Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 RNU6-165P-201ENST00000517170 99 ntBASIC1.49□□□□□ -2.17
SMC4Q9NTJ3 AP003733.2-201ENST00000529409 171 ntBASIC1.49□□□□□ -2.17
SMC4Q9NTJ3 POLR3GP1-201ENST00000594073 261 ntBASIC1.49□□□□□ -2.17
SMC4Q9NTJ3 RNU4-90P-201ENST00000362773 141 ntBASIC1.48□□□□□ -2.17
SMC4Q9NTJ3 RNU6-833P-201ENST00000363486 107 ntBASIC1.48□□□□□ -2.17
SMC4Q9NTJ3 Y_RNA.253-201ENST00000364562 112 ntBASIC1.48□□□□□ -2.17
SMC4Q9NTJ3 SNORA63C-201ENST00000364578 129 ntBASIC1.48□□□□□ -2.17
SMC4Q9NTJ3 RNU6-1323P-201ENST00000384025 107 ntBASIC1.48□□□□□ -2.17
SMC4Q9NTJ3 MIR1278-201ENST00000408753 81 ntBASIC1.48□□□□□ -2.17
SMC4Q9NTJ3 DYNLT3P2-201ENST00000442517 295 ntBASIC1.48□□□□□ -2.17
SMC4Q9NTJ3 RNU6-322P-201ENST00000516010 103 ntBASIC1.48□□□□□ -2.17
SMC4Q9NTJ3 RNU7-115P-201ENST00000516433 55 ntBASIC1.48□□□□□ -2.17
SMC4Q9NTJ3 U8.5-201ENST00000364528 136 ntBASIC1.47□□□□□ -2.17
SMC4Q9NTJ3 Y_RNA.276-201ENST00000364732 109 ntBASIC1.47□□□□□ -2.17
SMC4Q9NTJ3 SNORA72-201ENST00000384339 132 ntBASIC1.47□□□□□ -2.17
SMC4Q9NTJ3 RNU6-939P-201ENST00000384634 107 ntBASIC1.47□□□□□ -2.17
SMC4Q9NTJ3 RNU6-1105P-201ENST00000384774 107 ntBASIC1.47□□□□□ -2.17
SMC4Q9NTJ3 MIR489-201ENST00000384923 84 ntBASIC1.47□□□□□ -2.17
SMC4Q9NTJ3 AL451046.2-201ENST00000403074 277 ntBASIC1.47□□□□□ -2.17
SMC4Q9NTJ3 MLLT10P1-201ENST00000418346 262 ntBASIC1.47□□□□□ -2.17
SMC4Q9NTJ3 RNU7-141P-201ENST00000459304 62 ntBASIC1.47□□□□□ -2.17
SMC4Q9NTJ3 CYCTP-201ENST00000504253 315 ntBASIC1.47□□□□□ -2.17
SMC4Q9NTJ3 RNU6-917P-201ENST00000516294 104 ntBASIC1.47□□□□□ -2.17
SMC4Q9NTJ3 AC136628.3-201ENST00000521868 290 ntBASIC1.47□□□□□ -2.17
SMC4Q9NTJ3 MIR4762-201ENST00000585261 75 ntBASIC1.47□□□□□ -2.17
SMC4Q9NTJ3 AP003357.1-201ENST00000604497 148 ntBASIC1.47□□□□□ -2.17
SMC4Q9NTJ3 Y_RNA.84-201ENST00000363011 104 ntBASIC1.46□□□□□ -2.18
SMC4Q9NTJ3 Y_RNA.136-201ENST00000363444 102 ntBASIC1.46□□□□□ -2.18
SMC4Q9NTJ3 Y_RNA.191-201ENST00000363972 113 ntBASIC1.46□□□□□ -2.18
SMC4Q9NTJ3 MIR522-201ENST00000385071 87 ntBASIC1.46□□□□□ -2.18
SMC4Q9NTJ3 AC114811.1-201ENST00000507207 168 ntBASIC1.46□□□□□ -2.18
SMC4Q9NTJ3 RNU6-922P-201ENST00000516753 99 ntBASIC1.46□□□□□ -2.18
SMC4Q9NTJ3 AC120024.3-201ENST00000603167 156 ntBASIC1.46□□□□□ -2.18
SMC4Q9NTJ3 AL357312.1-201ENST00000603879 298 ntBASIC1.46□□□□□ -2.18
SMC4Q9NTJ3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.46□□□□□ -2.18
SMC4Q9NTJ3 RNU6-290P-201ENST00000365212 101 ntBASIC1.45□□□□□ -2.18
SMC4Q9NTJ3 SNORA72.4-201ENST00000384174 132 ntBASIC1.45□□□□□ -2.18
SMC4Q9NTJ3 MIR606-201ENST00000384851 96 ntBASIC1.45□□□□□ -2.18
SMC4Q9NTJ3 MIR526A1-201ENST00000384897 85 ntBASIC1.45□□□□□ -2.18
SMC4Q9NTJ3 SNORD41-201ENST00000386967 70 ntBASIC1.45□□□□□ -2.18
SMC4Q9NTJ3 RNU6-763P-201ENST00000390865 106 ntBASIC1.45□□□□□ -2.18
SMC4Q9NTJ3 RNU6-1109P-201ENST00000391187 107 ntBASIC1.45□□□□□ -2.18
SMC4Q9NTJ3 MIR891A-201ENST00000401237 79 ntBASIC1.45□□□□□ -2.18
SMC4Q9NTJ3 AL591704.2-201ENST00000421658 181 ntBASIC1.45□□□□□ -2.18
SMC4Q9NTJ3 Y_RNA.637-201ENST00000459424 114 ntBASIC1.45□□□□□ -2.18
SMC4Q9NTJ3 RNU6-570P-201ENST00000517051 105 ntBASIC1.45□□□□□ -2.18
SMC4Q9NTJ3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.45□□□□□ -2.18
SMC4Q9NTJ3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.45□□□□□ -2.18
SMC4Q9NTJ3 MIR548AY-201ENST00000617669 107 ntBASIC1.45□□□□□ -2.18
SMC4Q9NTJ3 AC091895.1-201ENST00000624494 256 ntBASIC1.45□□□□□ -2.18
SMC4Q9NTJ3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.45□□□□□ -2.18
SMC4Q9NTJ3 RNA5SP327-201ENST00000362494 101 ntBASIC1.44□□□□□ -2.18
SMC4Q9NTJ3 RNU6-1160P-201ENST00000384546 104 ntBASIC1.44□□□□□ -2.18
SMC4Q9NTJ3 MTCO2P33-201ENST00000402100 465 ntBASIC1.44□□□□□ -2.18
SMC4Q9NTJ3 AC024067.1-201ENST00000426199 223 ntBASIC1.44□□□□□ -2.18
SMC4Q9NTJ3 SNRPGP10-201ENST00000432323 225 ntBASIC1.44□□□□□ -2.18
SMC4Q9NTJ3 AL731563.1-201ENST00000442202 214 ntBASIC1.44□□□□□ -2.18
SMC4Q9NTJ3 RPL23AP54-201ENST00000495129 419 ntBASIC1.44□□□□□ -2.18
SMC4Q9NTJ3 RN7SKP179-201ENST00000516126 217 ntBASIC1.44□□□□□ -2.18
SMC4Q9NTJ3 SNORA4-201ENST00000584302 138 ntBASIC1.44□□□□□ -2.18
SMC4Q9NTJ3 Y_RNA.812-201ENST00000610788 101 ntBASIC1.44□□□□□ -2.18
SMC4Q9NTJ3 Y_RNA.784-201ENST00000613803 101 ntBASIC1.44□□□□□ -2.18
SMC4Q9NTJ3 Y_RNA.787-201ENST00000616522 101 ntBASIC1.44□□□□□ -2.18
SMC4Q9NTJ3 Y_RNA.780-201ENST00000617336 101 ntBASIC1.44□□□□□ -2.18
SMC4Q9NTJ3 Y_RNA.801-201ENST00000619005 101 ntBASIC1.44□□□□□ -2.18
SMC4Q9NTJ3 RNU6-238P-201ENST00000363313 106 ntBASIC1.43□□□□□ -2.18
SMC4Q9NTJ3 SNORD50B-201ENST00000364995 70 ntBASIC1.43□□□□□ -2.18
SMC4Q9NTJ3 RNU6-53P-201ENST00000365367 106 ntBASIC1.43□□□□□ -2.18
SMC4Q9NTJ3 RNU6-662P-201ENST00000384253 104 ntBASIC1.43□□□□□ -2.18
SMC4Q9NTJ3 RNU6-163P-201ENST00000384396 106 ntBASIC1.43□□□□□ -2.18
SMC4Q9NTJ3 RNU6-1011P-201ENST00000384668 107 ntBASIC1.43□□□□□ -2.18
SMC4Q9NTJ3 MIR618-201ENST00000385287 98 ntBASIC1.43□□□□□ -2.18
SMC4Q9NTJ3 MIR1285-1-201ENST00000408593 84 ntBASIC1.43□□□□□ -2.18
SMC4Q9NTJ3 RNU6-1054P-201ENST00000411293 104 ntBASIC1.43□□□□□ -2.18
SMC4Q9NTJ3 RNA5SP102-201ENST00000516865 106 ntBASIC1.43□□□□□ -2.18
SMC4Q9NTJ3 Y_RNA.720-201ENST00000517166 92 ntBASIC1.43□□□□□ -2.18
SMC4Q9NTJ3 AC019288.1-201ENST00000557918 224 ntBASIC1.43□□□□□ -2.18
SMC4Q9NTJ3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.43□□□□□ -2.18
SMC4Q9NTJ3 AC127455.1-201ENST00000565496 145 ntBASIC1.43□□□□□ -2.18
SMC4Q9NTJ3 MIR4452-201ENST00000583004 71 ntBASIC1.43□□□□□ -2.18
SMC4Q9NTJ3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
SMC4Q9NTJ3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.42□□□□□ -2.18
SMC4Q9NTJ3 Y_RNA.152-201ENST00000363578 100 ntBASIC1.42□□□□□ -2.18
SMC4Q9NTJ3 Y_RNA.203-201ENST00000364106 102 ntBASIC1.42□□□□□ -2.18
SMC4Q9NTJ3 SNORA25.8-201ENST00000364831 128 ntBASIC1.42□□□□□ -2.18
SMC4Q9NTJ3 SNORA36B-201ENST00000410438 131 ntBASIC1.42□□□□□ -2.18
SMC4Q9NTJ3 RNU6-1203P-201ENST00000410703 110 ntBASIC1.42□□□□□ -2.18
SMC4Q9NTJ3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.42□□□□□ -2.18
SMC4Q9NTJ3 AC091959.1-201ENST00000495857 238 ntBASIC1.42□□□□□ -2.18
SMC4Q9NTJ3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.42□□□□□ -2.18
SMC4Q9NTJ3 RNU6-635P-201ENST00000516651 102 ntBASIC1.42□□□□□ -2.18
SMC4Q9NTJ3 RNU2-31P-201ENST00000516954 155 ntBASIC1.42□□□□□ -2.18
SMC4Q9NTJ3 SCARNA24.2-201ENST00000516968 130 ntBASIC1.42□□□□□ -2.18
SMC4Q9NTJ3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
SMC4Q9NTJ3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SMC4Q9NTJ3 SNORA63-201ENST00000363450 132 ntBASIC1.41□□□□□ -2.18
SMC4Q9NTJ3 RNU6-1209P-201ENST00000363655 107 ntBASIC1.41□□□□□ -2.18
SMC4Q9NTJ3 Y_RNA.376-201ENST00000365638 108 ntBASIC1.41□□□□□ -2.18
SMC4Q9NTJ3 Y_RNA.422-201ENST00000384054 114 ntBASIC1.41□□□□□ -2.18
SMC4Q9NTJ3 RNU6-1338P-201ENST00000516328 91 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 224.9 ms