Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 RNU1-92P-201ENST00000517017 135 ntBASIC1.13□□□□□ -2.23
EBF4Q9BQW3 RNU6-548P-201ENST00000517083 115 ntBASIC1.13□□□□□ -2.23
EBF4Q9BQW3 RNU6-1096P-201ENST00000517089 102 ntBASIC1.13□□□□□ -2.23
EBF4Q9BQW3 MIR4524B-201ENST00000581569 115 ntBASIC1.13□□□□□ -2.23
EBF4Q9BQW3 MIR4422-201ENST00000581938 83 ntBASIC1.13□□□□□ -2.23
EBF4Q9BQW3 MIR4282-201ENST00000583613 67 ntBASIC1.13□□□□□ -2.23
EBF4Q9BQW3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.13□□□□□ -2.23
EBF4Q9BQW3 AC005357.1-201ENST00000588399 301 ntBASIC1.13□□□□□ -2.23
EBF4Q9BQW3 AC242852.1-201ENST00000612151 96 ntBASIC1.13□□□□□ -2.23
EBF4Q9BQW3 AC244015.1-201ENST00000622301 99 ntBASIC1.13□□□□□ -2.23
EBF4Q9BQW3 AC018630.2-201ENST00000534866 2403 ntBASIC1.13□□□□□ -2.23
EBF4Q9BQW3 Y_RNA.20-201ENST00000362479 113 ntBASIC1.12□□□□□ -2.23
EBF4Q9BQW3 SNORA1B-201ENST00000362535 133 ntBASIC1.12□□□□□ -2.23
EBF4Q9BQW3 RNA5SP99-201ENST00000364020 114 ntBASIC1.12□□□□□ -2.23
EBF4Q9BQW3 Y_RNA.352-201ENST00000365439 102 ntBASIC1.12□□□□□ -2.23
EBF4Q9BQW3 Y_RNA.456-201ENST00000384232 111 ntBASIC1.12□□□□□ -2.23
EBF4Q9BQW3 SNORD58.1-201ENST00000391313 66 ntBASIC1.12□□□□□ -2.23
EBF4Q9BQW3 AC108210.2-201ENST00000503681 201 ntBASIC1.12□□□□□ -2.23
EBF4Q9BQW3 RNU7-115P-201ENST00000516433 55 ntBASIC1.12□□□□□ -2.23
EBF4Q9BQW3 RNU6-1116P-201ENST00000517269 99 ntBASIC1.12□□□□□ -2.23
EBF4Q9BQW3 POLR3GP1-201ENST00000594073 261 ntBASIC1.12□□□□□ -2.23
EBF4Q9BQW3 AC005972.2-201ENST00000604690 348 ntBASIC1.12□□□□□ -2.23
EBF4Q9BQW3 AL365434.2-201ENST00000607979 234 ntBASIC1.12□□□□□ -2.23
EBF4Q9BQW3 AC090425.1-201ENST00000610007 140 ntBASIC1.12□□□□□ -2.23
EBF4Q9BQW3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.12□□□□□ -2.23
EBF4Q9BQW3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.12□□□□□ -2.23
EBF4Q9BQW3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
EBF4Q9BQW3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
EBF4Q9BQW3 SNORD114-7-201ENST00000362520 77 ntBASIC1.11□□□□□ -2.23
EBF4Q9BQW3 SNORA20.1-201ENST00000364790 130 ntBASIC1.11□□□□□ -2.23
EBF4Q9BQW3 Y_RNA.292-201ENST00000364904 97 ntBASIC1.11□□□□□ -2.23
EBF4Q9BQW3 RNY4P28-201ENST00000365281 93 ntBASIC1.11□□□□□ -2.23
EBF4Q9BQW3 Y_RNA.401-201ENST00000383965 117 ntBASIC1.11□□□□□ -2.23
EBF4Q9BQW3 RNU6-514P-201ENST00000384208 107 ntBASIC1.11□□□□□ -2.23
EBF4Q9BQW3 MIR513A1-201ENST00000385138 129 ntBASIC1.11□□□□□ -2.23
EBF4Q9BQW3 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.11□□□□□ -2.23
EBF4Q9BQW3 SNORA36B-201ENST00000410438 131 ntBASIC1.11□□□□□ -2.23
EBF4Q9BQW3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.11□□□□□ -2.23
EBF4Q9BQW3 Z98949.2-201ENST00000440996 144 ntBASIC1.11□□□□□ -2.23
EBF4Q9BQW3 AC245517.4-201ENST00000448601 281 ntBASIC1.11□□□□□ -2.23
EBF4Q9BQW3 SNORD2.1-201ENST00000458762 69 ntBASIC1.11□□□□□ -2.23
EBF4Q9BQW3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.11□□□□□ -2.23
EBF4Q9BQW3 AC079140.2-201ENST00000506193 142 ntBASIC1.11□□□□□ -2.23
EBF4Q9BQW3 SNORA70.12-201ENST00000516084 153 ntBASIC1.11□□□□□ -2.23
EBF4Q9BQW3 RNU6-902P-201ENST00000517212 91 ntBASIC1.11□□□□□ -2.23
EBF4Q9BQW3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.11□□□□□ -2.23
EBF4Q9BQW3 AC011604.1-201ENST00000545978 196 ntBASIC1.11□□□□□ -2.23
EBF4Q9BQW3 AC015712.3-201ENST00000559380 164 ntBASIC1.11□□□□□ -2.23
EBF4Q9BQW3 MIR3684-201ENST00000579779 74 ntBASIC1.11□□□□□ -2.23
EBF4Q9BQW3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.11□□□□□ -2.23
EBF4Q9BQW3 AL162424.1-201ENST00000602325 221 ntBASIC1.11□□□□□ -2.23
EBF4Q9BQW3 AP003357.1-201ENST00000604497 148 ntBASIC1.11□□□□□ -2.23
EBF4Q9BQW3 AC013791.1-201ENST00000616619 62 ntBASIC1.11□□□□□ -2.23
EBF4Q9BQW3 Y_RNA.82-201ENST00000363000 102 ntBASIC1.1□□□□□ -2.23
EBF4Q9BQW3 Y_RNA.92-201ENST00000363043 102 ntBASIC1.1□□□□□ -2.23
EBF4Q9BQW3 snoU2_19.4-201ENST00000364329 80 ntBASIC1.1□□□□□ -2.23
EBF4Q9BQW3 Y_RNA.235-201ENST00000364412 102 ntBASIC1.1□□□□□ -2.23
EBF4Q9BQW3 RNU4-41P-201ENST00000364426 143 ntBASIC1.1□□□□□ -2.23
EBF4Q9BQW3 Y_RNA.274-201ENST00000364714 101 ntBASIC1.1□□□□□ -2.23
EBF4Q9BQW3 RNU6-923P-201ENST00000364753 107 ntBASIC1.1□□□□□ -2.23
EBF4Q9BQW3 Y_RNA.306-201ENST00000365015 102 ntBASIC1.1□□□□□ -2.23
EBF4Q9BQW3 Y_RNA.312-201ENST00000365089 102 ntBASIC1.1□□□□□ -2.23
EBF4Q9BQW3 Y_RNA.322-201ENST00000365151 102 ntBASIC1.1□□□□□ -2.23
EBF4Q9BQW3 RNU6-1323P-201ENST00000384025 107 ntBASIC1.1□□□□□ -2.23
EBF4Q9BQW3 RNU6-710P-201ENST00000410424 105 ntBASIC1.1□□□□□ -2.23
EBF4Q9BQW3 AC024067.1-201ENST00000426199 223 ntBASIC1.1□□□□□ -2.23
EBF4Q9BQW3 Y_RNA.650-201ENST00000459002 102 ntBASIC1.1□□□□□ -2.23
EBF4Q9BQW3 SCARNA8-201ENST00000515924 131 ntBASIC1.1□□□□□ -2.23
EBF4Q9BQW3 RNU6-453P-201ENST00000516819 85 ntBASIC1.1□□□□□ -2.23
EBF4Q9BQW3 Y_RNA.777-201ENST00000516982 102 ntBASIC1.1□□□□□ -2.23
EBF4Q9BQW3 SUMO2P16-201ENST00000519475 264 ntBASIC1.1□□□□□ -2.23
EBF4Q9BQW3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.1□□□□□ -2.23
EBF4Q9BQW3 AC127455.1-201ENST00000565496 145 ntBASIC1.1□□□□□ -2.23
EBF4Q9BQW3 AC130289.1-201ENST00000577321 73 ntBASIC1.1□□□□□ -2.23
EBF4Q9BQW3 MIR5692C2-201ENST00000577959 77 ntBASIC1.1□□□□□ -2.23
EBF4Q9BQW3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.1□□□□□ -2.23
EBF4Q9BQW3 Y_RNA.771-201ENST00000598668 102 ntBASIC1.1□□□□□ -2.23
EBF4Q9BQW3 MIR548AY-201ENST00000617669 107 ntBASIC1.1□□□□□ -2.23
EBF4Q9BQW3 AL365265.1-201ENST00000621045 234 ntBASIC1.1□□□□□ -2.23
EBF4Q9BQW3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.1□□□□□ -2.23
EBF4Q9BQW3 Y_RNA.789-201ENST00000622480 102 ntBASIC1.1□□□□□ -2.23
EBF4Q9BQW3 RNU6-1123P-201ENST00000362347 106 ntBASIC1.09□□□□□ -2.23
EBF4Q9BQW3 Y_RNA.24-201ENST00000362508 103 ntBASIC1.09□□□□□ -2.23
EBF4Q9BQW3 RNU6-653P-201ENST00000363074 106 ntBASIC1.09□□□□□ -2.23
EBF4Q9BQW3 RNA5SP259-201ENST00000365541 109 ntBASIC1.09□□□□□ -2.23
EBF4Q9BQW3 RNU6-47P-201ENST00000383866 107 ntBASIC1.09□□□□□ -2.23
EBF4Q9BQW3 MT-TG-201ENST00000387429 68 ntBASIC1.09□□□□□ -2.23
EBF4Q9BQW3 MT-TT-201ENST00000387460 66 ntBASIC1.09□□□□□ -2.23
EBF4Q9BQW3 Y_RNA.590-201ENST00000410140 107 ntBASIC1.09□□□□□ -2.23
EBF4Q9BQW3 RN7SKP200-201ENST00000410564 320 ntBASIC1.09□□□□□ -2.23
EBF4Q9BQW3 SNRPGP10-201ENST00000432323 225 ntBASIC1.09□□□□□ -2.23
EBF4Q9BQW3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.09□□□□□ -2.23
EBF4Q9BQW3 STAG3L5P-204ENST00000443759 179 ntBASIC1.09□□□□□ -2.23
EBF4Q9BQW3 SUMO1P2-201ENST00000452524 304 ntBASIC1.09□□□□□ -2.23
EBF4Q9BQW3 Y_RNA.638-201ENST00000459374 113 ntBASIC1.09□□□□□ -2.23
EBF4Q9BQW3 RPL23AP54-201ENST00000495129 419 ntBASIC1.09□□□□□ -2.23
EBF4Q9BQW3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.09□□□□□ -2.23
EBF4Q9BQW3 RNU6-1278P-201ENST00000516130 107 ntBASIC1.09□□□□□ -2.23
EBF4Q9BQW3 Y_RNA.679-201ENST00000516416 91 ntBASIC1.09□□□□□ -2.23
EBF4Q9BQW3 RNU6-341P-201ENST00000516973 96 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms