENST00000604690 348 ntBASIC-1.26□□□□□ -2.61
SHANK2Q9UPX8 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.27□□□□□ -2.61
SHANK2Q9UPX8 SNORA63.5-201ENST00000363548 123 ntBASIC-1.27□□□□□ -2.61
SHANK2Q9UPX8 SNORA24-201ENST00000384096 131 ntBASIC-1.27□□□□□ -2.61
SHANK2Q9UPX8 Y_RNA.494-201ENST00000384432 111 ntBASIC-1.27□□□□□ -2.61
SHANK2Q9UPX8 RNU6-606P-201ENST00000384721 111 ntBASIC-1.27□□□□□ -2.61
SHANK2Q9UPX8 AC010655.3-201ENST00000478818 450 ntBASIC-1.27□□□□□ -2.61
SHANK2Q9UPX8 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-1.27□□□□□ -2.61
SHANK2Q9UPX8 RNA5SP180-201ENST00000516181 101 ntBASIC-1.27□□□□□ -2.61
SHANK2Q9UPX8 RNU7-188P-201ENST00000517063 64 ntBASIC-1.27□□□□□ -2.61
SHANK2Q9UPX8 MIR4491-201ENST00000581087 68 ntBASIC-1.27□□□□□ -2.61
SHANK2Q9UPX8 MIR3941-201ENST00000582572 103 ntBASIC-1.27□□□□□ -2.61
SHANK2Q9UPX8 AC005828.6-201ENST00000606610 232 ntBASIC-1.27□□□□□ -2.61
SHANK2Q9UPX8 AL049777.1-201ENST00000622740 518 ntBASIC-1.27□□□□□ -2.61
SHANK2Q9UPX8 AC099654.12-201ENST00000639868 649 ntBASIC-1.27□□□□□ -2.61
SHANK2Q9UPX8 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.28□□□□□ -2.61
SHANK2Q9UPX8 AC104850.1-201ENST00000435940 476 ntBASIC-1.28□□□□□ -2.61
SHANK2Q9UPX8 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-1.28□□□□□ -2.61
SHANK2Q9UPX8 AC131281.1-201ENST00000522984 164 ntBASIC-1.28□□□□□ -2.61
SHANK2Q9UPX8 AC024405.2-202ENST00000532731 184 ntBASIC-1.28□□□□□ -2.61
SHANK2Q9UPX8 RNU6-86P-201ENST00000606534 107 ntBASIC-1.28□□□□□ -2.61
SHANK2Q9UPX8 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-1.28□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms