Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.97□□□□□ -2.09
COL20A1Q9P218 RNA5SP458-201ENST00000516188 119 ntBASIC1.97□□□□□ -2.09
COL20A1Q9P218 SNORA44.1-201ENST00000517031 108 ntBASIC1.97□□□□□ -2.09
COL20A1Q9P218 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.97□□□□□ -2.09
COL20A1Q9P218 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
COL20A1Q9P218 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
COL20A1Q9P218 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
COL20A1Q9P218 MIR126-201ENST00000362291 85 ntBASIC1.96□□□□□ -2.1
COL20A1Q9P218 Y_RNA.83-201ENST00000363005 113 ntBASIC1.96□□□□□ -2.1
COL20A1Q9P218 RNU6-653P-201ENST00000363074 106 ntBASIC1.96□□□□□ -2.1
COL20A1Q9P218 SNORD68-201ENST00000363214 84 ntBASIC1.96□□□□□ -2.1
COL20A1Q9P218 Y_RNA.242-201ENST00000364473 110 ntBASIC1.96□□□□□ -2.1
COL20A1Q9P218 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.96□□□□□ -2.1
COL20A1Q9P218 SNRPGP10-201ENST00000432323 225 ntBASIC1.96□□□□□ -2.1
COL20A1Q9P218 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.96□□□□□ -2.1
COL20A1Q9P218 OR9P1P-201ENST00000496431 281 ntBASIC1.96□□□□□ -2.1
COL20A1Q9P218 MIR514B-201ENST00000516774 80 ntBASIC1.96□□□□□ -2.1
COL20A1Q9P218 AC090425.1-201ENST00000610007 140 ntBASIC1.96□□□□□ -2.1
COL20A1Q9P218 AL591926.4-201ENST00000616895 298 ntBASIC1.96□□□□□ -2.1
COL20A1Q9P218 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
COL20A1Q9P218 MIR626-201ENST00000385032 94 ntBASIC1.95□□□□□ -2.1
COL20A1Q9P218 RNU6-131P-201ENST00000391144 107 ntBASIC1.95□□□□□ -2.1
COL20A1Q9P218 RNA5SP489-201ENST00000410986 109 ntBASIC1.95□□□□□ -2.1
COL20A1Q9P218 JTBP1-201ENST00000441314 247 ntBASIC1.95□□□□□ -2.1
COL20A1Q9P218 RNA5SP364-201ENST00000516938 78 ntBASIC1.95□□□□□ -2.1
COL20A1Q9P218 AC130289.1-201ENST00000577321 73 ntBASIC1.95□□□□□ -2.1
COL20A1Q9P218 MIR3935-201ENST00000583472 104 ntBASIC1.95□□□□□ -2.1
COL20A1Q9P218 AC087685.1-201ENST00000587507 141 ntBASIC1.95□□□□□ -2.1
COL20A1Q9P218 AL096840.1-201ENST00000603287 93 ntBASIC1.95□□□□□ -2.1
COL20A1Q9P218 Z83818.1-201ENST00000603584 150 ntBASIC1.95□□□□□ -2.1
COL20A1Q9P218 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.95□□□□□ -2.1
COL20A1Q9P218 uc_338.20-201ENST00000621563 178 ntBASIC1.95□□□□□ -2.1
COL20A1Q9P218 AL513423.1-201ENST00000621695 132 ntBASIC1.95□□□□□ -2.1
COL20A1Q9P218 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
COL20A1Q9P218 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.94□□□□□ -2.1
COL20A1Q9P218 AC068700.1-201ENST00000565862 3754 ntBASIC1.94□□□□□ -2.1
COL20A1Q9P218 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
COL20A1Q9P218 MIR411-201ENST00000362239 96 ntBASIC1.94□□□□□ -2.1
COL20A1Q9P218 RNU6-1209P-201ENST00000363655 107 ntBASIC1.94□□□□□ -2.1
COL20A1Q9P218 Y_RNA.796-201ENST00000364268 102 ntBASIC1.94□□□□□ -2.1
COL20A1Q9P218 U8.5-201ENST00000364528 136 ntBASIC1.94□□□□□ -2.1
COL20A1Q9P218 SNORD48-201ENST00000364953 64 ntBASIC1.94□□□□□ -2.1
COL20A1Q9P218 Y_RNA.799-201ENST00000364992 102 ntBASIC1.94□□□□□ -2.1
COL20A1Q9P218 RNU6-969P-201ENST00000383900 105 ntBASIC1.94□□□□□ -2.1
COL20A1Q9P218 MIR1267-201ENST00000408723 78 ntBASIC1.94□□□□□ -2.1
COL20A1Q9P218 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.94□□□□□ -2.1
COL20A1Q9P218 HMGN2P19-201ENST00000425149 265 ntBASIC1.94□□□□□ -2.1
COL20A1Q9P218 Z98949.2-201ENST00000440996 144 ntBASIC1.94□□□□□ -2.1
COL20A1Q9P218 PGBD4P5-201ENST00000445958 426 ntBASIC1.94□□□□□ -2.1
COL20A1Q9P218 CBX3P4-201ENST00000538909 354 ntBASIC1.94□□□□□ -2.1
COL20A1Q9P218 RPL23AP91-201ENST00000569211 455 ntBASIC1.94□□□□□ -2.1
COL20A1Q9P218 MIR4303-201ENST00000581299 66 ntBASIC1.94□□□□□ -2.1
COL20A1Q9P218 MIR4762-201ENST00000585261 75 ntBASIC1.94□□□□□ -2.1
COL20A1Q9P218 AC021506.2-201ENST00000612354 169 ntBASIC1.94□□□□□ -2.1
COL20A1Q9P218 MIR8074-201ENST00000615081 81 ntBASIC1.94□□□□□ -2.1
COL20A1Q9P218 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
COL20A1Q9P218 RNU6-1123P-201ENST00000362347 106 ntBASIC1.93□□□□□ -2.1
COL20A1Q9P218 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
COL20A1Q9P218 SUMO2P12-201ENST00000405924 140 ntBASIC1.93□□□□□ -2.1
COL20A1Q9P218 RNU6-383P-201ENST00000410864 94 ntBASIC1.93□□□□□ -2.1
COL20A1Q9P218 MLLT10P1-201ENST00000418346 262 ntBASIC1.93□□□□□ -2.1
COL20A1Q9P218 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
COL20A1Q9P218 AL359851.1-201ENST00000569460 4997 ntBASIC1.92□□□□□ -2.1
COL20A1Q9P218 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
COL20A1Q9P218 Y_RNA.24-201ENST00000362508 103 ntBASIC1.92□□□□□ -2.1
COL20A1Q9P218 Y_RNA.274-201ENST00000364714 101 ntBASIC1.92□□□□□ -2.1
COL20A1Q9P218 Y_RNA.297-201ENST00000364950 91 ntBASIC1.92□□□□□ -2.1
COL20A1Q9P218 RNU4-17P-201ENST00000365598 141 ntBASIC1.92□□□□□ -2.1
COL20A1Q9P218 Y_RNA.785-201ENST00000384290 109 ntBASIC1.92□□□□□ -2.1
COL20A1Q9P218 MIR522-201ENST00000385071 87 ntBASIC1.92□□□□□ -2.1
COL20A1Q9P218 AL138752.1-201ENST00000452964 351 ntBASIC1.92□□□□□ -2.1
COL20A1Q9P218 CYCTP-201ENST00000504253 315 ntBASIC1.92□□□□□ -2.1
COL20A1Q9P218 RNU6-138P-201ENST00000515952 107 ntBASIC1.92□□□□□ -2.1
COL20A1Q9P218 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
COL20A1Q9P218 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.92□□□□□ -2.1
COL20A1Q9P218 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.91□□□□□ -2.1
COL20A1Q9P218 MIR424-201ENST00000362227 98 ntBASIC1.91□□□□□ -2.1
COL20A1Q9P218 RNU6-1084P-201ENST00000362498 107 ntBASIC1.91□□□□□ -2.1
COL20A1Q9P218 RNU4-10P-201ENST00000364383 140 ntBASIC1.91□□□□□ -2.1
COL20A1Q9P218 RNU6-424P-201ENST00000384367 105 ntBASIC1.91□□□□□ -2.1
COL20A1Q9P218 RNU4-62P-201ENST00000410125 130 ntBASIC1.91□□□□□ -2.1
COL20A1Q9P218 RN7SKP101-201ENST00000411376 320 ntBASIC1.91□□□□□ -2.1
COL20A1Q9P218 AC099513.1-201ENST00000490423 301 ntBASIC1.91□□□□□ -2.1
COL20A1Q9P218 RN7SKP164-201ENST00000516138 266 ntBASIC1.91□□□□□ -2.1
COL20A1Q9P218 RNA5SP168-201ENST00000516642 112 ntBASIC1.91□□□□□ -2.1
COL20A1Q9P218 MIR3668-201ENST00000582138 75 ntBASIC1.91□□□□□ -2.1
COL20A1Q9P218 AC103810.8-201ENST00000607347 118 ntBASIC1.91□□□□□ -2.1
COL20A1Q9P218 AC027279.3-201ENST00000625055 122 ntBASIC1.91□□□□□ -2.1
COL20A1Q9P218 snoU2-30.1-201ENST00000365012 70 ntBASIC1.9□□□□□ -2.11
COL20A1Q9P218 Y_RNA.308-201ENST00000365043 101 ntBASIC1.9□□□□□ -2.11
COL20A1Q9P218 Y_RNA.435-201ENST00000384095 112 ntBASIC1.9□□□□□ -2.11
COL20A1Q9P218 RNU6-163P-201ENST00000384396 106 ntBASIC1.9□□□□□ -2.11
COL20A1Q9P218 MIR30A-201ENST00000385092 71 ntBASIC1.9□□□□□ -2.11
COL20A1Q9P218 MIR676-201ENST00000390702 67 ntBASIC1.9□□□□□ -2.11
COL20A1Q9P218 RNU2-40P-201ENST00000410833 196 ntBASIC1.9□□□□□ -2.11
COL20A1Q9P218 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.9□□□□□ -2.11
COL20A1Q9P218 AC120024.3-201ENST00000603167 156 ntBASIC1.9□□□□□ -2.11
COL20A1Q9P218 MIR502-201ENST00000606349 86 ntBASIC1.9□□□□□ -2.11
COL20A1Q9P218 AL021707.8-201ENST00000609428 183 ntBASIC1.9□□□□□ -2.11
COL20A1Q9P218 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 223.7 ms