Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SNORD1A-201ENST00000364968 72 ntBASIC1.67□□□□□ -2.14
LIN7CQ9NUP9 Y_RNA.476-201ENST00000384347 108 ntBASIC1.67□□□□□ -2.14
LIN7CQ9NUP9 RN7SKP51-201ENST00000410781 304 ntBASIC1.67□□□□□ -2.14
LIN7CQ9NUP9 uc_338.20-201ENST00000621563 178 ntBASIC1.67□□□□□ -2.14
LIN7CQ9NUP9 SNORD14E-201ENST00000364009 85 ntBASIC1.66□□□□□ -2.14
LIN7CQ9NUP9 snoU2_19.4-201ENST00000364329 80 ntBASIC1.66□□□□□ -2.14
LIN7CQ9NUP9 MIR934-201ENST00000401241 83 ntBASIC1.66□□□□□ -2.14
LIN7CQ9NUP9 Y_RNA.626-201ENST00000411288 95 ntBASIC1.66□□□□□ -2.14
LIN7CQ9NUP9 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.66□□□□□ -2.14
LIN7CQ9NUP9 AC079140.2-201ENST00000506193 142 ntBASIC1.66□□□□□ -2.14
LIN7CQ9NUP9 AC019176.1-201ENST00000518519 225 ntBASIC1.66□□□□□ -2.14
LIN7CQ9NUP9 AC008507.4-201ENST00000585464 127 ntBASIC1.66□□□□□ -2.14
LIN7CQ9NUP9 AC087685.1-201ENST00000587507 141 ntBASIC1.66□□□□□ -2.14
LIN7CQ9NUP9 AL365434.2-201ENST00000607979 234 ntBASIC1.66□□□□□ -2.14
LIN7CQ9NUP9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.66□□□□□ -2.14
LIN7CQ9NUP9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
LIN7CQ9NUP9 RNY1-201ENST00000364228 113 ntBASIC1.65□□□□□ -2.15
LIN7CQ9NUP9 Y_RNA.308-201ENST00000365043 101 ntBASIC1.65□□□□□ -2.15
LIN7CQ9NUP9 MIR802-201ENST00000390235 94 ntBASIC1.65□□□□□ -2.15
LIN7CQ9NUP9 SNORD72-201ENST00000390994 80 ntBASIC1.65□□□□□ -2.15
LIN7CQ9NUP9 Y_RNA.587-201ENST00000391210 103 ntBASIC1.65□□□□□ -2.15
LIN7CQ9NUP9 AC245047.8-201ENST00000456455 284 ntBASIC1.65□□□□□ -2.15
LIN7CQ9NUP9 AC092991.1-201ENST00000477176 376 ntBASIC1.65□□□□□ -2.15
LIN7CQ9NUP9 RNU6-1007P-201ENST00000516586 107 ntBASIC1.65□□□□□ -2.15
LIN7CQ9NUP9 RNU6-388P-201ENST00000517012 105 ntBASIC1.65□□□□□ -2.15
LIN7CQ9NUP9 RNU6-389P-201ENST00000517048 105 ntBASIC1.65□□□□□ -2.15
LIN7CQ9NUP9 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.65□□□□□ -2.15
LIN7CQ9NUP9 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.65□□□□□ -2.15
LIN7CQ9NUP9 uc_338.4-201ENST00000616635 176 ntBASIC1.65□□□□□ -2.15
LIN7CQ9NUP9 AC078938.1-201ENST00000620993 318 ntBASIC1.65□□□□□ -2.15
LIN7CQ9NUP9 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
LIN7CQ9NUP9 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
LIN7CQ9NUP9 Y_RNA.199-201ENST00000364014 102 ntBASIC1.64□□□□□ -2.15
LIN7CQ9NUP9 RNU4-17P-201ENST00000365598 141 ntBASIC1.64□□□□□ -2.15
LIN7CQ9NUP9 SNORA64-201ENST00000384674 134 ntBASIC1.64□□□□□ -2.15
LIN7CQ9NUP9 MT-TT-201ENST00000387460 66 ntBASIC1.64□□□□□ -2.15
LIN7CQ9NUP9 MIR1298-201ENST00000408783 112 ntBASIC1.64□□□□□ -2.15
LIN7CQ9NUP9 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.64□□□□□ -2.15
LIN7CQ9NUP9 HMGN2P32-201ENST00000444648 269 ntBASIC1.64□□□□□ -2.15
LIN7CQ9NUP9 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.64□□□□□ -2.15
LIN7CQ9NUP9 RNU6-453P-201ENST00000516819 85 ntBASIC1.64□□□□□ -2.15
LIN7CQ9NUP9 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.64□□□□□ -2.15
LIN7CQ9NUP9 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
LIN7CQ9NUP9 ZNF355P-201ENST00000427301 3216 ntBASIC1.63□□□□□ -2.15
LIN7CQ9NUP9 RNU6-923P-201ENST00000364753 107 ntBASIC1.63□□□□□ -2.15
LIN7CQ9NUP9 Y_RNA.336-201ENST00000365307 109 ntBASIC1.63□□□□□ -2.15
LIN7CQ9NUP9 MIR526A1-201ENST00000384897 85 ntBASIC1.63□□□□□ -2.15
LIN7CQ9NUP9 RNU1-78P-201ENST00000391248 165 ntBASIC1.63□□□□□ -2.15
LIN7CQ9NUP9 RNU6-493P-201ENST00000391321 108 ntBASIC1.63□□□□□ -2.15
LIN7CQ9NUP9 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.63□□□□□ -2.15
LIN7CQ9NUP9 AL139156.1-201ENST00000412785 841 ntBASIC1.63□□□□□ -2.15
LIN7CQ9NUP9 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
LIN7CQ9NUP9 COX6CP14-201ENST00000469580 174 ntBASIC1.63□□□□□ -2.15
LIN7CQ9NUP9 RN7SL274P-201ENST00000492268 272 ntBASIC1.63□□□□□ -2.15
LIN7CQ9NUP9 SCARNA8-201ENST00000515924 131 ntBASIC1.63□□□□□ -2.15
LIN7CQ9NUP9 RNU6-917P-201ENST00000516294 104 ntBASIC1.63□□□□□ -2.15
LIN7CQ9NUP9 RNU7-149P-201ENST00000516739 59 ntBASIC1.63□□□□□ -2.15
LIN7CQ9NUP9 MIR4422-201ENST00000581938 83 ntBASIC1.63□□□□□ -2.15
LIN7CQ9NUP9 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.63□□□□□ -2.15
LIN7CQ9NUP9 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
LIN7CQ9NUP9 WWP1P1-201ENST00000466609 2769 ntBASIC1.62□□□□□ -2.15
LIN7CQ9NUP9 Y_RNA.200-201ENST00000364018 102 ntBASIC1.62□□□□□ -2.15
LIN7CQ9NUP9 RNU6-442P-201ENST00000383968 104 ntBASIC1.62□□□□□ -2.15
LIN7CQ9NUP9 MIR516B2-201ENST00000385190 85 ntBASIC1.62□□□□□ -2.15
LIN7CQ9NUP9 RNU6-381P-201ENST00000391259 108 ntBASIC1.62□□□□□ -2.15
LIN7CQ9NUP9 SUMO2P12-201ENST00000405924 140 ntBASIC1.62□□□□□ -2.15
LIN7CQ9NUP9 AL445646.1-201ENST00000431784 216 ntBASIC1.62□□□□□ -2.15
LIN7CQ9NUP9 AC027119.1-201ENST00000440877 241 ntBASIC1.62□□□□□ -2.15
LIN7CQ9NUP9 RN7SL429P-201ENST00000479090 223 ntBASIC1.62□□□□□ -2.15
LIN7CQ9NUP9 RN7SL489P-201ENST00000486185 223 ntBASIC1.62□□□□□ -2.15
LIN7CQ9NUP9 RN7SL327P-201ENST00000488659 223 ntBASIC1.62□□□□□ -2.15
LIN7CQ9NUP9 RNU1-41P-201ENST00000516161 162 ntBASIC1.62□□□□□ -2.15
LIN7CQ9NUP9 RNU1-48P-201ENST00000516400 162 ntBASIC1.62□□□□□ -2.15
LIN7CQ9NUP9 IGKV3-31-201ENST00000523109 329 ntBASIC1.62□□□□□ -2.15
LIN7CQ9NUP9 MIR3937-201ENST00000580135 106 ntBASIC1.62□□□□□ -2.15
LIN7CQ9NUP9 MIR3945-201ENST00000581853 98 ntBASIC1.62□□□□□ -2.15
LIN7CQ9NUP9 AC009779.6-201ENST00000603972 165 ntBASIC1.62□□□□□ -2.15
LIN7CQ9NUP9 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.62□□□□□ -2.15
LIN7CQ9NUP9 RN7SL853P-201ENST00000617250 223 ntBASIC1.62□□□□□ -2.15
LIN7CQ9NUP9 AC141273.2-201ENST00000618989 130 ntBASIC1.62□□□□□ -2.15
LIN7CQ9NUP9 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
LIN7CQ9NUP9 SNORA2.2-201ENST00000365473 135 ntBASIC1.61□□□□□ -2.15
LIN7CQ9NUP9 MIR452-201ENST00000385020 85 ntBASIC1.61□□□□□ -2.15
LIN7CQ9NUP9 MIR616-201ENST00000385293 97 ntBASIC1.61□□□□□ -2.15
LIN7CQ9NUP9 AL023284.1-201ENST00000403956 276 ntBASIC1.61□□□□□ -2.15
LIN7CQ9NUP9 SNORA11.2-201ENST00000408318 127 ntBASIC1.61□□□□□ -2.15
LIN7CQ9NUP9 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.61□□□□□ -2.15
LIN7CQ9NUP9 SNX2P2-201ENST00000424553 323 ntBASIC1.61□□□□□ -2.15
LIN7CQ9NUP9 AC015922.2-201ENST00000435593 184 ntBASIC1.61□□□□□ -2.15
LIN7CQ9NUP9 RN7SKP164-201ENST00000516138 266 ntBASIC1.61□□□□□ -2.15
LIN7CQ9NUP9 AC130289.1-201ENST00000577321 73 ntBASIC1.61□□□□□ -2.15
LIN7CQ9NUP9 FAM106DP-201ENST00000586416 501 ntBASIC1.61□□□□□ -2.15
LIN7CQ9NUP9 Pinc.1-201ENST00000616452 154 ntBASIC1.61□□□□□ -2.15
LIN7CQ9NUP9 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.61□□□□□ -2.15
LIN7CQ9NUP9 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
LIN7CQ9NUP9 SNORD33-201ENST00000362761 85 ntBASIC1.6□□□□□ -2.15
LIN7CQ9NUP9 Y_RNA.83-201ENST00000363005 113 ntBASIC1.6□□□□□ -2.15
LIN7CQ9NUP9 Y_RNA.515-201ENST00000384535 112 ntBASIC1.6□□□□□ -2.15
LIN7CQ9NUP9 Y_RNA.552-201ENST00000384665 112 ntBASIC1.6□□□□□ -2.15
LIN7CQ9NUP9 MIR653-201ENST00000385279 96 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms