Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 RNA5SP489-201ENST00000410986 109 ntBASIC1.91□□□□□ -2.1
CDT1Q9H211 AL162725.1-201ENST00000435405 301 ntBASIC1.91□□□□□ -2.1
CDT1Q9H211 SEPT7P4-201ENST00000437076 306 ntBASIC1.91□□□□□ -2.1
CDT1Q9H211 RPS4XP11-201ENST00000446897 772 ntBASIC1.91□□□□□ -2.1
CDT1Q9H211 AL163195.1-201ENST00000496941 348 ntBASIC1.91□□□□□ -2.1
CDT1Q9H211 RNU6-1278P-201ENST00000516130 107 ntBASIC1.91□□□□□ -2.1
CDT1Q9H211 RNU1-142P-201ENST00000516682 145 ntBASIC1.91□□□□□ -2.1
CDT1Q9H211 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.91□□□□□ -2.1
CDT1Q9H211 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.91□□□□□ -2.1
CDT1Q9H211 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.91□□□□□ -2.1
CDT1Q9H211 MIR4419B-201ENST00000577260 68 ntBASIC1.91□□□□□ -2.1
CDT1Q9H211 AC108706.1-201ENST00000611053 297 ntBASIC1.91□□□□□ -2.1
CDT1Q9H211 Y_RNA.802-201ENST00000614892 130 ntBASIC1.91□□□□□ -2.1
CDT1Q9H211 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CDT1Q9H211 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
CDT1Q9H211 RNU1-17P-201ENST00000363022 152 ntBASIC1.9□□□□□ -2.11
CDT1Q9H211 RNU6-746P-201ENST00000384112 109 ntBASIC1.9□□□□□ -2.11
CDT1Q9H211 Y_RNA.466-201ENST00000384294 113 ntBASIC1.9□□□□□ -2.11
CDT1Q9H211 RNU6-578P-201ENST00000390980 103 ntBASIC1.9□□□□□ -2.11
CDT1Q9H211 SUMO2P12-201ENST00000405924 140 ntBASIC1.9□□□□□ -2.11
CDT1Q9H211 AL158823.1-201ENST00000418441 478 ntBASIC1.9□□□□□ -2.11
CDT1Q9H211 HMGN2P38-201ENST00000423806 265 ntBASIC1.9□□□□□ -2.11
CDT1Q9H211 HMGN2P19-201ENST00000425149 265 ntBASIC1.9□□□□□ -2.11
CDT1Q9H211 RNU7-99P-201ENST00000516271 62 ntBASIC1.9□□□□□ -2.11
CDT1Q9H211 AC084364.2-201ENST00000546924 395 ntBASIC1.9□□□□□ -2.11
CDT1Q9H211 AC127455.1-201ENST00000565496 145 ntBASIC1.9□□□□□ -2.11
CDT1Q9H211 MIR4299-201ENST00000577899 72 ntBASIC1.9□□□□□ -2.11
CDT1Q9H211 MIR4744-201ENST00000581563 82 ntBASIC1.9□□□□□ -2.11
CDT1Q9H211 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.9□□□□□ -2.11
CDT1Q9H211 AC073413.2-201ENST00000604332 360 ntBASIC1.9□□□□□ -2.11
CDT1Q9H211 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
CDT1Q9H211 Y_RNA.75-201ENST00000362927 97 ntBASIC1.89□□□□□ -2.11
CDT1Q9H211 MIR515-2-201ENST00000384883 83 ntBASIC1.89□□□□□ -2.11
CDT1Q9H211 MIR515-1-201ENST00000384884 83 ntBASIC1.89□□□□□ -2.11
CDT1Q9H211 MIR526A2-201ENST00000390198 65 ntBASIC1.89□□□□□ -2.11
CDT1Q9H211 RNU4-61P-201ENST00000411243 107 ntBASIC1.89□□□□□ -2.11
CDT1Q9H211 AC245047.4-201ENST00000433189 144 ntBASIC1.89□□□□□ -2.11
CDT1Q9H211 RPL36AP21-201ENST00000490372 323 ntBASIC1.89□□□□□ -2.11
CDT1Q9H211 RPL23AP54-201ENST00000495129 419 ntBASIC1.89□□□□□ -2.11
CDT1Q9H211 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.89□□□□□ -2.11
CDT1Q9H211 Y_RNA.797-201ENST00000515977 94 ntBASIC1.89□□□□□ -2.11
CDT1Q9H211 RNU7-200P-201ENST00000516105 62 ntBASIC1.89□□□□□ -2.11
CDT1Q9H211 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.89□□□□□ -2.11
CDT1Q9H211 SUB1P4-201ENST00000566062 339 ntBASIC1.89□□□□□ -2.11
CDT1Q9H211 MIR3683-201ENST00000580847 82 ntBASIC1.89□□□□□ -2.11
CDT1Q9H211 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.89□□□□□ -2.11
CDT1Q9H211 AC069114.2-201ENST00000604699 304 ntBASIC1.89□□□□□ -2.11
CDT1Q9H211 AL773524.1-201ENST00000614065 229 ntBASIC1.89□□□□□ -2.11
CDT1Q9H211 U1.36-201ENST00000620684 176 ntBASIC1.89□□□□□ -2.11
CDT1Q9H211 Y_RNA.121-201ENST00000363309 113 ntBASIC1.88□□□□□ -2.11
CDT1Q9H211 Y_RNA.796-201ENST00000364268 102 ntBASIC1.88□□□□□ -2.11
CDT1Q9H211 RNU6-1019P-201ENST00000364424 107 ntBASIC1.88□□□□□ -2.11
CDT1Q9H211 Y_RNA.799-201ENST00000364992 102 ntBASIC1.88□□□□□ -2.11
CDT1Q9H211 RNA5SP57-201ENST00000459463 123 ntBASIC1.88□□□□□ -2.11
CDT1Q9H211 SNORA25.15-201ENST00000516487 89 ntBASIC1.88□□□□□ -2.11
CDT1Q9H211 RNU6-1007P-201ENST00000516586 107 ntBASIC1.88□□□□□ -2.11
CDT1Q9H211 AC024995.1-201ENST00000523014 93 ntBASIC1.88□□□□□ -2.11
CDT1Q9H211 MIR4255-201ENST00000579351 72 ntBASIC1.88□□□□□ -2.11
CDT1Q9H211 MIR4724-201ENST00000579485 89 ntBASIC1.88□□□□□ -2.11
CDT1Q9H211 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.88□□□□□ -2.11
CDT1Q9H211 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CDT1Q9H211 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CDT1Q9H211 AL157777.2-201ENST00000258070 137 ntBASIC1.87□□□□□ -2.11
CDT1Q9H211 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.87□□□□□ -2.11
CDT1Q9H211 Y_RNA.272-201ENST00000364696 102 ntBASIC1.87□□□□□ -2.11
CDT1Q9H211 RNU6-275P-201ENST00000364910 107 ntBASIC1.87□□□□□ -2.11
CDT1Q9H211 RNU6-144P-201ENST00000383951 107 ntBASIC1.87□□□□□ -2.11
CDT1Q9H211 RNU6-376P-201ENST00000384731 106 ntBASIC1.87□□□□□ -2.11
CDT1Q9H211 MIR616-201ENST00000385293 97 ntBASIC1.87□□□□□ -2.11
CDT1Q9H211 AL606845.1-201ENST00000404881 255 ntBASIC1.87□□□□□ -2.11
CDT1Q9H211 RNU2-40P-201ENST00000410833 196 ntBASIC1.87□□□□□ -2.11
CDT1Q9H211 AC245517.4-201ENST00000448601 281 ntBASIC1.87□□□□□ -2.11
CDT1Q9H211 SNRPGP8-201ENST00000454064 226 ntBASIC1.87□□□□□ -2.11
CDT1Q9H211 RNA5SP272-201ENST00000516095 111 ntBASIC1.87□□□□□ -2.11
CDT1Q9H211 AC109810.1-201ENST00000534066 224 ntBASIC1.87□□□□□ -2.11
CDT1Q9H211 AC091178.2-201ENST00000584401 117 ntBASIC1.87□□□□□ -2.11
CDT1Q9H211 snoU13.31-201ENST00000607291 104 ntBASIC1.87□□□□□ -2.11
CDT1Q9H211 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CDT1Q9H211 RNY1P11-201ENST00000363759 113 ntBASIC1.86□□□□□ -2.11
CDT1Q9H211 RNU4-84P-201ENST00000364200 139 ntBASIC1.86□□□□□ -2.11
CDT1Q9H211 RNU6-312P-201ENST00000364629 107 ntBASIC1.86□□□□□ -2.11
CDT1Q9H211 RNA5SP190-201ENST00000365222 118 ntBASIC1.86□□□□□ -2.11
CDT1Q9H211 RNU6-1080P-201ENST00000383982 107 ntBASIC1.86□□□□□ -2.11
CDT1Q9H211 RNU4-52P-201ENST00000384209 138 ntBASIC1.86□□□□□ -2.11
CDT1Q9H211 RNA5SP212-201ENST00000391223 107 ntBASIC1.86□□□□□ -2.11
CDT1Q9H211 RNA5SP100-201ENST00000410903 110 ntBASIC1.86□□□□□ -2.11
CDT1Q9H211 RNA5SP59-201ENST00000410922 110 ntBASIC1.86□□□□□ -2.11
CDT1Q9H211 AC010154.1-201ENST00000425857 269 ntBASIC1.86□□□□□ -2.11
CDT1Q9H211 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.86□□□□□ -2.11
CDT1Q9H211 AL606517.2-201ENST00000442855 241 ntBASIC1.86□□□□□ -2.11
CDT1Q9H211 SNORD13-201ENST00000459299 104 ntBASIC1.86□□□□□ -2.11
CDT1Q9H211 RNU6-437P-201ENST00000459408 95 ntBASIC1.86□□□□□ -2.11
CDT1Q9H211 RPS26P45-201ENST00000471748 340 ntBASIC1.86□□□□□ -2.11
CDT1Q9H211 RN7SKP164-201ENST00000516138 266 ntBASIC1.86□□□□□ -2.11
CDT1Q9H211 RNA5SP364-201ENST00000516938 78 ntBASIC1.86□□□□□ -2.11
CDT1Q9H211 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.86□□□□□ -2.11
CDT1Q9H211 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.86□□□□□ -2.11
CDT1Q9H211 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.86□□□□□ -2.11
CDT1Q9H211 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.86□□□□□ -2.11
CDT1Q9H211 MIR3658-201ENST00000636291 56 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms