Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 RPL23AP6-201ENST00000446637 472 ntBASIC2.17□□□□□ -2.06
DKK3Q9UBP4 RNU7-94P-201ENST00000459576 63 ntBASIC2.17□□□□□ -2.06
DKK3Q9UBP4 AC107027.2-201ENST00000512197 115 ntBASIC2.17□□□□□ -2.06
DKK3Q9UBP4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.17□□□□□ -2.06
DKK3Q9UBP4 AC005786.1-201ENST00000588553 154 ntBASIC2.17□□□□□ -2.06
DKK3Q9UBP4 Y_RNA.8-201ENST00000362353 102 ntBASIC2.16□□□□□ -2.06
DKK3Q9UBP4 RNU6-23P-201ENST00000363283 107 ntBASIC2.16□□□□□ -2.06
DKK3Q9UBP4 Y_RNA.355-201ENST00000365462 98 ntBASIC2.16□□□□□ -2.06
DKK3Q9UBP4 AL121914.1-201ENST00000450188 156 ntBASIC2.16□□□□□ -2.06
DKK3Q9UBP4 RNA5SP364-201ENST00000516938 78 ntBASIC2.16□□□□□ -2.06
DKK3Q9UBP4 AL096840.1-201ENST00000603287 93 ntBASIC2.16□□□□□ -2.06
DKK3Q9UBP4 MIR6079-201ENST00000635807 62 ntBASIC2.16□□□□□ -2.06
DKK3Q9UBP4 RNU6-862P-201ENST00000362804 105 ntBASIC2.15□□□□□ -2.07
DKK3Q9UBP4 RNU6-1130P-201ENST00000365434 107 ntBASIC2.15□□□□□ -2.07
DKK3Q9UBP4 RNU6-187P-201ENST00000384139 106 ntBASIC2.15□□□□□ -2.07
DKK3Q9UBP4 MIR15B-201ENST00000385045 98 ntBASIC2.15□□□□□ -2.07
DKK3Q9UBP4 MIR613-201ENST00000385248 95 ntBASIC2.15□□□□□ -2.07
DKK3Q9UBP4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.15□□□□□ -2.07
DKK3Q9UBP4 AC099677.2-201ENST00000436385 175 ntBASIC2.15□□□□□ -2.07
DKK3Q9UBP4 SNRPGP8-201ENST00000454064 226 ntBASIC2.15□□□□□ -2.07
DKK3Q9UBP4 AL160236.1-201ENST00000556317 195 ntBASIC2.15□□□□□ -2.07
DKK3Q9UBP4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.15□□□□□ -2.07
DKK3Q9UBP4 AC022513.1-201ENST00000624512 117 ntBASIC2.15□□□□□ -2.07
DKK3Q9UBP4 RNU6-1209P-201ENST00000363655 107 ntBASIC2.14□□□□□ -2.07
DKK3Q9UBP4 Y_RNA.400-201ENST00000383963 111 ntBASIC2.14□□□□□ -2.07
DKK3Q9UBP4 RNU6-643P-201ENST00000384018 107 ntBASIC2.14□□□□□ -2.07
DKK3Q9UBP4 SNORA64-201ENST00000384674 134 ntBASIC2.14□□□□□ -2.07
DKK3Q9UBP4 RNA5SP323-201ENST00000391094 133 ntBASIC2.14□□□□□ -2.07
DKK3Q9UBP4 HMGN2P39-201ENST00000398005 273 ntBASIC2.14□□□□□ -2.07
DKK3Q9UBP4 AC023449.1-201ENST00000454464 154 ntBASIC2.14□□□□□ -2.07
DKK3Q9UBP4 SNORD11-201ENST00000459124 84 ntBASIC2.14□□□□□ -2.07
DKK3Q9UBP4 RNU6-561P-201ENST00000516222 102 ntBASIC2.14□□□□□ -2.07
DKK3Q9UBP4 MIR4299-201ENST00000577899 72 ntBASIC2.14□□□□□ -2.07
DKK3Q9UBP4 AC012493.3-201ENST00000604494 112 ntBASIC2.14□□□□□ -2.07
DKK3Q9UBP4 AC008555.8-201ENST00000623602 2168 ntBASIC2.14□□□□□ -2.07
DKK3Q9UBP4 ZNF355P-201ENST00000427301 3216 ntBASIC2.14□□□□□ -2.07
DKK3Q9UBP4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.14□□□□□ -2.07
DKK3Q9UBP4 SNORA33-201ENST00000363664 130 ntBASIC2.13□□□□□ -2.07
DKK3Q9UBP4 Y_RNA.337-201ENST00000365312 102 ntBASIC2.13□□□□□ -2.07
DKK3Q9UBP4 SNORD116-18-201ENST00000383961 92 ntBASIC2.13□□□□□ -2.07
DKK3Q9UBP4 SNORA8-201ENST00000384574 139 ntBASIC2.13□□□□□ -2.07
DKK3Q9UBP4 Y_RNA.587-201ENST00000391210 103 ntBASIC2.13□□□□□ -2.07
DKK3Q9UBP4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.13□□□□□ -2.07
DKK3Q9UBP4 AL163195.1-201ENST00000496941 348 ntBASIC2.13□□□□□ -2.07
DKK3Q9UBP4 RPL23AP91-201ENST00000569211 455 ntBASIC2.13□□□□□ -2.07
DKK3Q9UBP4 MIR3910-1-201ENST00000580936 111 ntBASIC2.13□□□□□ -2.07
DKK3Q9UBP4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.13□□□□□ -2.07
DKK3Q9UBP4 uc_338.4-201ENST00000616635 176 ntBASIC2.13□□□□□ -2.07
DKK3Q9UBP4 Y_RNA.778-201ENST00000620203 90 ntBASIC2.13□□□□□ -2.07
DKK3Q9UBP4 SNORD45.3-201ENST00000363836 72 ntBASIC2.12□□□□□ -2.07
DKK3Q9UBP4 RNA5SP138-201ENST00000365098 114 ntBASIC2.12□□□□□ -2.07
DKK3Q9UBP4 SNORD77.4-201ENST00000516158 81 ntBASIC2.12□□□□□ -2.07
DKK3Q9UBP4 RNU6-346P-201ENST00000516288 111 ntBASIC2.12□□□□□ -2.07
DKK3Q9UBP4 RNA5SP153-201ENST00000516498 76 ntBASIC2.12□□□□□ -2.07
DKK3Q9UBP4 DNAJC19P2-201ENST00000593340 302 ntBASIC2.12□□□□□ -2.07
DKK3Q9UBP4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.12□□□□□ -2.07
DKK3Q9UBP4 RNU6-704P-201ENST00000364162 103 ntBASIC2.11□□□□□ -2.07
DKK3Q9UBP4 RNU6-1138P-201ENST00000365359 106 ntBASIC2.11□□□□□ -2.07
DKK3Q9UBP4 RNU6-484P-201ENST00000384016 107 ntBASIC2.11□□□□□ -2.07
DKK3Q9UBP4 MIR499A-201ENST00000384903 122 ntBASIC2.11□□□□□ -2.07
DKK3Q9UBP4 AL023284.1-201ENST00000403956 276 ntBASIC2.11□□□□□ -2.07
DKK3Q9UBP4 BX510359.4-201ENST00000423750 193 ntBASIC2.11□□□□□ -2.07
DKK3Q9UBP4 AL445646.1-201ENST00000431784 216 ntBASIC2.11□□□□□ -2.07
DKK3Q9UBP4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.11□□□□□ -2.07
DKK3Q9UBP4 AC104435.1-201ENST00000483483 166 ntBASIC2.11□□□□□ -2.07
DKK3Q9UBP4 HMGN1P7-201ENST00000491722 313 ntBASIC2.11□□□□□ -2.07
DKK3Q9UBP4 RNU6-126P-201ENST00000516685 103 ntBASIC2.11□□□□□ -2.07
DKK3Q9UBP4 AP002004.2-201ENST00000531656 154 ntBASIC2.11□□□□□ -2.07
DKK3Q9UBP4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.11□□□□□ -2.07
DKK3Q9UBP4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
DKK3Q9UBP4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
DKK3Q9UBP4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
DKK3Q9UBP4 SNORD115-3-201ENST00000363100 82 ntBASIC2.1□□□□□ -2.07
DKK3Q9UBP4 RNU6-1080P-201ENST00000383982 107 ntBASIC2.1□□□□□ -2.07
DKK3Q9UBP4 SNORA67.3-201ENST00000384366 140 ntBASIC2.1□□□□□ -2.07
DKK3Q9UBP4 MIR518E-201ENST00000385252 88 ntBASIC2.1□□□□□ -2.07
DKK3Q9UBP4 RNA5SP465-201ENST00000391195 109 ntBASIC2.1□□□□□ -2.07
DKK3Q9UBP4 SNORA26.9-201ENST00000391322 122 ntBASIC2.1□□□□□ -2.07
DKK3Q9UBP4 SNORA79-201ENST00000408376 140 ntBASIC2.1□□□□□ -2.07
DKK3Q9UBP4 MIR1283-2-201ENST00000408621 87 ntBASIC2.1□□□□□ -2.07
DKK3Q9UBP4 TMSB4XP3-201ENST00000445144 114 ntBASIC2.1□□□□□ -2.07
DKK3Q9UBP4 AC233266.1-201ENST00000454518 96 ntBASIC2.1□□□□□ -2.07
DKK3Q9UBP4 RNU6-1291P-201ENST00000516591 104 ntBASIC2.1□□□□□ -2.07
DKK3Q9UBP4 RNU6-197P-201ENST00000516680 100 ntBASIC2.1□□□□□ -2.07
DKK3Q9UBP4 RNU6-295P-201ENST00000516901 104 ntBASIC2.1□□□□□ -2.07
DKK3Q9UBP4 MIR3646-201ENST00000578301 84 ntBASIC2.1□□□□□ -2.07
DKK3Q9UBP4 AL049861.1-201ENST00000603130 150 ntBASIC2.1□□□□□ -2.07
DKK3Q9UBP4 AC242852.1-201ENST00000612151 96 ntBASIC2.1□□□□□ -2.07
DKK3Q9UBP4 JPX_2.1-201ENST00000614161 69 ntBASIC2.1□□□□□ -2.07
DKK3Q9UBP4 AC244015.1-201ENST00000622301 99 ntBASIC2.1□□□□□ -2.07
DKK3Q9UBP4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.1□□□□□ -2.07
DKK3Q9UBP4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
DKK3Q9UBP4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
DKK3Q9UBP4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
DKK3Q9UBP4 Y_RNA.215-201ENST00000364204 112 ntBASIC2.09□□□□□ -2.07
DKK3Q9UBP4 RNU6-1019P-201ENST00000364424 107 ntBASIC2.09□□□□□ -2.07
DKK3Q9UBP4 Y_RNA.253-201ENST00000364562 112 ntBASIC2.09□□□□□ -2.07
DKK3Q9UBP4 Y_RNA.432-201ENST00000384087 111 ntBASIC2.09□□□□□ -2.07
DKK3Q9UBP4 MIR518A2-201ENST00000384966 87 ntBASIC2.09□□□□□ -2.07
DKK3Q9UBP4 Y_RNA.622-201ENST00000411091 108 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms