Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 CYCSP26-201ENST00000534107 320 ntBASIC2.93□□□□□ -1.94
TMEM39AQ9NV64 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.93□□□□□ -1.94
TMEM39AQ9NV64 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TMEM39AQ9NV64 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.92□□□□□ -1.94
TMEM39AQ9NV64 AL355596.1-201ENST00000565399 3996 ntBASIC2.92□□□□□ -1.94
TMEM39AQ9NV64 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TMEM39AQ9NV64 MIR26A1-201ENST00000362205 77 ntBASIC2.92□□□□□ -1.94
TMEM39AQ9NV64 RNU6-1084P-201ENST00000362498 107 ntBASIC2.92□□□□□ -1.94
TMEM39AQ9NV64 SNORA22-201ENST00000383907 134 ntBASIC2.92□□□□□ -1.94
TMEM39AQ9NV64 MIR548A3-201ENST00000385297 97 ntBASIC2.92□□□□□ -1.94
TMEM39AQ9NV64 RNA5SP425-201ENST00000410336 112 ntBASIC2.92□□□□□ -1.94
TMEM39AQ9NV64 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.92□□□□□ -1.94
TMEM39AQ9NV64 RNA5SP236-201ENST00000516169 116 ntBASIC2.92□□□□□ -1.94
TMEM39AQ9NV64 AL121890.5-201ENST00000620848 304 ntBASIC2.92□□□□□ -1.94
TMEM39AQ9NV64 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TMEM39AQ9NV64 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TMEM39AQ9NV64 MIR518F-201ENST00000384973 87 ntBASIC2.91□□□□□ -1.94
TMEM39AQ9NV64 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.91□□□□□ -1.94
TMEM39AQ9NV64 snoU13.23-201ENST00000458863 104 ntBASIC2.91□□□□□ -1.94
TMEM39AQ9NV64 RN7SL297P-201ENST00000483161 293 ntBASIC2.91□□□□□ -1.94
TMEM39AQ9NV64 RNU6-1149P-201ENST00000516810 97 ntBASIC2.91□□□□□ -1.94
TMEM39AQ9NV64 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.91□□□□□ -1.94
TMEM39AQ9NV64 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TMEM39AQ9NV64 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.9□□□□□ -1.94
TMEM39AQ9NV64 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.9□□□□□ -1.94
TMEM39AQ9NV64 SNORD14E-201ENST00000364009 85 ntBASIC2.9□□□□□ -1.95
TMEM39AQ9NV64 SNORD114-30-201ENST00000364448 72 ntBASIC2.9□□□□□ -1.95
TMEM39AQ9NV64 Y_RNA.346-201ENST00000365385 112 ntBASIC2.9□□□□□ -1.95
TMEM39AQ9NV64 SNORA46-201ENST00000384762 135 ntBASIC2.9□□□□□ -1.95
TMEM39AQ9NV64 SNORA11.4-201ENST00000408823 129 ntBASIC2.9□□□□□ -1.95
TMEM39AQ9NV64 AC245047.3-201ENST00000429428 127 ntBASIC2.9□□□□□ -1.95
TMEM39AQ9NV64 IGKV3-31-201ENST00000523109 329 ntBASIC2.9□□□□□ -1.95
TMEM39AQ9NV64 MIR4648-201ENST00000580107 72 ntBASIC2.9□□□□□ -1.95
TMEM39AQ9NV64 MIR4762-201ENST00000585261 75 ntBASIC2.9□□□□□ -1.95
TMEM39AQ9NV64 AC025166.1-201ENST00000612411 163 ntBASIC2.9□□□□□ -1.95
TMEM39AQ9NV64 AC022202.1-201ENST00000613515 211 ntBASIC2.9□□□□□ -1.95
TMEM39AQ9NV64 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
TMEM39AQ9NV64 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
TMEM39AQ9NV64 U8.5-201ENST00000364528 136 ntBASIC2.89□□□□□ -1.95
TMEM39AQ9NV64 Y_RNA.265-201ENST00000364677 108 ntBASIC2.89□□□□□ -1.95
TMEM39AQ9NV64 U8.9-201ENST00000365667 134 ntBASIC2.89□□□□□ -1.95
TMEM39AQ9NV64 RNU6-442P-201ENST00000383968 104 ntBASIC2.89□□□□□ -1.95
TMEM39AQ9NV64 SNORD116-21-201ENST00000384507 92 ntBASIC2.89□□□□□ -1.95
TMEM39AQ9NV64 MIRLET7F2-201ENST00000385277 83 ntBASIC2.89□□□□□ -1.95
TMEM39AQ9NV64 MIR548O-201ENST00000408583 114 ntBASIC2.89□□□□□ -1.95
TMEM39AQ9NV64 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.89□□□□□ -1.95
TMEM39AQ9NV64 AL606517.2-201ENST00000442855 241 ntBASIC2.89□□□□□ -1.95
TMEM39AQ9NV64 CYCTP-201ENST00000504253 315 ntBASIC2.89□□□□□ -1.95
TMEM39AQ9NV64 RNA5SP282-201ENST00000516355 108 ntBASIC2.89□□□□□ -1.95
TMEM39AQ9NV64 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.89□□□□□ -1.95
TMEM39AQ9NV64 U4.3-201ENST00000621047 82 ntBASIC2.89□□□□□ -1.95
TMEM39AQ9NV64 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
TMEM39AQ9NV64 snoU2-30.1-201ENST00000365012 70 ntBASIC2.88□□□□□ -1.95
TMEM39AQ9NV64 RNA5SP109-201ENST00000391010 116 ntBASIC2.88□□□□□ -1.95
TMEM39AQ9NV64 AC003982.1-202ENST00000469928 248 ntBASIC2.88□□□□□ -1.95
TMEM39AQ9NV64 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.88□□□□□ -1.95
TMEM39AQ9NV64 RN7SKP43-201ENST00000516173 320 ntBASIC2.88□□□□□ -1.95
TMEM39AQ9NV64 RNA5SP320-201ENST00000516263 124 ntBASIC2.88□□□□□ -1.95
TMEM39AQ9NV64 IGKV1-22-201ENST00000524313 326 ntBASIC2.88□□□□□ -1.95
TMEM39AQ9NV64 AC015712.3-201ENST00000559380 164 ntBASIC2.88□□□□□ -1.95
TMEM39AQ9NV64 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.88□□□□□ -1.95
TMEM39AQ9NV64 AC006441.5-201ENST00000612680 209 ntBASIC2.88□□□□□ -1.95
TMEM39AQ9NV64 AC022513.1-201ENST00000624512 117 ntBASIC2.88□□□□□ -1.95
TMEM39AQ9NV64 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.88□□□□□ -1.95
TMEM39AQ9NV64 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.88□□□□□ -1.95
TMEM39AQ9NV64 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TMEM39AQ9NV64 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
TMEM39AQ9NV64 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
TMEM39AQ9NV64 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
TMEM39AQ9NV64 RNU1-58P-201ENST00000362413 163 ntBASIC2.87□□□□□ -1.95
TMEM39AQ9NV64 RNU1-91P-201ENST00000364746 163 ntBASIC2.87□□□□□ -1.95
TMEM39AQ9NV64 MIR27B-201ENST00000385129 97 ntBASIC2.87□□□□□ -1.95
TMEM39AQ9NV64 RNA5SP482-201ENST00000391269 118 ntBASIC2.87□□□□□ -1.95
TMEM39AQ9NV64 MIR1263-201ENST00000408324 86 ntBASIC2.87□□□□□ -1.95
TMEM39AQ9NV64 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.87□□□□□ -1.95
TMEM39AQ9NV64 UQCRHP3-201ENST00000451503 251 ntBASIC2.87□□□□□ -1.95
TMEM39AQ9NV64 RN7SL499P-201ENST00000481141 276 ntBASIC2.87□□□□□ -1.95
TMEM39AQ9NV64 SNORD45.4-201ENST00000516629 73 ntBASIC2.87□□□□□ -1.95
TMEM39AQ9NV64 SCARNA15-202ENST00000516881 127 ntBASIC2.87□□□□□ -1.95
TMEM39AQ9NV64 DEFB122-202ENST00000569013 197 ntBASIC2.87□□□□□ -1.95
TMEM39AQ9NV64 MIR5197-201ENST00000583721 112 ntBASIC2.87□□□□□ -1.95
TMEM39AQ9NV64 AC134878.1-201ENST00000619901 243 ntBASIC2.87□□□□□ -1.95
TMEM39AQ9NV64 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.87□□□□□ -1.95
TMEM39AQ9NV64 MIR376A2-201ENST00000636782 80 ntBASIC2.87□□□□□ -1.95
TMEM39AQ9NV64 MTND5P18-201ENST00000445624 1801 ntBASIC2.86□□□□□ -1.95
TMEM39AQ9NV64 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.86□□□□□ -1.95
TMEM39AQ9NV64 Y_RNA.35-201ENST00000362601 101 ntBASIC2.86□□□□□ -1.95
TMEM39AQ9NV64 RNU6-755P-201ENST00000364400 103 ntBASIC2.86□□□□□ -1.95
TMEM39AQ9NV64 MIR29C-201ENST00000385231 88 ntBASIC2.86□□□□□ -1.95
TMEM39AQ9NV64 RNA5SP492-201ENST00000411330 114 ntBASIC2.86□□□□□ -1.95
TMEM39AQ9NV64 AC007064.1-201ENST00000412238 351 ntBASIC2.86□□□□□ -1.95
TMEM39AQ9NV64 AC063976.4-201ENST00000421971 163 ntBASIC2.86□□□□□ -1.95
TMEM39AQ9NV64 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.86□□□□□ -1.95
TMEM39AQ9NV64 Y_RNA.649-201ENST00000459077 103 ntBASIC2.86□□□□□ -1.95
TMEM39AQ9NV64 RNU7-25P-201ENST00000516544 62 ntBASIC2.86□□□□□ -1.95
TMEM39AQ9NV64 MIR3126-201ENST00000577443 74 ntBASIC2.86□□□□□ -1.95
TMEM39AQ9NV64 AC005786.1-201ENST00000588553 154 ntBASIC2.86□□□□□ -1.95
TMEM39AQ9NV64 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.86□□□□□ -1.95
TMEM39AQ9NV64 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TMEM39AQ9NV64 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms