Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 MIR6817-201ENST00000615588 66 ntBASIC3.09□□□□□ -1.91
CXXC1Q9P0U4 MIR7111-201ENST00000619751 72 ntBASIC3.09□□□□□ -1.91
CXXC1Q9P0U4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CXXC1Q9P0U4 ICE2P2-201ENST00000483823 2787 ntBASIC3.09□□□□□ -1.92
CXXC1Q9P0U4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
CXXC1Q9P0U4 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CXXC1Q9P0U4 SNORD115-28-201ENST00000363931 81 ntBASIC3.08□□□□□ -1.92
CXXC1Q9P0U4 RNU6-1189P-201ENST00000383958 107 ntBASIC3.08□□□□□ -1.92
CXXC1Q9P0U4 RNU6-163P-201ENST00000384396 106 ntBASIC3.08□□□□□ -1.92
CXXC1Q9P0U4 MIR9-1-201ENST00000385198 89 ntBASIC3.08□□□□□ -1.92
CXXC1Q9P0U4 RPL21P3-201ENST00000395517 478 ntBASIC3.08□□□□□ -1.92
CXXC1Q9P0U4 AL138827.1-201ENST00000402666 306 ntBASIC3.08□□□□□ -1.92
CXXC1Q9P0U4 AC007064.1-201ENST00000412238 351 ntBASIC3.08□□□□□ -1.92
CXXC1Q9P0U4 CYCTP-201ENST00000504253 315 ntBASIC3.08□□□□□ -1.92
CXXC1Q9P0U4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.08□□□□□ -1.92
CXXC1Q9P0U4 RN7SKP19-201ENST00000516016 252 ntBASIC3.08□□□□□ -1.92
CXXC1Q9P0U4 SNORD33.1-201ENST00000516213 88 ntBASIC3.08□□□□□ -1.92
CXXC1Q9P0U4 RNU6-429P-201ENST00000384582 108 ntBASIC3.07□□□□□ -1.92
CXXC1Q9P0U4 MIR548A3-201ENST00000385297 97 ntBASIC3.07□□□□□ -1.92
CXXC1Q9P0U4 Y_RNA.630-201ENST00000411370 108 ntBASIC3.07□□□□□ -1.92
CXXC1Q9P0U4 RNA5SP148-201ENST00000516527 94 ntBASIC3.07□□□□□ -1.92
CXXC1Q9P0U4 SNORA31.26-201ENST00000517250 137 ntBASIC3.07□□□□□ -1.92
CXXC1Q9P0U4 MIR4658-201ENST00000584344 65 ntBASIC3.07□□□□□ -1.92
CXXC1Q9P0U4 AL121890.5-201ENST00000620848 304 ntBASIC3.07□□□□□ -1.92
CXXC1Q9P0U4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CXXC1Q9P0U4 AL391516.1-201ENST00000554380 2449 ntBASIC3.07□□□□□ -1.92
CXXC1Q9P0U4 SNORD38C-201ENST00000384381 69 ntBASIC3.06□□□□□ -1.92
CXXC1Q9P0U4 Y_RNA.547-201ENST00000384654 119 ntBASIC3.06□□□□□ -1.92
CXXC1Q9P0U4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CXXC1Q9P0U4 MIR764-201ENST00000390811 85 ntBASIC3.06□□□□□ -1.92
CXXC1Q9P0U4 AL034345.1-201ENST00000407768 123 ntBASIC3.06□□□□□ -1.92
CXXC1Q9P0U4 AL445646.1-201ENST00000431784 216 ntBASIC3.06□□□□□ -1.92
CXXC1Q9P0U4 AL591806.2-201ENST00000433122 173 ntBASIC3.06□□□□□ -1.92
CXXC1Q9P0U4 RNU7-70P-201ENST00000516941 66 ntBASIC3.06□□□□□ -1.92
CXXC1Q9P0U4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.06□□□□□ -1.92
CXXC1Q9P0U4 AC025166.1-201ENST00000612411 163 ntBASIC3.06□□□□□ -1.92
CXXC1Q9P0U4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.06□□□□□ -1.92
CXXC1Q9P0U4 AC015726.2-201ENST00000620112 122 ntBASIC3.06□□□□□ -1.92
CXXC1Q9P0U4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.05□□□□□ -1.92
CXXC1Q9P0U4 SNORA2.2-201ENST00000365473 135 ntBASIC3.05□□□□□ -1.92
CXXC1Q9P0U4 MIR518A2-201ENST00000384966 87 ntBASIC3.05□□□□□ -1.92
CXXC1Q9P0U4 SNRPGP14-201ENST00000435400 219 ntBASIC3.05□□□□□ -1.92
CXXC1Q9P0U4 RNU1-143P-201ENST00000516296 146 ntBASIC3.05□□□□□ -1.92
CXXC1Q9P0U4 RNU6-781P-201ENST00000516377 101 ntBASIC3.05□□□□□ -1.92
CXXC1Q9P0U4 SCARNA15-202ENST00000516881 127 ntBASIC3.05□□□□□ -1.92
CXXC1Q9P0U4 AC108081.1-201ENST00000604358 221 ntBASIC3.05□□□□□ -1.92
CXXC1Q9P0U4 U1.23-201ENST00000610293 146 ntBASIC3.05□□□□□ -1.92
CXXC1Q9P0U4 RNU1-68P-201ENST00000615382 146 ntBASIC3.05□□□□□ -1.92
CXXC1Q9P0U4 U1.39-201ENST00000621562 146 ntBASIC3.05□□□□□ -1.92
CXXC1Q9P0U4 AC008264.2-201ENST00000610193 3731 ntBASIC3.05□□□□□ -1.92
CXXC1Q9P0U4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CXXC1Q9P0U4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CXXC1Q9P0U4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.04□□□□□ -1.92
CXXC1Q9P0U4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CXXC1Q9P0U4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CXXC1Q9P0U4 Y_RNA.37-201ENST00000362606 108 ntBASIC3.04□□□□□ -1.92
CXXC1Q9P0U4 MIR1283-2-201ENST00000408621 87 ntBASIC3.04□□□□□ -1.92
CXXC1Q9P0U4 HMGN2P3-201ENST00000433603 273 ntBASIC3.04□□□□□ -1.92
CXXC1Q9P0U4 HMGN2P5-201ENST00000436882 273 ntBASIC3.04□□□□□ -1.92
CXXC1Q9P0U4 HMGN1P18-201ENST00000457642 277 ntBASIC3.04□□□□□ -1.92
CXXC1Q9P0U4 AC114811.1-201ENST00000507207 168 ntBASIC3.04□□□□□ -1.92
CXXC1Q9P0U4 Y_RNA.709-201ENST00000516952 92 ntBASIC3.04□□□□□ -1.92
CXXC1Q9P0U4 AC004486.1-201ENST00000546846 233 ntBASIC3.04□□□□□ -1.92
CXXC1Q9P0U4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.04□□□□□ -1.92
CXXC1Q9P0U4 AC027279.3-201ENST00000625055 122 ntBASIC3.04□□□□□ -1.92
CXXC1Q9P0U4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
CXXC1Q9P0U4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.03□□□□□ -1.92
CXXC1Q9P0U4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.03□□□□□ -1.92
CXXC1Q9P0U4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.03□□□□□ -1.92
CXXC1Q9P0U4 RNA5SP21-201ENST00000410917 96 ntBASIC3.03□□□□□ -1.92
CXXC1Q9P0U4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.03□□□□□ -1.92
CXXC1Q9P0U4 RPS27P29-201ENST00000463110 252 ntBASIC3.03□□□□□ -1.92
CXXC1Q9P0U4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.03□□□□□ -1.92
CXXC1Q9P0U4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.93
CXXC1Q9P0U4 AC108206.1-201ENST00000570186 4159 ntBASIC3.02□□□□□ -1.93
CXXC1Q9P0U4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CXXC1Q9P0U4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CXXC1Q9P0U4 RNY4P18-201ENST00000391107 89 ntBASIC3.02□□□□□ -1.93
CXXC1Q9P0U4 HMGN2P39-201ENST00000398005 273 ntBASIC3.02□□□□□ -1.93
CXXC1Q9P0U4 RNU2-7P-201ENST00000410794 178 ntBASIC3.02□□□□□ -1.93
CXXC1Q9P0U4 RNA5SP270-201ENST00000411361 118 ntBASIC3.02□□□□□ -1.93
CXXC1Q9P0U4 AC087499.4-201ENST00000448505 178 ntBASIC3.02□□□□□ -1.93
CXXC1Q9P0U4 SNORA31.10-201ENST00000516482 106 ntBASIC3.02□□□□□ -1.93
CXXC1Q9P0U4 AC104027.1-201ENST00000521887 300 ntBASIC3.02□□□□□ -1.93
CXXC1Q9P0U4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CXXC1Q9P0U4 RNU6-153P-201ENST00000364422 104 ntBASIC3.01□□□□□ -1.93
CXXC1Q9P0U4 SNORD116-21-201ENST00000384507 92 ntBASIC3.01□□□□□ -1.93
CXXC1Q9P0U4 MIR520A-201ENST00000384862 85 ntBASIC3.01□□□□□ -1.93
CXXC1Q9P0U4 MIRLET7F2-201ENST00000385277 83 ntBASIC3.01□□□□□ -1.93
CXXC1Q9P0U4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CXXC1Q9P0U4 MIR1263-201ENST00000408324 86 ntBASIC3.01□□□□□ -1.93
CXXC1Q9P0U4 RNA5SP492-201ENST00000411330 114 ntBASIC3.01□□□□□ -1.93
CXXC1Q9P0U4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.01□□□□□ -1.93
CXXC1Q9P0U4 PDCD5P2-201ENST00000507570 312 ntBASIC3.01□□□□□ -1.93
CXXC1Q9P0U4 RNU6-589P-201ENST00000516485 107 ntBASIC3.01□□□□□ -1.93
CXXC1Q9P0U4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.01□□□□□ -1.93
CXXC1Q9P0U4 AL137067.1-201ENST00000615933 120 ntBASIC3.01□□□□□ -1.93
CXXC1Q9P0U4 MIR376A2-201ENST00000636782 80 ntBASIC3.01□□□□□ -1.93
CXXC1Q9P0U4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.01□□□□□ -1.93
CXXC1Q9P0U4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms