Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AC244015.1-201ENST00000622301 99 ntBASIC1.06□□□□□ -2.24
CHRDL1Q9BU40 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CHRDL1Q9BU40 AL391987.6-201ENST00000305671 199 ntBASIC1.05□□□□□ -2.24
CHRDL1Q9BU40 SNORA1B-201ENST00000362535 133 ntBASIC1.05□□□□□ -2.24
CHRDL1Q9BU40 SNORD27-201ENST00000363981 72 ntBASIC1.05□□□□□ -2.24
CHRDL1Q9BU40 Y_RNA.265-201ENST00000364677 108 ntBASIC1.05□□□□□ -2.24
CHRDL1Q9BU40 RNU6-200P-201ENST00000364743 107 ntBASIC1.05□□□□□ -2.24
CHRDL1Q9BU40 SNORA20.1-201ENST00000364790 130 ntBASIC1.05□□□□□ -2.24
CHRDL1Q9BU40 RNU6-117P-201ENST00000365415 107 ntBASIC1.05□□□□□ -2.24
CHRDL1Q9BU40 Y_RNA.418-201ENST00000384029 102 ntBASIC1.05□□□□□ -2.24
CHRDL1Q9BU40 Y_RNA.489-201ENST00000384410 101 ntBASIC1.05□□□□□ -2.24
CHRDL1Q9BU40 PCNPP3-201ENST00000393579 471 ntBASIC1.05□□□□□ -2.24
CHRDL1Q9BU40 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.05□□□□□ -2.24
CHRDL1Q9BU40 RNA5SP511-201ENST00000410487 115 ntBASIC1.05□□□□□ -2.24
CHRDL1Q9BU40 RN7SKP200-201ENST00000410564 320 ntBASIC1.05□□□□□ -2.24
CHRDL1Q9BU40 AC009474.2-201ENST00000451383 136 ntBASIC1.05□□□□□ -2.24
CHRDL1Q9BU40 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.05□□□□□ -2.24
CHRDL1Q9BU40 RNU7-94P-201ENST00000459576 63 ntBASIC1.05□□□□□ -2.24
CHRDL1Q9BU40 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.05□□□□□ -2.24
CHRDL1Q9BU40 RNU7-110P-201ENST00000516891 62 ntBASIC1.05□□□□□ -2.24
CHRDL1Q9BU40 RNU6-1096P-201ENST00000517089 102 ntBASIC1.05□□□□□ -2.24
CHRDL1Q9BU40 SUMO2P16-201ENST00000519475 264 ntBASIC1.05□□□□□ -2.24
CHRDL1Q9BU40 Y_RNA.772-201ENST00000606692 102 ntBASIC1.05□□□□□ -2.24
CHRDL1Q9BU40 AC011373.1-201ENST00000607270 237 ntBASIC1.05□□□□□ -2.24
CHRDL1Q9BU40 snoU13.31-201ENST00000607291 104 ntBASIC1.05□□□□□ -2.24
CHRDL1Q9BU40 ZNF209P-201ENST00000593450 2304 ntBASIC1.05□□□□□ -2.24
CHRDL1Q9BU40 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
CHRDL1Q9BU40 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.04□□□□□ -2.24
CHRDL1Q9BU40 RNU6-740P-201ENST00000364734 105 ntBASIC1.04□□□□□ -2.24
CHRDL1Q9BU40 Y_RNA.329-201ENST00000365209 107 ntBASIC1.04□□□□□ -2.24
CHRDL1Q9BU40 RNU6-290P-201ENST00000365212 101 ntBASIC1.04□□□□□ -2.24
CHRDL1Q9BU40 Y_RNA.331-201ENST00000365267 102 ntBASIC1.04□□□□□ -2.24
CHRDL1Q9BU40 Y_RNA.352-201ENST00000365439 102 ntBASIC1.04□□□□□ -2.24
CHRDL1Q9BU40 Y_RNA.478-201ENST00000384358 107 ntBASIC1.04□□□□□ -2.24
CHRDL1Q9BU40 SNORA25-201ENST00000384384 134 ntBASIC1.04□□□□□ -2.24
CHRDL1Q9BU40 Y_RNA.552-201ENST00000384665 112 ntBASIC1.04□□□□□ -2.24
CHRDL1Q9BU40 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
CHRDL1Q9BU40 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.04□□□□□ -2.24
CHRDL1Q9BU40 SERF1AP1-201ENST00000514575 187 ntBASIC1.04□□□□□ -2.24
CHRDL1Q9BU40 RNU6-1053P-201ENST00000515930 101 ntBASIC1.04□□□□□ -2.24
CHRDL1Q9BU40 RNU6-436P-201ENST00000516171 114 ntBASIC1.04□□□□□ -2.24
CHRDL1Q9BU40 SCARNA24.2-201ENST00000516968 130 ntBASIC1.04□□□□□ -2.24
CHRDL1Q9BU40 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.04□□□□□ -2.24
CHRDL1Q9BU40 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.04□□□□□ -2.24
CHRDL1Q9BU40 MIR4498-201ENST00000577599 66 ntBASIC1.04□□□□□ -2.24
CHRDL1Q9BU40 MIR4778-201ENST00000577635 80 ntBASIC1.04□□□□□ -2.24
CHRDL1Q9BU40 MIR3145-201ENST00000580727 82 ntBASIC1.04□□□□□ -2.24
CHRDL1Q9BU40 MIR4282-201ENST00000583613 67 ntBASIC1.04□□□□□ -2.24
CHRDL1Q9BU40 AC091178.2-201ENST00000584401 117 ntBASIC1.04□□□□□ -2.24
CHRDL1Q9BU40 AC022441.3-201ENST00000605737 136 ntBASIC1.04□□□□□ -2.24
CHRDL1Q9BU40 BX284668.6-201ENST00000606899 438 ntBASIC1.04□□□□□ -2.24
CHRDL1Q9BU40 Y_RNA.65-201ENST00000362846 100 ntBASIC1.03□□□□□ -2.24
CHRDL1Q9BU40 Y_RNA.122-201ENST00000363331 96 ntBASIC1.03□□□□□ -2.24
CHRDL1Q9BU40 Y_RNA.230-201ENST00000364348 109 ntBASIC1.03□□□□□ -2.24
CHRDL1Q9BU40 RNY4P28-201ENST00000365281 93 ntBASIC1.03□□□□□ -2.24
CHRDL1Q9BU40 Y_RNA.361-201ENST00000365515 120 ntBASIC1.03□□□□□ -2.24
CHRDL1Q9BU40 Y_RNA.785-201ENST00000384290 109 ntBASIC1.03□□□□□ -2.24
CHRDL1Q9BU40 AL034345.1-201ENST00000407768 123 ntBASIC1.03□□□□□ -2.24
CHRDL1Q9BU40 Y_RNA.621-201ENST00000411065 96 ntBASIC1.03□□□□□ -2.24
CHRDL1Q9BU40 CALM2P4-201ENST00000430810 426 ntBASIC1.03□□□□□ -2.24
CHRDL1Q9BU40 MTCO1P5-201ENST00000433573 344 ntBASIC1.03□□□□□ -2.24
CHRDL1Q9BU40 SUMO1P3-201ENST00000439961 304 ntBASIC1.03□□□□□ -2.24
CHRDL1Q9BU40 SUMO1P2-201ENST00000452524 304 ntBASIC1.03□□□□□ -2.24
CHRDL1Q9BU40 AC005042.3-201ENST00000453230 174 ntBASIC1.03□□□□□ -2.24
CHRDL1Q9BU40 SNORA70.12-201ENST00000516084 153 ntBASIC1.03□□□□□ -2.24
CHRDL1Q9BU40 SNORD116-28-201ENST00000516123 91 ntBASIC1.03□□□□□ -2.24
CHRDL1Q9BU40 U2.14-201ENST00000615943 113 ntBASIC1.03□□□□□ -2.24
CHRDL1Q9BU40 AC106754.2-201ENST00000623006 233 ntBASIC1.03□□□□□ -2.24
CHRDL1Q9BU40 AC027335.2-201ENST00000624030 375 ntBASIC1.03□□□□□ -2.24
CHRDL1Q9BU40 AC068647.2-201ENST00000637380 353 ntBASIC1.03□□□□□ -2.24
CHRDL1Q9BU40 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
CHRDL1Q9BU40 UBE2WP1-201ENST00000362030 340 ntBASIC1.02□□□□□ -2.25
CHRDL1Q9BU40 RNU4-90P-201ENST00000362773 141 ntBASIC1.02□□□□□ -2.25
CHRDL1Q9BU40 Y_RNA.117-201ENST00000363294 101 ntBASIC1.02□□□□□ -2.25
CHRDL1Q9BU40 Y_RNA.136-201ENST00000363444 102 ntBASIC1.02□□□□□ -2.25
CHRDL1Q9BU40 SNORA7.1-201ENST00000363750 139 ntBASIC1.02□□□□□ -2.25
CHRDL1Q9BU40 Y_RNA.217-201ENST00000364214 105 ntBASIC1.02□□□□□ -2.25
CHRDL1Q9BU40 RNU6-326P-201ENST00000365480 107 ntBASIC1.02□□□□□ -2.25
CHRDL1Q9BU40 RNU6-1080P-201ENST00000383982 107 ntBASIC1.02□□□□□ -2.25
CHRDL1Q9BU40 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
CHRDL1Q9BU40 MIR548H3-201ENST00000408771 118 ntBASIC1.02□□□□□ -2.25
CHRDL1Q9BU40 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.02□□□□□ -2.25
CHRDL1Q9BU40 RPS4XP11-201ENST00000446897 772 ntBASIC1.02□□□□□ -2.25
CHRDL1Q9BU40 RNU1-123P-201ENST00000458950 160 ntBASIC1.02□□□□□ -2.25
CHRDL1Q9BU40 Y_RNA.641-201ENST00000459414 105 ntBASIC1.02□□□□□ -2.25
CHRDL1Q9BU40 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.02□□□□□ -2.25
CHRDL1Q9BU40 RNU6-341P-201ENST00000516973 96 ntBASIC1.02□□□□□ -2.25
CHRDL1Q9BU40 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.02□□□□□ -2.25
CHRDL1Q9BU40 AC068338.1-201ENST00000565567 176 ntBASIC1.02□□□□□ -2.25
CHRDL1Q9BU40 DEFB117-201ENST00000602356 141 ntBASIC1.02□□□□□ -2.25
CHRDL1Q9BU40 HSPE1P19-201ENST00000603327 295 ntBASIC1.02□□□□□ -2.25
CHRDL1Q9BU40 AL022345.2-201ENST00000606307 135 ntBASIC1.02□□□□□ -2.25
CHRDL1Q9BU40 SNORD113-5-201ENST00000607261 78 ntBASIC1.02□□□□□ -2.25
CHRDL1Q9BU40 AL157834.3-201ENST00000615543 103 ntBASIC1.02□□□□□ -2.25
CHRDL1Q9BU40 FTX_2.1-201ENST00000618816 94 ntBASIC1.02□□□□□ -2.25
CHRDL1Q9BU40 SNORD3E-202ENST00000627253 216 ntBASIC1.02□□□□□ -2.25
CHRDL1Q9BU40 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CHRDL1Q9BU40 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CHRDL1Q9BU40 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
CHRDL1Q9BU40 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 215.5 ms