Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 RNU6-1149P-201ENST00000516810 97 ntBASIC2.54□□□□□ -2
PCDH18Q9HCL0 NDUFA5P6-201ENST00000542110 379 ntBASIC2.54□□□□□ -2
PCDH18Q9HCL0 AL365205.2-201ENST00000594586 68 ntBASIC2.54□□□□□ -2
PCDH18Q9HCL0 AC025166.1-201ENST00000612411 163 ntBASIC2.54□□□□□ -2
PCDH18Q9HCL0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.54□□□□□ -2
PCDH18Q9HCL0 MIR6817-201ENST00000615588 66 ntBASIC2.54□□□□□ -2
PCDH18Q9HCL0 U4.3-201ENST00000621047 82 ntBASIC2.54□□□□□ -2
PCDH18Q9HCL0 AC008555.8-201ENST00000623602 2168 ntBASIC2.54□□□□□ -2
PCDH18Q9HCL0 MIR548A2-201ENST00000384956 97 ntBASIC2.53□□□□□ -2
PCDH18Q9HCL0 MIR802-201ENST00000390235 94 ntBASIC2.53□□□□□ -2
PCDH18Q9HCL0 Y_RNA.617-201ENST00000410920 90 ntBASIC2.53□□□□□ -2
PCDH18Q9HCL0 AC007064.1-201ENST00000412238 351 ntBASIC2.53□□□□□ -2
PCDH18Q9HCL0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.53□□□□□ -2
PCDH18Q9HCL0 AF228730.3-201ENST00000436691 102 ntBASIC2.53□□□□□ -2
PCDH18Q9HCL0 AL606517.2-201ENST00000442855 241 ntBASIC2.53□□□□□ -2
PCDH18Q9HCL0 Y_RNA.649-201ENST00000459077 103 ntBASIC2.53□□□□□ -2
PCDH18Q9HCL0 RNA5SP148-201ENST00000516527 94 ntBASIC2.53□□□□□ -2
PCDH18Q9HCL0 RNU6-341P-201ENST00000516973 96 ntBASIC2.53□□□□□ -2
PCDH18Q9HCL0 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.53□□□□□ -2
PCDH18Q9HCL0 MIR3613-201ENST00000579844 87 ntBASIC2.53□□□□□ -2
PCDH18Q9HCL0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.53□□□□□ -2
PCDH18Q9HCL0 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
PCDH18Q9HCL0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.53□□□□□ -2
PCDH18Q9HCL0 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
PCDH18Q9HCL0 MTND5P18-201ENST00000445624 1801 ntBASIC2.52□□□□□ -2.01
PCDH18Q9HCL0 RNU6-147P-201ENST00000383983 107 ntBASIC2.52□□□□□ -2.01
PCDH18Q9HCL0 MIR522-201ENST00000385071 87 ntBASIC2.52□□□□□ -2.01
PCDH18Q9HCL0 SNORD77.3-201ENST00000391113 65 ntBASIC2.52□□□□□ -2.01
PCDH18Q9HCL0 AL359511.1-201ENST00000402970 211 ntBASIC2.52□□□□□ -2.01
PCDH18Q9HCL0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.52□□□□□ -2.01
PCDH18Q9HCL0 AC018634.1-201ENST00000437554 401 ntBASIC2.52□□□□□ -2.01
PCDH18Q9HCL0 AC009238.1-201ENST00000442165 424 ntBASIC2.52□□□□□ -2.01
PCDH18Q9HCL0 AC009237.6-201ENST00000446969 424 ntBASIC2.52□□□□□ -2.01
PCDH18Q9HCL0 AL021397.1-201ENST00000451806 248 ntBASIC2.52□□□□□ -2.01
PCDH18Q9HCL0 AL365361.1-201ENST00000566942 3481 ntBASIC2.52□□□□□ -2.01
PCDH18Q9HCL0 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.51□□□□□ -2.01
PCDH18Q9HCL0 RNU6-1298P-201ENST00000362456 101 ntBASIC2.51□□□□□ -2.01
PCDH18Q9HCL0 RNU6-1084P-201ENST00000362498 107 ntBASIC2.51□□□□□ -2.01
PCDH18Q9HCL0 AC063976.4-201ENST00000421971 163 ntBASIC2.51□□□□□ -2.01
PCDH18Q9HCL0 AC099677.2-201ENST00000436385 175 ntBASIC2.51□□□□□ -2.01
PCDH18Q9HCL0 AC104389.3-201ENST00000445629 235 ntBASIC2.51□□□□□ -2.01
PCDH18Q9HCL0 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.51□□□□□ -2.01
PCDH18Q9HCL0 AL449363.1-201ENST00000617815 186 ntBASIC2.51□□□□□ -2.01
PCDH18Q9HCL0 MIR203B-201ENST00000636080 86 ntBASIC2.51□□□□□ -2.01
PCDH18Q9HCL0 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.51□□□□□ -2.01
PCDH18Q9HCL0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
PCDH18Q9HCL0 MIR21-201ENST00000362134 72 ntBASIC2.5□□□□□ -2.01
PCDH18Q9HCL0 MIR450A1-201ENST00000362262 91 ntBASIC2.5□□□□□ -2.01
PCDH18Q9HCL0 RNA5SP493-201ENST00000364115 91 ntBASIC2.5□□□□□ -2.01
PCDH18Q9HCL0 MIR518F-201ENST00000384973 87 ntBASIC2.5□□□□□ -2.01
PCDH18Q9HCL0 RNA5SP109-201ENST00000391010 116 ntBASIC2.5□□□□□ -2.01
PCDH18Q9HCL0 SRIP3-201ENST00000413200 219 ntBASIC2.5□□□□□ -2.01
PCDH18Q9HCL0 SNRPGP13-201ENST00000442212 177 ntBASIC2.5□□□□□ -2.01
PCDH18Q9HCL0 AL049873.1-201ENST00000480540 376 ntBASIC2.5□□□□□ -2.01
PCDH18Q9HCL0 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.5□□□□□ -2.01
PCDH18Q9HCL0 AC067747.1-201ENST00000608026 250 ntBASIC2.5□□□□□ -2.01
PCDH18Q9HCL0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.5□□□□□ -2.01
PCDH18Q9HCL0 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.5□□□□□ -2.01
PCDH18Q9HCL0 AC016717.2-201ENST00000609089 5141 ntBASIC2.5□□□□□ -2.01
PCDH18Q9HCL0 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PCDH18Q9HCL0 RNU6-888P-201ENST00000363010 101 ntBASIC2.49□□□□□ -2.01
PCDH18Q9HCL0 Y_RNA.99-201ENST00000363138 105 ntBASIC2.49□□□□□ -2.01
PCDH18Q9HCL0 Y_RNA.366-201ENST00000365540 102 ntBASIC2.49□□□□□ -2.01
PCDH18Q9HCL0 RNU6-160P-201ENST00000384591 107 ntBASIC2.49□□□□□ -2.01
PCDH18Q9HCL0 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.49□□□□□ -2.01
PCDH18Q9HCL0 AL353689.1-201ENST00000438895 199 ntBASIC2.49□□□□□ -2.01
PCDH18Q9HCL0 AC079804.2-201ENST00000490376 200 ntBASIC2.49□□□□□ -2.01
PCDH18Q9HCL0 RNA5SP236-201ENST00000516169 116 ntBASIC2.49□□□□□ -2.01
PCDH18Q9HCL0 RNU7-25P-201ENST00000516544 62 ntBASIC2.49□□□□□ -2.01
PCDH18Q9HCL0 RNU6-1116P-201ENST00000517269 99 ntBASIC2.49□□□□□ -2.01
PCDH18Q9HCL0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
PCDH18Q9HCL0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
PCDH18Q9HCL0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PCDH18Q9HCL0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.48□□□□□ -2.01
PCDH18Q9HCL0 AC005336.3-201ENST00000623833 2679 ntBASIC2.48□□□□□ -2.01
PCDH18Q9HCL0 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
PCDH18Q9HCL0 RNU6-23P-201ENST00000363283 107 ntBASIC2.48□□□□□ -2.01
PCDH18Q9HCL0 Y_RNA.528-201ENST00000384575 108 ntBASIC2.48□□□□□ -2.01
PCDH18Q9HCL0 MIR524-201ENST00000385242 87 ntBASIC2.48□□□□□ -2.01
PCDH18Q9HCL0 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
PCDH18Q9HCL0 AC026436.1-201ENST00000510537 270 ntBASIC2.48□□□□□ -2.01
PCDH18Q9HCL0 CYCSP26-201ENST00000534107 320 ntBASIC2.48□□□□□ -2.01
PCDH18Q9HCL0 uc_338.28-201ENST00000612082 187 ntBASIC2.48□□□□□ -2.01
PCDH18Q9HCL0 MIR1291-201ENST00000627649 87 ntBASIC2.48□□□□□ -2.01
PCDH18Q9HCL0 RNU1-91P-201ENST00000364746 163 ntBASIC2.47□□□□□ -2.01
PCDH18Q9HCL0 RNU1-51P-201ENST00000365345 176 ntBASIC2.47□□□□□ -2.01
PCDH18Q9HCL0 MIR548O-201ENST00000408583 114 ntBASIC2.47□□□□□ -2.01
PCDH18Q9HCL0 RNA5SP89-201ENST00000410300 108 ntBASIC2.47□□□□□ -2.01
PCDH18Q9HCL0 CALM2P4-201ENST00000430810 426 ntBASIC2.47□□□□□ -2.01
PCDH18Q9HCL0 FTH1P12-201ENST00000432137 551 ntBASIC2.47□□□□□ -2.01
PCDH18Q9HCL0 MTATP6P21-201ENST00000440681 189 ntBASIC2.47□□□□□ -2.01
PCDH18Q9HCL0 RNU6-240P-201ENST00000516098 97 ntBASIC2.47□□□□□ -2.01
PCDH18Q9HCL0 RNU6-126P-201ENST00000516685 103 ntBASIC2.47□□□□□ -2.01
PCDH18Q9HCL0 AP002004.2-201ENST00000531656 154 ntBASIC2.47□□□□□ -2.01
PCDH18Q9HCL0 MIR4679-2-201ENST00000578358 77 ntBASIC2.47□□□□□ -2.01
PCDH18Q9HCL0 AC103810.6-201ENST00000606708 136 ntBASIC2.47□□□□□ -2.01
PCDH18Q9HCL0 MIR6840-201ENST00000611937 71 ntBASIC2.47□□□□□ -2.01
PCDH18Q9HCL0 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PCDH18Q9HCL0 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PCDH18Q9HCL0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms