Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 SNORA67.5-201ENST00000391036 107 ntBASIC1.61□□□□□ -2.15
UPF2Q9HAU5 RNU6-383P-201ENST00000410864 94 ntBASIC1.61□□□□□ -2.15
UPF2Q9HAU5 Y_RNA.626-201ENST00000411288 95 ntBASIC1.61□□□□□ -2.15
UPF2Q9HAU5 AC245047.3-201ENST00000429428 127 ntBASIC1.61□□□□□ -2.15
UPF2Q9HAU5 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.61□□□□□ -2.15
UPF2Q9HAU5 AC099513.1-201ENST00000490423 301 ntBASIC1.61□□□□□ -2.15
UPF2Q9HAU5 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.61□□□□□ -2.15
UPF2Q9HAU5 AC090425.1-201ENST00000610007 140 ntBASIC1.61□□□□□ -2.15
UPF2Q9HAU5 AC073349.3-201ENST00000617616 186 ntBASIC1.61□□□□□ -2.15
UPF2Q9HAU5 AC141273.2-201ENST00000618989 130 ntBASIC1.61□□□□□ -2.15
UPF2Q9HAU5 MIR8054-201ENST00000620877 86 ntBASIC1.61□□□□□ -2.15
UPF2Q9HAU5 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
UPF2Q9HAU5 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.61□□□□□ -2.15
UPF2Q9HAU5 snoU2_19.4-201ENST00000364329 80 ntBASIC1.6□□□□□ -2.15
UPF2Q9HAU5 Y_RNA.257-201ENST00000364596 102 ntBASIC1.6□□□□□ -2.15
UPF2Q9HAU5 Y_RNA.267-201ENST00000364679 109 ntBASIC1.6□□□□□ -2.15
UPF2Q9HAU5 RNU6-1318P-201ENST00000365389 103 ntBASIC1.6□□□□□ -2.15
UPF2Q9HAU5 RNU6-439P-201ENST00000384188 106 ntBASIC1.6□□□□□ -2.15
UPF2Q9HAU5 MIR520G-201ENST00000385064 90 ntBASIC1.6□□□□□ -2.15
UPF2Q9HAU5 Z98949.2-201ENST00000440996 144 ntBASIC1.6□□□□□ -2.15
UPF2Q9HAU5 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.6□□□□□ -2.15
UPF2Q9HAU5 RNU4-71P-201ENST00000516258 113 ntBASIC1.6□□□□□ -2.15
UPF2Q9HAU5 AC068338.1-201ENST00000565567 176 ntBASIC1.6□□□□□ -2.15
UPF2Q9HAU5 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
UPF2Q9HAU5 RNU6-661P-201ENST00000362409 107 ntBASIC1.59□□□□□ -2.15
UPF2Q9HAU5 Y_RNA.796-201ENST00000364268 102 ntBASIC1.59□□□□□ -2.15
UPF2Q9HAU5 RNU4-41P-201ENST00000364426 143 ntBASIC1.59□□□□□ -2.15
UPF2Q9HAU5 Y_RNA.799-201ENST00000364992 102 ntBASIC1.59□□□□□ -2.15
UPF2Q9HAU5 MIR520A-201ENST00000384862 85 ntBASIC1.59□□□□□ -2.15
UPF2Q9HAU5 RNU6-440P-201ENST00000390882 105 ntBASIC1.59□□□□□ -2.15
UPF2Q9HAU5 RPL23AP54-201ENST00000495129 419 ntBASIC1.59□□□□□ -2.15
UPF2Q9HAU5 OR9P1P-201ENST00000496431 281 ntBASIC1.59□□□□□ -2.15
UPF2Q9HAU5 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.59□□□□□ -2.15
UPF2Q9HAU5 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.59□□□□□ -2.15
UPF2Q9HAU5 RN7SKP179-201ENST00000516126 217 ntBASIC1.59□□□□□ -2.15
UPF2Q9HAU5 RNU7-116P-201ENST00000516940 62 ntBASIC1.59□□□□□ -2.15
UPF2Q9HAU5 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.59□□□□□ -2.15
UPF2Q9HAU5 MIR4308-201ENST00000580634 81 ntBASIC1.59□□□□□ -2.15
UPF2Q9HAU5 AL021707.8-201ENST00000609428 183 ntBASIC1.59□□□□□ -2.15
UPF2Q9HAU5 MIRLET7C-201ENST00000362160 84 ntBASIC1.58□□□□□ -2.16
UPF2Q9HAU5 MIR424-201ENST00000362227 98 ntBASIC1.58□□□□□ -2.16
UPF2Q9HAU5 RNU6-674P-201ENST00000363831 107 ntBASIC1.58□□□□□ -2.16
UPF2Q9HAU5 Y_RNA.253-201ENST00000364562 112 ntBASIC1.58□□□□□ -2.16
UPF2Q9HAU5 RNU6-969P-201ENST00000383900 105 ntBASIC1.58□□□□□ -2.16
UPF2Q9HAU5 MIR626-201ENST00000385032 94 ntBASIC1.58□□□□□ -2.16
UPF2Q9HAU5 MIR1298-201ENST00000408783 112 ntBASIC1.58□□□□□ -2.16
UPF2Q9HAU5 RNU6-437P-201ENST00000459408 95 ntBASIC1.58□□□□□ -2.16
UPF2Q9HAU5 AL049830.1-201ENST00000468034 425 ntBASIC1.58□□□□□ -2.16
UPF2Q9HAU5 SCARNA8-201ENST00000515924 131 ntBASIC1.58□□□□□ -2.16
UPF2Q9HAU5 RNU6-138P-201ENST00000515952 107 ntBASIC1.58□□□□□ -2.16
UPF2Q9HAU5 Y_RNA.679-201ENST00000516416 91 ntBASIC1.58□□□□□ -2.16
UPF2Q9HAU5 AL591926.4-201ENST00000616895 298 ntBASIC1.58□□□□□ -2.16
UPF2Q9HAU5 AC095038.3-201ENST00000634439 195 ntBASIC1.58□□□□□ -2.16
UPF2Q9HAU5 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.58□□□□□ -2.16
UPF2Q9HAU5 AL161722.3-201ENST00000605789 2983 ntBASIC1.57□□□□□ -2.16
UPF2Q9HAU5 RNU6-1205P-201ENST00000363625 106 ntBASIC1.57□□□□□ -2.16
UPF2Q9HAU5 Y_RNA.203-201ENST00000364106 102 ntBASIC1.57□□□□□ -2.16
UPF2Q9HAU5 RNU6-47P-201ENST00000383866 107 ntBASIC1.57□□□□□ -2.16
UPF2Q9HAU5 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
UPF2Q9HAU5 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
UPF2Q9HAU5 SNORA17.3-201ENST00000391159 129 ntBASIC1.57□□□□□ -2.16
UPF2Q9HAU5 AC233266.1-201ENST00000454518 96 ntBASIC1.57□□□□□ -2.16
UPF2Q9HAU5 RNU1-123P-201ENST00000458950 160 ntBASIC1.57□□□□□ -2.16
UPF2Q9HAU5 SNORD11-201ENST00000459124 84 ntBASIC1.57□□□□□ -2.16
UPF2Q9HAU5 NDUFA4P2-201ENST00000489989 244 ntBASIC1.57□□□□□ -2.16
UPF2Q9HAU5 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.57□□□□□ -2.16
UPF2Q9HAU5 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.57□□□□□ -2.16
UPF2Q9HAU5 AL358944.1-201ENST00000528537 144 ntBASIC1.57□□□□□ -2.16
UPF2Q9HAU5 AC242852.1-201ENST00000612151 96 ntBASIC1.57□□□□□ -2.16
UPF2Q9HAU5 MIR8074-201ENST00000615081 81 ntBASIC1.57□□□□□ -2.16
UPF2Q9HAU5 AC244015.1-201ENST00000622301 99 ntBASIC1.57□□□□□ -2.16
UPF2Q9HAU5 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
UPF2Q9HAU5 MIR411-201ENST00000362239 96 ntBASIC1.56□□□□□ -2.16
UPF2Q9HAU5 RNU6-1209P-201ENST00000363655 107 ntBASIC1.56□□□□□ -2.16
UPF2Q9HAU5 Y_RNA.200-201ENST00000364018 102 ntBASIC1.56□□□□□ -2.16
UPF2Q9HAU5 MIR526A2-201ENST00000390198 65 ntBASIC1.56□□□□□ -2.16
UPF2Q9HAU5 RNU6-907P-201ENST00000390924 102 ntBASIC1.56□□□□□ -2.16
UPF2Q9HAU5 RNU6-381P-201ENST00000391259 108 ntBASIC1.56□□□□□ -2.16
UPF2Q9HAU5 AC108059.2-201ENST00000434626 151 ntBASIC1.56□□□□□ -2.16
UPF2Q9HAU5 RNU7-94P-201ENST00000459576 63 ntBASIC1.56□□□□□ -2.16
UPF2Q9HAU5 COX6CP14-201ENST00000469580 174 ntBASIC1.56□□□□□ -2.16
UPF2Q9HAU5 RNU6-453P-201ENST00000516819 85 ntBASIC1.56□□□□□ -2.16
UPF2Q9HAU5 RNU6-794P-201ENST00000517261 64 ntBASIC1.56□□□□□ -2.16
UPF2Q9HAU5 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
UPF2Q9HAU5 AP002004.2-201ENST00000531656 154 ntBASIC1.56□□□□□ -2.16
UPF2Q9HAU5 AL645939.4-201ENST00000604495 135 ntBASIC1.56□□□□□ -2.16
UPF2Q9HAU5 AC021506.2-201ENST00000612354 169 ntBASIC1.56□□□□□ -2.16
UPF2Q9HAU5 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
UPF2Q9HAU5 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
UPF2Q9HAU5 Y_RNA.24-201ENST00000362508 103 ntBASIC1.55□□□□□ -2.16
UPF2Q9HAU5 RNU6-414P-201ENST00000363705 104 ntBASIC1.55□□□□□ -2.16
UPF2Q9HAU5 RNU6-457P-201ENST00000363999 107 ntBASIC1.55□□□□□ -2.16
UPF2Q9HAU5 RNU6-200P-201ENST00000364743 107 ntBASIC1.55□□□□□ -2.16
UPF2Q9HAU5 Y_RNA.293-201ENST00000364908 93 ntBASIC1.55□□□□□ -2.16
UPF2Q9HAU5 Y_RNA.308-201ENST00000365043 101 ntBASIC1.55□□□□□ -2.16
UPF2Q9HAU5 Y_RNA.552-201ENST00000384665 112 ntBASIC1.55□□□□□ -2.16
UPF2Q9HAU5 RNU6-1031P-201ENST00000384773 107 ntBASIC1.55□□□□□ -2.16
UPF2Q9HAU5 MIR194-1-201ENST00000384892 85 ntBASIC1.55□□□□□ -2.16
UPF2Q9HAU5 RNU6-918P-201ENST00000391219 106 ntBASIC1.55□□□□□ -2.16
UPF2Q9HAU5 AL161935.2-201ENST00000414627 60 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 281.8 ms