Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 RNU6-1272P-201ENST00000362776 107 ntBASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 Y_RNA.352-201ENST00000365439 102 ntBASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 Y_RNA.401-201ENST00000383965 117 ntBASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 RNU6-1323P-201ENST00000384025 107 ntBASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 Y_RNA.447-201ENST00000384184 113 ntBASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 MIR520G-201ENST00000385064 90 ntBASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 AC104332.1-201ENST00000440471 797 ntBASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 RNU7-141P-201ENST00000459304 62 ntBASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 Y_RNA.680-201ENST00000516441 93 ntBASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 MIR4643-201ENST00000577473 78 ntBASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 AC022709.1-201ENST00000615967 87 ntBASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 MIR6515-201ENST00000619843 57 ntBASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.55□□□□□ -2.16
RTP3Q9BQQ7 SNORD27-201ENST00000363981 72 ntBASIC1.54□□□□□ -2.16
RTP3Q9BQQ7 Y_RNA.416-201ENST00000384014 113 ntBASIC1.54□□□□□ -2.16
RTP3Q9BQQ7 MIR320A-201ENST00000385302 82 ntBASIC1.54□□□□□ -2.16
RTP3Q9BQQ7 MIR548H3-201ENST00000408771 118 ntBASIC1.54□□□□□ -2.16
RTP3Q9BQQ7 Y_RNA.621-201ENST00000411065 96 ntBASIC1.54□□□□□ -2.16
RTP3Q9BQQ7 COX6CP10-201ENST00000416832 224 ntBASIC1.54□□□□□ -2.16
RTP3Q9BQQ7 BTF3P11-201ENST00000426582 477 ntBASIC1.54□□□□□ -2.16
RTP3Q9BQQ7 RNU7-115P-201ENST00000516433 55 ntBASIC1.54□□□□□ -2.16
RTP3Q9BQQ7 AC024405.2-202ENST00000532731 184 ntBASIC1.54□□□□□ -2.16
RTP3Q9BQQ7 MIR4285-201ENST00000581001 85 ntBASIC1.54□□□□□ -2.16
RTP3Q9BQQ7 AP000942.4-201ENST00000604811 241 ntBASIC1.54□□□□□ -2.16
RTP3Q9BQQ7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.54□□□□□ -2.16
RTP3Q9BQQ7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.54□□□□□ -2.16
RTP3Q9BQQ7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
RTP3Q9BQQ7 SNORA1B-201ENST00000362535 133 ntBASIC1.53□□□□□ -2.16
RTP3Q9BQQ7 RNU6-53P-201ENST00000365367 106 ntBASIC1.53□□□□□ -2.16
RTP3Q9BQQ7 RNU6-1080P-201ENST00000383982 107 ntBASIC1.53□□□□□ -2.16
RTP3Q9BQQ7 RNU6-950P-201ENST00000384651 107 ntBASIC1.53□□□□□ -2.16
RTP3Q9BQQ7 MIR562-201ENST00000384894 95 ntBASIC1.53□□□□□ -2.16
RTP3Q9BQQ7 SNORA12.1-201ENST00000390873 148 ntBASIC1.53□□□□□ -2.16
RTP3Q9BQQ7 RN7SKP200-201ENST00000410564 320 ntBASIC1.53□□□□□ -2.16
RTP3Q9BQQ7 RNU7-116P-201ENST00000516940 62 ntBASIC1.53□□□□□ -2.16
RTP3Q9BQQ7 MIR4709-201ENST00000577272 72 ntBASIC1.53□□□□□ -2.16
RTP3Q9BQQ7 AL162424.1-201ENST00000602325 221 ntBASIC1.53□□□□□ -2.16
RTP3Q9BQQ7 AP003357.1-201ENST00000604497 148 ntBASIC1.53□□□□□ -2.16
RTP3Q9BQQ7 AL008718.3-201ENST00000610217 321 ntBASIC1.53□□□□□ -2.16
RTP3Q9BQQ7 MIR8074-201ENST00000615081 81 ntBASIC1.53□□□□□ -2.16
RTP3Q9BQQ7 AL078604.3-201ENST00000615580 211 ntBASIC1.53□□□□□ -2.16
RTP3Q9BQQ7 MIR548AY-201ENST00000617669 107 ntBASIC1.53□□□□□ -2.16
RTP3Q9BQQ7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.53□□□□□ -2.17
RTP3Q9BQQ7 AC100821.1-201ENST00000523153 2479 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.60-201ENST00000362831 98 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 RNU6-899P-201ENST00000363947 107 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 RNU6-203P-201ENST00000384038 104 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 RNU6-211P-201ENST00000384047 107 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 SNORA72-201ENST00000384339 132 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 RNU6-1031P-201ENST00000384773 107 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.590-201ENST00000410140 107 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 SNORA36B-201ENST00000410438 131 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 AL049830.1-201ENST00000468034 425 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 AC099513.1-201ENST00000490423 301 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 RPL23AP54-201ENST00000495129 419 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.679-201ENST00000516416 91 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 AP002004.2-201ENST00000531656 154 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 MIR5692C2-201ENST00000577959 77 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 AC013791.1-201ENST00000616619 62 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 MIR6779-201ENST00000617283 64 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 AC095038.3-201ENST00000634439 195 ntBASIC1.52□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.65-201ENST00000362846 100 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 RNU6-414P-201ENST00000363705 104 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.188-201ENST00000363952 111 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 SNORA20.1-201ENST00000364790 130 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.618-201ENST00000410949 107 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 FTH1P12-201ENST00000432137 551 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 JTBP1-201ENST00000441314 247 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 RNU7-34P-201ENST00000459394 64 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 RNU2-56P-201ENST00000516826 190 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 RNU6-1271P-201ENST00000517049 105 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 AL358944.1-201ENST00000528537 144 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 AC127455.1-201ENST00000565496 145 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 SNORA77B-201ENST00000578179 125 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 AC006006.1-201ENST00000603082 144 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 BX284668.6-201ENST00000606899 438 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 AC021506.2-201ENST00000612354 169 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 AC068700.1-201ENST00000565862 3754 ntBASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
RTP3Q9BQQ7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.20-201ENST00000362479 113 ntBASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.76-201ENST00000362931 109 ntBASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.82-201ENST00000363000 102 ntBASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.92-201ENST00000363043 102 ntBASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 RNU6-1205P-201ENST00000363625 106 ntBASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.235-201ENST00000364412 102 ntBASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.265-201ENST00000364677 108 ntBASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.306-201ENST00000365015 102 ntBASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.312-201ENST00000365089 102 ntBASIC1.5□□□□□ -2.17
RTP3Q9BQQ7 Y_RNA.322-201ENST00000365151 102 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 213.7 ms