Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.56□□□□□ -2.5
TRIM4Q9C037 MTND1P17-201ENST00000448961 204 ntBASIC-0.56□□□□□ -2.5
TRIM4Q9C037 RNU6-1208P-201ENST00000459588 107 ntBASIC-0.56□□□□□ -2.5
TRIM4Q9C037 AC091959.1-201ENST00000495857 238 ntBASIC-0.56□□□□□ -2.5
TRIM4Q9C037 RNA5SP401-201ENST00000515920 127 ntBASIC-0.56□□□□□ -2.5
TRIM4Q9C037 RNU6-830P-201ENST00000516353 107 ntBASIC-0.56□□□□□ -2.5
TRIM4Q9C037 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-0.56□□□□□ -2.5
TRIM4Q9C037 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.57□□□□□ -2.5
TRIM4Q9C037 SNORD114-11-201ENST00000363738 75 ntBASIC-0.57□□□□□ -2.5
TRIM4Q9C037 SNORD14E-201ENST00000364009 85 ntBASIC-0.57□□□□□ -2.5
TRIM4Q9C037 RNU4-20P-201ENST00000365601 151 ntBASIC-0.57□□□□□ -2.5
TRIM4Q9C037 Y_RNA.405-201ENST00000383979 100 ntBASIC-0.57□□□□□ -2.5
TRIM4Q9C037 Y_RNA.451-201ENST00000384200 100 ntBASIC-0.57□□□□□ -2.5
TRIM4Q9C037 Y_RNA.524-201ENST00000384564 100 ntBASIC-0.57□□□□□ -2.5
TRIM4Q9C037 Y_RNA.561-201ENST00000384694 100 ntBASIC-0.57□□□□□ -2.5
TRIM4Q9C037 MIR802-201ENST00000390235 94 ntBASIC-0.57□□□□□ -2.5
TRIM4Q9C037 SNORA26-201ENST00000391286 122 ntBASIC-0.57□□□□□ -2.5
TRIM4Q9C037 AL512326.2-201ENST00000426359 151 ntBASIC-0.57□□□□□ -2.5
TRIM4Q9C037 USP9YP16-201ENST00000430287 407 ntBASIC-0.57□□□□□ -2.5
TRIM4Q9C037 MIR18B-201ENST00000454574 71 ntBASIC-0.57□□□□□ -2.5
TRIM4Q9C037 USP9YP23-201ENST00000455085 407 ntBASIC-0.57□□□□□ -2.5
TRIM4Q9C037 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-0.57□□□□□ -2.5
TRIM4Q9C037 RNU7-185P-201ENST00000459215 60 ntBASIC-0.57□□□□□ -2.5
TRIM4Q9C037 AC018448.1-201ENST00000552843 316 ntBASIC-0.57□□□□□ -2.5
TRIM4Q9C037 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.57□□□□□ -2.5
TRIM4Q9C037 MIR5696-201ENST00000578474 85 ntBASIC-0.57□□□□□ -2.5
TRIM4Q9C037 MIR3681-201ENST00000580089 72 ntBASIC-0.57□□□□□ -2.5
TRIM4Q9C037 AC125232.2-201ENST00000592457 143 ntBASIC-0.57□□□□□ -2.5
TRIM4Q9C037 AC099654.12-201ENST00000639868 649 ntBASIC-0.57□□□□□ -2.5
TRIM4Q9C037 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.58□□□□□ -2.5
TRIM4Q9C037 SNORA26.5-201ENST00000391215 123 ntBASIC-0.58□□□□□ -2.5
TRIM4Q9C037 MIR1257-201ENST00000408490 117 ntBASIC-0.58□□□□□ -2.5
TRIM4Q9C037 ACA59.1-201ENST00000515966 143 ntBASIC-0.58□□□□□ -2.5
TRIM4Q9C037 RNU6-469P-201ENST00000516253 101 ntBASIC-0.58□□□□□ -2.5
TRIM4Q9C037 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.58□□□□□ -2.5
TRIM4Q9C037 RNU7-181P-201ENST00000517234 74 ntBASIC-0.58□□□□□ -2.5
TRIM4Q9C037 AC022616.4-201ENST00000522985 181 ntBASIC-0.58□□□□□ -2.5
TRIM4Q9C037 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.58□□□□□ -2.5
TRIM4Q9C037 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.58□□□□□ -2.5
TRIM4Q9C037 MIR3666-201ENST00000607845 111 ntBASIC-0.58□□□□□ -2.5
TRIM4Q9C037 MIR6740-201ENST00000618268 113 ntBASIC-0.58□□□□□ -2.5
TRIM4Q9C037 MIR3674-201ENST00000636576 68 ntBASIC-0.58□□□□□ -2.5
TRIM4Q9C037 SNORA63C-201ENST00000364578 129 ntBASIC-0.59□□□□□ -2.5
TRIM4Q9C037 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.59□□□□□ -2.5
TRIM4Q9C037 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.59□□□□□ -2.5
TRIM4Q9C037 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.59□□□□□ -2.5
TRIM4Q9C037 DLEU2_5.1-201ENST00000615567 84 ntBASIC-0.59□□□□□ -2.5
TRIM4Q9C037 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.59□□□□□ -2.5
TRIM4Q9C037 AF246928.1-201ENST00000623768 87 ntBASIC-0.59□□□□□ -2.5
TRIM4Q9C037 RNU6-652P-201ENST00000365488 107 ntBASIC-0.6□□□□□ -2.51
TRIM4Q9C037 RNY3P10-201ENST00000384764 102 ntBASIC-0.6□□□□□ -2.51
TRIM4Q9C037 MIR517A-201ENST00000385001 87 ntBASIC-0.6□□□□□ -2.51
TRIM4Q9C037 RNA5SP475-201ENST00000410568 110 ntBASIC-0.6□□□□□ -2.51
TRIM4Q9C037 RPL39P34-201ENST00000477141 156 ntBASIC-0.6□□□□□ -2.51
TRIM4Q9C037 RNU6-1129P-201ENST00000515964 104 ntBASIC-0.6□□□□□ -2.51
TRIM4Q9C037 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.6□□□□□ -2.51
TRIM4Q9C037 AP001328.1-201ENST00000528550 176 ntBASIC-0.6□□□□□ -2.51
TRIM4Q9C037 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.6□□□□□ -2.51
TRIM4Q9C037 AC090617.3-201ENST00000573670 475 ntBASIC-0.6□□□□□ -2.51
TRIM4Q9C037 AC023510.2-201ENST00000622162 746 ntBASIC-0.6□□□□□ -2.51
TRIM4Q9C037 RNU6-553P-201ENST00000364047 96 ntBASIC-0.61□□□□□ -2.51
TRIM4Q9C037 RNU4-84P-201ENST00000364200 139 ntBASIC-0.61□□□□□ -2.51
TRIM4Q9C037 RNU6-128P-201ENST00000383976 107 ntBASIC-0.61□□□□□ -2.51
TRIM4Q9C037 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.61□□□□□ -2.51
TRIM4Q9C037 RNU6-855P-201ENST00000410395 104 ntBASIC-0.61□□□□□ -2.51
TRIM4Q9C037 MTND2P18-201ENST00000419962 1030 ntBASIC-0.61□□□□□ -2.51
TRIM4Q9C037 AL353193.1-201ENST00000421444 268 ntBASIC-0.61□□□□□ -2.51
TRIM4Q9C037 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-0.61□□□□□ -2.51
TRIM4Q9C037 SUMO1P3-201ENST00000439961 304 ntBASIC-0.61□□□□□ -2.51
TRIM4Q9C037 MTND1P11-201ENST00000456661 876 ntBASIC-0.61□□□□□ -2.51
TRIM4Q9C037 RNU7-125P-201ENST00000458760 62 ntBASIC-0.61□□□□□ -2.51
TRIM4Q9C037 RNU6-759P-201ENST00000516740 103 ntBASIC-0.61□□□□□ -2.51
TRIM4Q9C037 RNU6-232P-201ENST00000517144 64 ntBASIC-0.61□□□□□ -2.51
TRIM4Q9C037 AC060788.1-201ENST00000521318 469 ntBASIC-0.61□□□□□ -2.51
TRIM4Q9C037 MIR6828-201ENST00000636181 60 ntBASIC-0.61□□□□□ -2.51
TRIM4Q9C037 RNU6-161P-201ENST00000363051 106 ntBASIC-0.62□□□□□ -2.51
TRIM4Q9C037 SNORD114-3-201ENST00000364969 75 ntBASIC-0.62□□□□□ -2.51
TRIM4Q9C037 RNU6-95P-201ENST00000384697 107 ntBASIC-0.62□□□□□ -2.51
TRIM4Q9C037 RNU6-847P-201ENST00000411115 108 ntBASIC-0.62□□□□□ -2.51
TRIM4Q9C037 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.62□□□□□ -2.51
TRIM4Q9C037 USMG5P1-201ENST00000425964 177 ntBASIC-0.62□□□□□ -2.51
TRIM4Q9C037 MTCO2P19-201ENST00000427513 598 ntBASIC-0.62□□□□□ -2.51
TRIM4Q9C037 AL031667.1-201ENST00000440222 725 ntBASIC-0.62□□□□□ -2.51
TRIM4Q9C037 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.62□□□□□ -2.51
TRIM4Q9C037 RNU2-13P-201ENST00000515909 113 ntBASIC-0.62□□□□□ -2.51
TRIM4Q9C037 MTCO2P4-201ENST00000517968 247 ntBASIC-0.62□□□□□ -2.51
TRIM4Q9C037 MIR4432-201ENST00000581823 84 ntBASIC-0.62□□□□□ -2.51
TRIM4Q9C037 AC005972.2-201ENST00000604690 348 ntBASIC-0.62□□□□□ -2.51
TRIM4Q9C037 AC079248.2-201ENST00000623779 326 ntBASIC-0.62□□□□□ -2.51
TRIM4Q9C037 EIF1P2-201ENST00000428233 350 ntBASIC-0.63□□□□□ -2.51
TRIM4Q9C037 SNRPGP14-201ENST00000435400 219 ntBASIC-0.63□□□□□ -2.51
TRIM4Q9C037 MTATP6P13-201ENST00000438531 667 ntBASIC-0.63□□□□□ -2.51
TRIM4Q9C037 U8.19-201ENST00000459095 133 ntBASIC-0.63□□□□□ -2.51
TRIM4Q9C037 U8.22-201ENST00000459141 133 ntBASIC-0.63□□□□□ -2.51
TRIM4Q9C037 RNU6-625P-201ENST00000459412 107 ntBASIC-0.63□□□□□ -2.51
TRIM4Q9C037 SNORD11.1-201ENST00000459482 85 ntBASIC-0.63□□□□□ -2.51
TRIM4Q9C037 AC138869.1-201ENST00000568623 124 ntBASIC-0.63□□□□□ -2.51
TRIM4Q9C037 MIR4436A-201ENST00000585278 85 ntBASIC-0.63□□□□□ -2.51
TRIM4Q9C037 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.63□□□□□ -2.51
TRIM4Q9C037 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.64□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 278.7 ms