Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AL157834.3-201ENST00000615543 103 ntBASIC1.67□□□□□ -2.14
DDX4Q9NQI0 Y_RNA.789-201ENST00000622480 102 ntBASIC1.67□□□□□ -2.14
DDX4Q9NQI0 MIR424-201ENST00000362227 98 ntBASIC1.66□□□□□ -2.14
DDX4Q9NQI0 RNU6-1205P-201ENST00000363625 106 ntBASIC1.66□□□□□ -2.14
DDX4Q9NQI0 Y_RNA.401-201ENST00000383965 117 ntBASIC1.66□□□□□ -2.14
DDX4Q9NQI0 MTCO2P33-201ENST00000402100 465 ntBASIC1.66□□□□□ -2.14
DDX4Q9NQI0 SNORA36B-201ENST00000410438 131 ntBASIC1.66□□□□□ -2.14
DDX4Q9NQI0 RNU2-14P-201ENST00000411053 191 ntBASIC1.66□□□□□ -2.14
DDX4Q9NQI0 JTBP1-201ENST00000441314 247 ntBASIC1.66□□□□□ -2.14
DDX4Q9NQI0 STAG3L5P-204ENST00000443759 179 ntBASIC1.66□□□□□ -2.14
DDX4Q9NQI0 RNU6-437P-201ENST00000459408 95 ntBASIC1.66□□□□□ -2.14
DDX4Q9NQI0 Y_RNA.637-201ENST00000459424 114 ntBASIC1.66□□□□□ -2.14
DDX4Q9NQI0 MIR2681-201ENST00000581814 105 ntBASIC1.66□□□□□ -2.14
DDX4Q9NQI0 AC005357.1-201ENST00000588399 301 ntBASIC1.66□□□□□ -2.14
DDX4Q9NQI0 AP001485.1-201ENST00000604799 199 ntBASIC1.66□□□□□ -2.14
DDX4Q9NQI0 BX284668.6-201ENST00000606899 438 ntBASIC1.66□□□□□ -2.14
DDX4Q9NQI0 MIR8074-201ENST00000615081 81 ntBASIC1.66□□□□□ -2.14
DDX4Q9NQI0 AL353770.2-201ENST00000620024 78 ntBASIC1.66□□□□□ -2.14
DDX4Q9NQI0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
DDX4Q9NQI0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
DDX4Q9NQI0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.65□□□□□ -2.15
DDX4Q9NQI0 RNU6-1123P-201ENST00000362347 106 ntBASIC1.65□□□□□ -2.15
DDX4Q9NQI0 U8.1-201ENST00000362843 134 ntBASIC1.65□□□□□ -2.15
DDX4Q9NQI0 RNU6-1080P-201ENST00000383982 107 ntBASIC1.65□□□□□ -2.15
DDX4Q9NQI0 Y_RNA.416-201ENST00000384014 113 ntBASIC1.65□□□□□ -2.15
DDX4Q9NQI0 MIR499A-201ENST00000384903 122 ntBASIC1.65□□□□□ -2.15
DDX4Q9NQI0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
DDX4Q9NQI0 AL603910.2-201ENST00000407268 136 ntBASIC1.65□□□□□ -2.15
DDX4Q9NQI0 MIR1267-201ENST00000408723 78 ntBASIC1.65□□□□□ -2.15
DDX4Q9NQI0 Y_RNA.590-201ENST00000410140 107 ntBASIC1.65□□□□□ -2.15
DDX4Q9NQI0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.65□□□□□ -2.15
DDX4Q9NQI0 SNORD2.1-201ENST00000458762 69 ntBASIC1.65□□□□□ -2.15
DDX4Q9NQI0 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.65□□□□□ -2.15
DDX4Q9NQI0 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.65□□□□□ -2.15
DDX4Q9NQI0 Y_RNA.714-201ENST00000517065 90 ntBASIC1.65□□□□□ -2.15
DDX4Q9NQI0 MIR5692C2-201ENST00000577959 77 ntBASIC1.65□□□□□ -2.15
DDX4Q9NQI0 MIR5688-201ENST00000580619 83 ntBASIC1.65□□□□□ -2.15
DDX4Q9NQI0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.65□□□□□ -2.15
DDX4Q9NQI0 AL513423.1-201ENST00000621695 132 ntBASIC1.65□□□□□ -2.15
DDX4Q9NQI0 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.65□□□□□ -2.15
DDX4Q9NQI0 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.65□□□□□ -2.15
DDX4Q9NQI0 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
DDX4Q9NQI0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.64□□□□□ -2.15
DDX4Q9NQI0 RNU6-674P-201ENST00000363831 107 ntBASIC1.64□□□□□ -2.15
DDX4Q9NQI0 RNU6-1048P-201ENST00000364054 107 ntBASIC1.64□□□□□ -2.15
DDX4Q9NQI0 RNU6-740P-201ENST00000364734 105 ntBASIC1.64□□□□□ -2.15
DDX4Q9NQI0 RNU6-574P-201ENST00000384265 107 ntBASIC1.64□□□□□ -2.15
DDX4Q9NQI0 PGBD4P5-201ENST00000445958 426 ntBASIC1.64□□□□□ -2.15
DDX4Q9NQI0 RPS29P29-201ENST00000456396 171 ntBASIC1.64□□□□□ -2.15
DDX4Q9NQI0 AC004223.1-201ENST00000479840 271 ntBASIC1.64□□□□□ -2.15
DDX4Q9NQI0 HMGN1P7-201ENST00000491722 313 ntBASIC1.64□□□□□ -2.15
DDX4Q9NQI0 AL008718.3-201ENST00000610217 321 ntBASIC1.64□□□□□ -2.15
DDX4Q9NQI0 AC021506.2-201ENST00000612354 169 ntBASIC1.64□□□□□ -2.15
DDX4Q9NQI0 AC073349.3-201ENST00000617616 186 ntBASIC1.64□□□□□ -2.15
DDX4Q9NQI0 snoU18.1-201ENST00000629629 71 ntBASIC1.64□□□□□ -2.15
DDX4Q9NQI0 Y_RNA.20-201ENST00000362479 113 ntBASIC1.63□□□□□ -2.15
DDX4Q9NQI0 Y_RNA.54-201ENST00000362766 105 ntBASIC1.63□□□□□ -2.15
DDX4Q9NQI0 Y_RNA.203-201ENST00000364106 102 ntBASIC1.63□□□□□ -2.15
DDX4Q9NQI0 U8.5-201ENST00000364528 136 ntBASIC1.63□□□□□ -2.15
DDX4Q9NQI0 Y_RNA.253-201ENST00000364562 112 ntBASIC1.63□□□□□ -2.15
DDX4Q9NQI0 SNORA25.9-201ENST00000365087 128 ntBASIC1.63□□□□□ -2.15
DDX4Q9NQI0 RNU6-211P-201ENST00000384047 107 ntBASIC1.63□□□□□ -2.15
DDX4Q9NQI0 MIR1276-201ENST00000408707 83 ntBASIC1.63□□□□□ -2.15
DDX4Q9NQI0 SNRPGP13-201ENST00000442212 177 ntBASIC1.63□□□□□ -2.15
DDX4Q9NQI0 AC023790.1-201ENST00000482174 347 ntBASIC1.63□□□□□ -2.15
DDX4Q9NQI0 AC099513.1-201ENST00000490423 301 ntBASIC1.63□□□□□ -2.15
DDX4Q9NQI0 OR9P1P-201ENST00000496431 281 ntBASIC1.63□□□□□ -2.15
DDX4Q9NQI0 RNU6-1023P-201ENST00000516137 106 ntBASIC1.63□□□□□ -2.15
DDX4Q9NQI0 Y_RNA.679-201ENST00000516416 91 ntBASIC1.63□□□□□ -2.15
DDX4Q9NQI0 MIR4282-201ENST00000583613 67 ntBASIC1.63□□□□□ -2.15
DDX4Q9NQI0 JPX_2.1-201ENST00000614161 69 ntBASIC1.63□□□□□ -2.15
DDX4Q9NQI0 AC134026.1-201ENST00000623249 2239 ntBASIC1.63□□□□□ -2.15
DDX4Q9NQI0 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.62□□□□□ -2.15
DDX4Q9NQI0 RNU4-41P-201ENST00000364426 143 ntBASIC1.62□□□□□ -2.15
DDX4Q9NQI0 RNU6-439P-201ENST00000384188 106 ntBASIC1.62□□□□□ -2.15
DDX4Q9NQI0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.62□□□□□ -2.15
DDX4Q9NQI0 RNU6-1007P-201ENST00000516586 107 ntBASIC1.62□□□□□ -2.15
DDX4Q9NQI0 MIR4762-201ENST00000585261 75 ntBASIC1.62□□□□□ -2.15
DDX4Q9NQI0 AC087685.1-201ENST00000587507 141 ntBASIC1.62□□□□□ -2.15
DDX4Q9NQI0 AL591926.4-201ENST00000616895 298 ntBASIC1.62□□□□□ -2.15
DDX4Q9NQI0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
DDX4Q9NQI0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
DDX4Q9NQI0 MIR367-201ENST00000362299 68 ntBASIC1.61□□□□□ -2.15
DDX4Q9NQI0 Y_RNA.117-201ENST00000363294 101 ntBASIC1.61□□□□□ -2.15
DDX4Q9NQI0 RNU6-424P-201ENST00000384367 105 ntBASIC1.61□□□□□ -2.15
DDX4Q9NQI0 Y_RNA.489-201ENST00000384410 101 ntBASIC1.61□□□□□ -2.15
DDX4Q9NQI0 MIR194-1-201ENST00000384892 85 ntBASIC1.61□□□□□ -2.15
DDX4Q9NQI0 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.61□□□□□ -2.15
DDX4Q9NQI0 MIR526A2-201ENST00000390198 65 ntBASIC1.61□□□□□ -2.15
DDX4Q9NQI0 snoU13.9-201ENST00000458927 103 ntBASIC1.61□□□□□ -2.15
DDX4Q9NQI0 RNU1-123P-201ENST00000458950 160 ntBASIC1.61□□□□□ -2.15
DDX4Q9NQI0 RNA5SP61-201ENST00000516453 100 ntBASIC1.61□□□□□ -2.15
DDX4Q9NQI0 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.61□□□□□ -2.15
DDX4Q9NQI0 MIR4724-201ENST00000579485 89 ntBASIC1.61□□□□□ -2.15
DDX4Q9NQI0 AP000942.4-201ENST00000604811 241 ntBASIC1.61□□□□□ -2.15
DDX4Q9NQI0 Y_RNA.122-201ENST00000363331 96 ntBASIC1.6□□□□□ -2.15
DDX4Q9NQI0 Y_RNA.242-201ENST00000364473 110 ntBASIC1.6□□□□□ -2.15
DDX4Q9NQI0 Y_RNA.277-201ENST00000364754 102 ntBASIC1.6□□□□□ -2.15
DDX4Q9NQI0 SNORA20.1-201ENST00000364790 130 ntBASIC1.6□□□□□ -2.15
DDX4Q9NQI0 Y_RNA.293-201ENST00000364908 93 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms