Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 SNORA25.15-201ENST00000516487 89 ntBASIC1.35□□□□□ -2.19
NDE1Q9NXR1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.35□□□□□ -2.19
NDE1Q9NXR1 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.35□□□□□ -2.19
NDE1Q9NXR1 SNORD53B-201ENST00000577887 78 ntBASIC1.35□□□□□ -2.19
NDE1Q9NXR1 MIR3128-201ENST00000581957 66 ntBASIC1.35□□□□□ -2.19
NDE1Q9NXR1 RNU6-661P-201ENST00000362409 107 ntBASIC1.34□□□□□ -2.19
NDE1Q9NXR1 Y_RNA.60-201ENST00000362831 98 ntBASIC1.34□□□□□ -2.19
NDE1Q9NXR1 Y_RNA.293-201ENST00000364908 93 ntBASIC1.34□□□□□ -2.19
NDE1Q9NXR1 Y_RNA.352-201ENST00000365439 102 ntBASIC1.34□□□□□ -2.19
NDE1Q9NXR1 Y_RNA.562-201ENST00000384695 113 ntBASIC1.34□□□□□ -2.19
NDE1Q9NXR1 U8.16-201ENST00000391279 133 ntBASIC1.34□□□□□ -2.19
NDE1Q9NXR1 AL627390.1-201ENST00000396055 340 ntBASIC1.34□□□□□ -2.19
NDE1Q9NXR1 AL034345.1-201ENST00000407768 123 ntBASIC1.34□□□□□ -2.19
NDE1Q9NXR1 MIR1323-201ENST00000408090 73 ntBASIC1.34□□□□□ -2.19
NDE1Q9NXR1 MIR1267-201ENST00000408723 78 ntBASIC1.34□□□□□ -2.19
NDE1Q9NXR1 Y_RNA.590-201ENST00000410140 107 ntBASIC1.34□□□□□ -2.19
NDE1Q9NXR1 RNU6-383P-201ENST00000410864 94 ntBASIC1.34□□□□□ -2.19
NDE1Q9NXR1 AL354695.1-201ENST00000427935 228 ntBASIC1.34□□□□□ -2.19
NDE1Q9NXR1 JTBP1-201ENST00000441314 247 ntBASIC1.34□□□□□ -2.19
NDE1Q9NXR1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.34□□□□□ -2.19
NDE1Q9NXR1 RNU7-116P-201ENST00000516940 62 ntBASIC1.34□□□□□ -2.19
NDE1Q9NXR1 SNORA44.1-201ENST00000517031 108 ntBASIC1.34□□□□□ -2.19
NDE1Q9NXR1 MIR4778-201ENST00000577635 80 ntBASIC1.34□□□□□ -2.19
NDE1Q9NXR1 MIR5692C2-201ENST00000577959 77 ntBASIC1.34□□□□□ -2.19
NDE1Q9NXR1 AL162424.1-201ENST00000602325 221 ntBASIC1.34□□□□□ -2.19
NDE1Q9NXR1 MIR8081-201ENST00000611533 95 ntBASIC1.34□□□□□ -2.19
NDE1Q9NXR1 AL078604.3-201ENST00000615580 211 ntBASIC1.34□□□□□ -2.19
NDE1Q9NXR1 AC013791.1-201ENST00000616619 62 ntBASIC1.34□□□□□ -2.19
NDE1Q9NXR1 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.34□□□□□ -2.19
NDE1Q9NXR1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.2
NDE1Q9NXR1 Y_RNA.76-201ENST00000362931 109 ntBASIC1.33□□□□□ -2.2
NDE1Q9NXR1 RNU6-1205P-201ENST00000363625 106 ntBASIC1.33□□□□□ -2.2
NDE1Q9NXR1 Y_RNA.203-201ENST00000364106 102 ntBASIC1.33□□□□□ -2.2
NDE1Q9NXR1 Y_RNA.350-201ENST00000365409 98 ntBASIC1.33□□□□□ -2.2
NDE1Q9NXR1 Y_RNA.447-201ENST00000384184 113 ntBASIC1.33□□□□□ -2.2
NDE1Q9NXR1 RNU6-950P-201ENST00000384651 107 ntBASIC1.33□□□□□ -2.2
NDE1Q9NXR1 Y_RNA.572-201ENST00000384757 98 ntBASIC1.33□□□□□ -2.2
NDE1Q9NXR1 MIR562-201ENST00000384894 95 ntBASIC1.33□□□□□ -2.2
NDE1Q9NXR1 SNORA67.6-201ENST00000391093 99 ntBASIC1.33□□□□□ -2.2
NDE1Q9NXR1 PIGPP3-201ENST00000425307 415 ntBASIC1.33□□□□□ -2.2
NDE1Q9NXR1 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.33□□□□□ -2.2
NDE1Q9NXR1 RNU6-437P-201ENST00000459408 95 ntBASIC1.33□□□□□ -2.2
NDE1Q9NXR1 SNORD116-28-201ENST00000516123 91 ntBASIC1.33□□□□□ -2.2
NDE1Q9NXR1 Y_RNA.679-201ENST00000516416 91 ntBASIC1.33□□□□□ -2.2
NDE1Q9NXR1 RNA5SP168-201ENST00000516642 112 ntBASIC1.33□□□□□ -2.2
NDE1Q9NXR1 MIR8074-201ENST00000615081 81 ntBASIC1.33□□□□□ -2.2
NDE1Q9NXR1 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.33□□□□□ -2.2
NDE1Q9NXR1 MIR26B-201ENST00000362251 77 ntBASIC1.32□□□□□ -2.2
NDE1Q9NXR1 Y_RNA.65-201ENST00000362846 100 ntBASIC1.32□□□□□ -2.2
NDE1Q9NXR1 RNA5SP190-201ENST00000365222 118 ntBASIC1.32□□□□□ -2.2
NDE1Q9NXR1 Y_RNA.416-201ENST00000384014 113 ntBASIC1.32□□□□□ -2.2
NDE1Q9NXR1 Y_RNA.539-201ENST00000384635 107 ntBASIC1.32□□□□□ -2.2
NDE1Q9NXR1 MIR30A-201ENST00000385092 71 ntBASIC1.32□□□□□ -2.2
NDE1Q9NXR1 AL161935.2-201ENST00000414627 60 ntBASIC1.32□□□□□ -2.2
NDE1Q9NXR1 PGBD4P5-201ENST00000445958 426 ntBASIC1.32□□□□□ -2.2
NDE1Q9NXR1 AC093850.1-201ENST00000454121 251 ntBASIC1.32□□□□□ -2.2
NDE1Q9NXR1 SUMO2P16-201ENST00000519475 264 ntBASIC1.32□□□□□ -2.2
NDE1Q9NXR1 AL358944.1-201ENST00000528537 144 ntBASIC1.32□□□□□ -2.2
NDE1Q9NXR1 SNORA77B-201ENST00000578179 125 ntBASIC1.32□□□□□ -2.2
NDE1Q9NXR1 SNORA28-201ENST00000606769 126 ntBASIC1.32□□□□□ -2.2
NDE1Q9NXR1 AC073349.3-201ENST00000617616 186 ntBASIC1.32□□□□□ -2.2
NDE1Q9NXR1 MIR8063-201ENST00000621930 81 ntBASIC1.32□□□□□ -2.2
NDE1Q9NXR1 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
NDE1Q9NXR1 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
NDE1Q9NXR1 MIRLET7C-201ENST00000362160 84 ntBASIC1.31□□□□□ -2.2
NDE1Q9NXR1 Y_RNA.122-201ENST00000363331 96 ntBASIC1.31□□□□□ -2.2
NDE1Q9NXR1 RNU6-1209P-201ENST00000363655 107 ntBASIC1.31□□□□□ -2.2
NDE1Q9NXR1 RNU6-424P-201ENST00000384367 105 ntBASIC1.31□□□□□ -2.2
NDE1Q9NXR1 MIR194-1-201ENST00000384892 85 ntBASIC1.31□□□□□ -2.2
NDE1Q9NXR1 RNA5SP482-201ENST00000391269 118 ntBASIC1.31□□□□□ -2.2
NDE1Q9NXR1 MIR548H3-201ENST00000408771 118 ntBASIC1.31□□□□□ -2.2
NDE1Q9NXR1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.31□□□□□ -2.2
NDE1Q9NXR1 SNRPGP10-201ENST00000432323 225 ntBASIC1.31□□□□□ -2.2
NDE1Q9NXR1 SNORD2.1-201ENST00000458762 69 ntBASIC1.31□□□□□ -2.2
NDE1Q9NXR1 HMGN1P7-201ENST00000491722 313 ntBASIC1.31□□□□□ -2.2
NDE1Q9NXR1 RN7SKP179-201ENST00000516126 217 ntBASIC1.31□□□□□ -2.2
NDE1Q9NXR1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.31□□□□□ -2.2
NDE1Q9NXR1 AC004817.2-201ENST00000561794 651 ntBASIC1.31□□□□□ -2.2
NDE1Q9NXR1 AC068338.1-201ENST00000565567 176 ntBASIC1.31□□□□□ -2.2
NDE1Q9NXR1 RPL23AP91-201ENST00000569211 455 ntBASIC1.31□□□□□ -2.2
NDE1Q9NXR1 AC106754.2-201ENST00000623006 233 ntBASIC1.31□□□□□ -2.2
NDE1Q9NXR1 Y_RNA.796-201ENST00000364268 102 ntBASIC1.3□□□□□ -2.2
NDE1Q9NXR1 Y_RNA.799-201ENST00000364992 102 ntBASIC1.3□□□□□ -2.2
NDE1Q9NXR1 SNORD26-201ENST00000384147 75 ntBASIC1.3□□□□□ -2.2
NDE1Q9NXR1 Y_RNA.508-201ENST00000384502 114 ntBASIC1.3□□□□□ -2.2
NDE1Q9NXR1 MIR150-201ENST00000385048 84 ntBASIC1.3□□□□□ -2.2
NDE1Q9NXR1 AC004965.1-201ENST00000413033 213 ntBASIC1.3□□□□□ -2.2
NDE1Q9NXR1 SNORD13-201ENST00000459299 104 ntBASIC1.3□□□□□ -2.2
NDE1Q9NXR1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.3□□□□□ -2.2
NDE1Q9NXR1 TRMT112P2-201ENST00000512910 132 ntBASIC1.3□□□□□ -2.2
NDE1Q9NXR1 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.3□□□□□ -2.2
NDE1Q9NXR1 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.3□□□□□ -2.2
NDE1Q9NXR1 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.3□□□□□ -2.2
NDE1Q9NXR1 SNORD3E-202ENST00000627253 216 ntBASIC1.3□□□□□ -2.2
NDE1Q9NXR1 MIR367-201ENST00000362299 68 ntBASIC1.29□□□□□ -2.2
NDE1Q9NXR1 Y_RNA.82-201ENST00000363000 102 ntBASIC1.29□□□□□ -2.2
NDE1Q9NXR1 Y_RNA.92-201ENST00000363043 102 ntBASIC1.29□□□□□ -2.2
NDE1Q9NXR1 RNY1P10-201ENST00000363268 113 ntBASIC1.29□□□□□ -2.2
NDE1Q9NXR1 RNU6-457P-201ENST00000363999 107 ntBASIC1.29□□□□□ -2.2
NDE1Q9NXR1 Y_RNA.235-201ENST00000364412 102 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms