Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC243829.6-201ENST00000612652 106 ntBASIC0.61□□□□□ -2.31
RPAP1Q9BWH6 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.61□□□□□ -2.31
RPAP1Q9BWH6 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
RPAP1Q9BWH6 RNA5SP62-201ENST00000363457 110 ntBASIC0.6□□□□□ -2.31
RPAP1Q9BWH6 VTRNA1-3-201ENST00000365645 89 ntBASIC0.6□□□□□ -2.31
RPAP1Q9BWH6 MIR15B-201ENST00000385045 98 ntBASIC0.6□□□□□ -2.31
RPAP1Q9BWH6 RNU6-131P-201ENST00000391144 107 ntBASIC0.6□□□□□ -2.31
RPAP1Q9BWH6 AC138393.2-201ENST00000414742 246 ntBASIC0.6□□□□□ -2.31
RPAP1Q9BWH6 Y_RNA.635-201ENST00000459041 101 ntBASIC0.6□□□□□ -2.31
RPAP1Q9BWH6 U8.19-201ENST00000459095 133 ntBASIC0.6□□□□□ -2.31
RPAP1Q9BWH6 RNU6-470P-201ENST00000515954 104 ntBASIC0.6□□□□□ -2.31
RPAP1Q9BWH6 RN7SKP164-201ENST00000516138 266 ntBASIC0.6□□□□□ -2.31
RPAP1Q9BWH6 RNU7-4P-201ENST00000516961 62 ntBASIC0.6□□□□□ -2.31
RPAP1Q9BWH6 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.6□□□□□ -2.31
RPAP1Q9BWH6 RNU6-1283P-201ENST00000365314 105 ntBASIC0.59□□□□□ -2.31
RPAP1Q9BWH6 SNORA72-201ENST00000384339 132 ntBASIC0.59□□□□□ -2.31
RPAP1Q9BWH6 MIR559-201ENST00000385188 96 ntBASIC0.59□□□□□ -2.31
RPAP1Q9BWH6 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.59□□□□□ -2.31
RPAP1Q9BWH6 Y_RNA.605-201ENST00000410577 105 ntBASIC0.59□□□□□ -2.31
RPAP1Q9BWH6 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.59□□□□□ -2.31
RPAP1Q9BWH6 SNORD123-201ENST00000459473 70 ntBASIC0.59□□□□□ -2.31
RPAP1Q9BWH6 COX6CP6-201ENST00000490840 228 ntBASIC0.59□□□□□ -2.31
RPAP1Q9BWH6 RNU6-277P-201ENST00000516272 106 ntBASIC0.59□□□□□ -2.31
RPAP1Q9BWH6 SNORA20.3-201ENST00000516880 132 ntBASIC0.59□□□□□ -2.31
RPAP1Q9BWH6 AC011476.5-201ENST00000615594 130 ntBASIC0.59□□□□□ -2.31
RPAP1Q9BWH6 U6atac.1-201ENST00000616025 117 ntBASIC0.59□□□□□ -2.31
RPAP1Q9BWH6 MIR2909-201ENST00000617113 69 ntBASIC0.59□□□□□ -2.31
RPAP1Q9BWH6 SNORD116-29-201ENST00000384516 83 ntBASIC0.58□□□□□ -2.32
RPAP1Q9BWH6 SNORD78.2-201ENST00000391076 69 ntBASIC0.58□□□□□ -2.32
RPAP1Q9BWH6 SNORD99-201ENST00000408612 74 ntBASIC0.58□□□□□ -2.32
RPAP1Q9BWH6 AC096644.2-201ENST00000429278 159 ntBASIC0.58□□□□□ -2.32
RPAP1Q9BWH6 SNRPGP10-201ENST00000432323 225 ntBASIC0.58□□□□□ -2.32
RPAP1Q9BWH6 RNU11-2P-201ENST00000516898 142 ntBASIC0.58□□□□□ -2.32
RPAP1Q9BWH6 Y_RNA.714-201ENST00000517065 90 ntBASIC0.58□□□□□ -2.32
RPAP1Q9BWH6 AC036111.3-201ENST00000526389 112 ntBASIC0.58□□□□□ -2.32
RPAP1Q9BWH6 MIR4659A-201ENST00000580269 81 ntBASIC0.58□□□□□ -2.32
RPAP1Q9BWH6 AL355073.2-201ENST00000612106 557 ntBASIC0.58□□□□□ -2.32
RPAP1Q9BWH6 MTND4LP32-201ENST00000636111 270 ntBASIC0.58□□□□□ -2.32
RPAP1Q9BWH6 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
RPAP1Q9BWH6 RNA5SP48-201ENST00000363969 126 ntBASIC0.57□□□□□ -2.32
RPAP1Q9BWH6 Y_RNA.368-201ENST00000365547 113 ntBASIC0.57□□□□□ -2.32
RPAP1Q9BWH6 SNORD111-201ENST00000408139 94 ntBASIC0.57□□□□□ -2.32
RPAP1Q9BWH6 HMGN2P32-201ENST00000444648 269 ntBASIC0.57□□□□□ -2.32
RPAP1Q9BWH6 RNU6-1110P-201ENST00000516462 101 ntBASIC0.57□□□□□ -2.32
RPAP1Q9BWH6 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.57□□□□□ -2.32
RPAP1Q9BWH6 AC022441.3-201ENST00000605737 136 ntBASIC0.57□□□□□ -2.32
RPAP1Q9BWH6 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.57□□□□□ -2.32
RPAP1Q9BWH6 AC025253.1-201ENST00000613623 543 ntBASIC0.57□□□□□ -2.32
RPAP1Q9BWH6 AC084781.2-201ENST00000615568 161 ntBASIC0.57□□□□□ -2.32
RPAP1Q9BWH6 7SK.10-201ENST00000621414 298 ntBASIC0.57□□□□□ -2.32
RPAP1Q9BWH6 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.57□□□□□ -2.32
RPAP1Q9BWH6 Y_RNA.146-201ENST00000363549 102 ntBASIC0.57□□□□□ -2.32
RPAP1Q9BWH6 Y_RNA.230-201ENST00000364348 109 ntBASIC0.57□□□□□ -2.32
RPAP1Q9BWH6 Y_RNA.329-201ENST00000365209 107 ntBASIC0.57□□□□□ -2.32
RPAP1Q9BWH6 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.57□□□□□ -2.32
RPAP1Q9BWH6 RNU6-559P-201ENST00000516151 98 ntBASIC0.57□□□□□ -2.32
RPAP1Q9BWH6 RNU6-699P-201ENST00000517081 110 ntBASIC0.57□□□□□ -2.32
RPAP1Q9BWH6 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.57□□□□□ -2.32
RPAP1Q9BWH6 AC113139.1-201ENST00000605049 239 ntBASIC0.57□□□□□ -2.32
RPAP1Q9BWH6 AC134026.1-201ENST00000623249 2239 ntBASIC0.56□□□□□ -2.32
RPAP1Q9BWH6 SNORA50A-201ENST00000384225 134 ntBASIC0.56□□□□□ -2.32
RPAP1Q9BWH6 AL392103.1-201ENST00000447000 198 ntBASIC0.56□□□□□ -2.32
RPAP1Q9BWH6 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.56□□□□□ -2.32
RPAP1Q9BWH6 AC098869.1-201ENST00000481627 292 ntBASIC0.56□□□□□ -2.32
RPAP1Q9BWH6 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.56□□□□□ -2.32
RPAP1Q9BWH6 RNA5SP395-201ENST00000516567 118 ntBASIC0.56□□□□□ -2.32
RPAP1Q9BWH6 RBM11P1-201ENST00000604951 799 ntBASIC0.56□□□□□ -2.32
RPAP1Q9BWH6 RNU6-94P-201ENST00000607728 107 ntBASIC0.56□□□□□ -2.32
RPAP1Q9BWH6 U2.1-201ENST00000618978 145 ntBASIC0.56□□□□□ -2.32
RPAP1Q9BWH6 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.56□□□□□ -2.32
RPAP1Q9BWH6 AC099654.14-201ENST00000638599 341 ntBASIC0.56□□□□□ -2.32
RPAP1Q9BWH6 Y_RNA.142-201ENST00000363491 102 ntBASIC0.55□□□□□ -2.32
RPAP1Q9BWH6 Y_RNA.148-201ENST00000363557 117 ntBASIC0.55□□□□□ -2.32
RPAP1Q9BWH6 SNORD113.3-201ENST00000364630 78 ntBASIC0.55□□□□□ -2.32
RPAP1Q9BWH6 Y_RNA.303-201ENST00000364998 94 ntBASIC0.55□□□□□ -2.32
RPAP1Q9BWH6 Y_RNA.314-201ENST00000365114 102 ntBASIC0.55□□□□□ -2.32
RPAP1Q9BWH6 RNU6-1323P-201ENST00000384025 107 ntBASIC0.55□□□□□ -2.32
RPAP1Q9BWH6 Y_RNA.496-201ENST00000384444 101 ntBASIC0.55□□□□□ -2.32
RPAP1Q9BWH6 MIR1302-7-201ENST00000408841 72 ntBASIC0.55□□□□□ -2.32
RPAP1Q9BWH6 RNU6-710P-201ENST00000410424 105 ntBASIC0.55□□□□□ -2.32
RPAP1Q9BWH6 MCFD2P1-201ENST00000417812 300 ntBASIC0.55□□□□□ -2.32
RPAP1Q9BWH6 AC114737.2-201ENST00000421583 173 ntBASIC0.55□□□□□ -2.32
RPAP1Q9BWH6 Y_RNA.653-201ENST00000459091 95 ntBASIC0.55□□□□□ -2.32
RPAP1Q9BWH6 AC010655.3-201ENST00000478818 450 ntBASIC0.55□□□□□ -2.32
RPAP1Q9BWH6 Y_RNA.718-201ENST00000517110 102 ntBASIC0.55□□□□□ -2.32
RPAP1Q9BWH6 MIR548AR-201ENST00000582191 57 ntBASIC0.55□□□□□ -2.32
RPAP1Q9BWH6 AC104985.2-201ENST00000620598 500 ntBASIC0.55□□□□□ -2.32
RPAP1Q9BWH6 U6.92-201ENST00000636464 89 ntBASIC0.55□□□□□ -2.32
RPAP1Q9BWH6 SNORD81.1-201ENST00000363064 77 ntBASIC0.54□□□□□ -2.32
RPAP1Q9BWH6 Y_RNA.463-201ENST00000384271 102 ntBASIC0.54□□□□□ -2.32
RPAP1Q9BWH6 RNU6-855P-201ENST00000410395 104 ntBASIC0.54□□□□□ -2.32
RPAP1Q9BWH6 MTCO2P27-201ENST00000420740 428 ntBASIC0.54□□□□□ -2.32
RPAP1Q9BWH6 AC098614.3-201ENST00000438957 440 ntBASIC0.54□□□□□ -2.32
RPAP1Q9BWH6 AC067940.1-201ENST00000458411 300 ntBASIC0.54□□□□□ -2.32
RPAP1Q9BWH6 AC091951.2-201ENST00000500762 203 ntBASIC0.54□□□□□ -2.32
RPAP1Q9BWH6 RNU6-911P-201ENST00000516523 104 ntBASIC0.54□□□□□ -2.32
RPAP1Q9BWH6 AL132765.2-201ENST00000610812 351 ntBASIC0.54□□□□□ -2.32
RPAP1Q9BWH6 AL136317.1-201ENST00000612653 226 ntBASIC0.54□□□□□ -2.32
RPAP1Q9BWH6 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
RPAP1Q9BWH6 MIR6516-201ENST00000630554 81 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms