Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.64□□□□□ -1.99
RNF38Q9H0F5 RNA5SP89-201ENST00000410300 108 ntBASIC2.64□□□□□ -1.99
RNF38Q9H0F5 AC007064.1-201ENST00000412238 351 ntBASIC2.64□□□□□ -1.99
RNF38Q9H0F5 MTATP6P21-201ENST00000440681 189 ntBASIC2.64□□□□□ -1.99
RNF38Q9H0F5 AL021397.1-201ENST00000451806 248 ntBASIC2.64□□□□□ -1.99
RNF38Q9H0F5 MIR4446-201ENST00000578505 67 ntBASIC2.64□□□□□ -1.99
RNF38Q9H0F5 MIR6079-201ENST00000635807 62 ntBASIC2.64□□□□□ -1.99
RNF38Q9H0F5 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.64□□□□□ -1.99
RNF38Q9H0F5 MTND5P18-201ENST00000445624 1801 ntBASIC2.63□□□□□ -1.99
RNF38Q9H0F5 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RNF38Q9H0F5 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.63□□□□□ -1.99
RNF38Q9H0F5 MIR450A1-201ENST00000362262 91 ntBASIC2.63□□□□□ -1.99
RNF38Q9H0F5 MIR126-201ENST00000362291 85 ntBASIC2.63□□□□□ -1.99
RNF38Q9H0F5 RNU6-880P-201ENST00000384526 107 ntBASIC2.63□□□□□ -1.99
RNF38Q9H0F5 RNA5SP210-201ENST00000391034 120 ntBASIC2.63□□□□□ -1.99
RNF38Q9H0F5 AC018634.1-201ENST00000437554 401 ntBASIC2.63□□□□□ -1.99
RNF38Q9H0F5 RNU6-693P-201ENST00000516134 107 ntBASIC2.63□□□□□ -1.99
RNF38Q9H0F5 RNU6-168P-201ENST00000516189 101 ntBASIC2.63□□□□□ -1.99
RNF38Q9H0F5 AC091544.4-201ENST00000555268 342 ntBASIC2.63□□□□□ -1.99
RNF38Q9H0F5 MIR3945-201ENST00000581853 98 ntBASIC2.63□□□□□ -1.99
RNF38Q9H0F5 AC008507.4-201ENST00000585464 127 ntBASIC2.63□□□□□ -1.99
RNF38Q9H0F5 AL359075.3-201ENST00000613288 217 ntBASIC2.63□□□□□ -1.99
RNF38Q9H0F5 U4.3-201ENST00000621047 82 ntBASIC2.63□□□□□ -1.99
RNF38Q9H0F5 AP006437.1-201ENST00000641440 3685 ntBASIC2.63□□□□□ -1.99
RNF38Q9H0F5 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.63□□□□□ -1.99
RNF38Q9H0F5 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.62□□□□□ -1.99
RNF38Q9H0F5 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
RNF38Q9H0F5 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
RNF38Q9H0F5 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
RNF38Q9H0F5 RNA5SP289-201ENST00000362332 137 ntBASIC2.62□□□□□ -1.99
RNF38Q9H0F5 Y_RNA.346-201ENST00000365385 112 ntBASIC2.62□□□□□ -1.99
RNF38Q9H0F5 RNU6-160P-201ENST00000384591 107 ntBASIC2.62□□□□□ -1.99
RNF38Q9H0F5 MIRLET7F2-201ENST00000385277 83 ntBASIC2.62□□□□□ -1.99
RNF38Q9H0F5 RNA5SP323-201ENST00000391094 133 ntBASIC2.62□□□□□ -1.99
RNF38Q9H0F5 RNA5SP508-201ENST00000411327 119 ntBASIC2.62□□□□□ -1.99
RNF38Q9H0F5 RNU6-1149P-201ENST00000516810 97 ntBASIC2.62□□□□□ -1.99
RNF38Q9H0F5 MIR4435-1-201ENST00000582552 80 ntBASIC2.62□□□□□ -1.99
RNF38Q9H0F5 MIR5194-201ENST00000582634 120 ntBASIC2.62□□□□□ -1.99
RNF38Q9H0F5 uc_338.28-201ENST00000612082 187 ntBASIC2.62□□□□□ -1.99
RNF38Q9H0F5 AL591926.4-201ENST00000616895 298 ntBASIC2.62□□□□□ -1.99
RNF38Q9H0F5 CTSLP2-204ENST00000629029 392 ntBASIC2.62□□□□□ -1.99
RNF38Q9H0F5 MIR338-201ENST00000636369 67 ntBASIC2.62□□□□□ -1.99
RNF38Q9H0F5 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RNF38Q9H0F5 MIR29C-201ENST00000385231 88 ntBASIC2.61□□□□□ -1.99
RNF38Q9H0F5 RNA5SP270-201ENST00000411361 118 ntBASIC2.61□□□□□ -1.99
RNF38Q9H0F5 AC008413.1-201ENST00000511864 177 ntBASIC2.61□□□□□ -1.99
RNF38Q9H0F5 RNA5SP236-201ENST00000516169 116 ntBASIC2.61□□□□□ -1.99
RNF38Q9H0F5 AL049779.4-201ENST00000604500 156 ntBASIC2.61□□□□□ -1.99
RNF38Q9H0F5 MIR4679-1-201ENST00000637619 75 ntBASIC2.61□□□□□ -1.99
RNF38Q9H0F5 U6.108-201ENST00000637764 58 ntBASIC2.61□□□□□ -1.99
RNF38Q9H0F5 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RNF38Q9H0F5 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
RNF38Q9H0F5 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RNF38Q9H0F5 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RNF38Q9H0F5 AC018630.2-201ENST00000534866 2403 ntBASIC2.6□□□□□ -1.99
RNF38Q9H0F5 RNU6-888P-201ENST00000363010 101 ntBASIC2.6□□□□□ -1.99
RNF38Q9H0F5 SNORA3A-201ENST00000364113 130 ntBASIC2.6□□□□□ -1.99
RNF38Q9H0F5 SNORD114-6-201ENST00000364393 72 ntBASIC2.6□□□□□ -1.99
RNF38Q9H0F5 SNORA8-201ENST00000384574 139 ntBASIC2.6□□□□□ -1.99
RNF38Q9H0F5 AL117342.1-201ENST00000404861 406 ntBASIC2.6□□□□□ -1.99
RNF38Q9H0F5 RNU1-142P-201ENST00000516682 145 ntBASIC2.6□□□□□ -1.99
RNF38Q9H0F5 RNU6-341P-201ENST00000516973 96 ntBASIC2.6□□□□□ -1.99
RNF38Q9H0F5 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.6□□□□□ -1.99
RNF38Q9H0F5 AL590808.1-201ENST00000618696 141 ntBASIC2.6□□□□□ -1.99
RNF38Q9H0F5 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RNF38Q9H0F5 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RNF38Q9H0F5 ZNF271P-202ENST00000465539 1970 ntBASIC2.6□□□□□ -1.99
RNF38Q9H0F5 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.59□□□□□ -1.99
RNF38Q9H0F5 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.59□□□□□ -1.99
RNF38Q9H0F5 SNORA1B-201ENST00000362535 133 ntBASIC2.59□□□□□ -1.99
RNF38Q9H0F5 SNORD24-201ENST00000383884 75 ntBASIC2.59□□□□□ -1.99
RNF38Q9H0F5 RNU1-138P-201ENST00000384093 164 ntBASIC2.59□□□□□ -1.99
RNF38Q9H0F5 Y_RNA.528-201ENST00000384575 108 ntBASIC2.59□□□□□ -1.99
RNF38Q9H0F5 MIR548A2-201ENST00000384956 97 ntBASIC2.59□□□□□ -1.99
RNF38Q9H0F5 MIR802-201ENST00000390235 94 ntBASIC2.59□□□□□ -1.99
RNF38Q9H0F5 SNORD77.3-201ENST00000391113 65 ntBASIC2.59□□□□□ -1.99
RNF38Q9H0F5 SUMO1P4-201ENST00000429430 302 ntBASIC2.59□□□□□ -1.99
RNF38Q9H0F5 SNRPGP13-201ENST00000442212 177 ntBASIC2.59□□□□□ -1.99
RNF38Q9H0F5 TRBV12-1-201ENST00000479785 344 ntBASIC2.59□□□□□ -1.99
RNF38Q9H0F5 SNORD53-201ENST00000579969 78 ntBASIC2.59□□□□□ -1.99
RNF38Q9H0F5 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.59□□□□□ -1.99
RNF38Q9H0F5 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
RNF38Q9H0F5 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.58□□□□□ -2
RNF38Q9H0F5 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RNF38Q9H0F5 SNORD68-201ENST00000363214 84 ntBASIC2.58□□□□□ -2
RNF38Q9H0F5 Y_RNA.116-201ENST00000363292 103 ntBASIC2.58□□□□□ -2
RNF38Q9H0F5 DEFA7P-201ENST00000382676 285 ntBASIC2.58□□□□□ -2
RNF38Q9H0F5 RNU6-1292P-201ENST00000383856 107 ntBASIC2.58□□□□□ -2
RNF38Q9H0F5 AL359511.1-201ENST00000402970 211 ntBASIC2.58□□□□□ -2
RNF38Q9H0F5 CALM2P4-201ENST00000430810 426 ntBASIC2.58□□□□□ -2
RNF38Q9H0F5 RNU1-131P-201ENST00000458943 161 ntBASIC2.58□□□□□ -2
RNF38Q9H0F5 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.58□□□□□ -2
RNF38Q9H0F5 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.58□□□□□ -2
RNF38Q9H0F5 MIR376A2-201ENST00000636782 80 ntBASIC2.58□□□□□ -2
RNF38Q9H0F5 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
RNF38Q9H0F5 RNA5SP456-201ENST00000364002 114 ntBASIC2.57□□□□□ -2
RNF38Q9H0F5 Y_RNA.366-201ENST00000365540 102 ntBASIC2.57□□□□□ -2
RNF38Q9H0F5 MIR518F-201ENST00000384973 87 ntBASIC2.57□□□□□ -2
RNF38Q9H0F5 RNU11-5P-201ENST00000391216 129 ntBASIC2.57□□□□□ -2
RNF38Q9H0F5 AL353689.1-201ENST00000438895 199 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms