Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
USB1Q9BQ65 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.37□□□□□ -1.87
USB1Q9BQ65 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.37□□□□□ -1.87
USB1Q9BQ65 Y_RNA.191-201ENST00000363972 113 ntBASIC3.37□□□□□ -1.87
USB1Q9BQ65 AL034345.1-201ENST00000407768 123 ntBASIC3.37□□□□□ -1.87
USB1Q9BQ65 AC090844.1-201ENST00000422019 156 ntBASIC3.37□□□□□ -1.87
USB1Q9BQ65 AC023632.4-201ENST00000517783 191 ntBASIC3.37□□□□□ -1.87
USB1Q9BQ65 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.37□□□□□ -1.87
USB1Q9BQ65 MIR6717-201ENST00000622747 73 ntBASIC3.37□□□□□ -1.87
USB1Q9BQ65 MIR548BB-201ENST00000626714 66 ntBASIC3.37□□□□□ -1.87
USB1Q9BQ65 MIR7153-201ENST00000637758 57 ntBASIC3.37□□□□□ -1.87
USB1Q9BQ65 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.37□□□□□ -1.87
USB1Q9BQ65 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
USB1Q9BQ65 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
USB1Q9BQ65 AL021368.2-201ENST00000606125 5352 ntBASIC3.36□□□□□ -1.87
USB1Q9BQ65 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
USB1Q9BQ65 RNU6-1019P-201ENST00000364424 107 ntBASIC3.36□□□□□ -1.87
USB1Q9BQ65 MIR449B-201ENST00000384995 97 ntBASIC3.36□□□□□ -1.87
USB1Q9BQ65 MIR516B2-201ENST00000385190 85 ntBASIC3.36□□□□□ -1.87
USB1Q9BQ65 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.36□□□□□ -1.87
USB1Q9BQ65 AC073261.1-201ENST00000429409 121 ntBASIC3.36□□□□□ -1.87
USB1Q9BQ65 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.36□□□□□ -1.87
USB1Q9BQ65 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.36□□□□□ -1.87
USB1Q9BQ65 RPS29P29-201ENST00000456396 171 ntBASIC3.36□□□□□ -1.87
USB1Q9BQ65 RNU7-12P-201ENST00000516030 62 ntBASIC3.36□□□□□ -1.87
USB1Q9BQ65 RNA5SP168-201ENST00000516642 112 ntBASIC3.36□□□□□ -1.87
USB1Q9BQ65 RNU1-45P-201ENST00000517191 141 ntBASIC3.36□□□□□ -1.87
USB1Q9BQ65 MIR1254-2-201ENST00000579553 63 ntBASIC3.36□□□□□ -1.87
USB1Q9BQ65 MIR3158-1-201ENST00000583596 81 ntBASIC3.36□□□□□ -1.87
USB1Q9BQ65 MIR3616-201ENST00000584070 92 ntBASIC3.36□□□□□ -1.87
USB1Q9BQ65 AC069114.2-201ENST00000604699 304 ntBASIC3.36□□□□□ -1.87
USB1Q9BQ65 MIR4791-201ENST00000607666 84 ntBASIC3.36□□□□□ -1.87
USB1Q9BQ65 AC103810.7-201ENST00000607821 91 ntBASIC3.36□□□□□ -1.87
USB1Q9BQ65 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.36□□□□□ -1.87
USB1Q9BQ65 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
USB1Q9BQ65 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
USB1Q9BQ65 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
USB1Q9BQ65 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
USB1Q9BQ65 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.36□□□□□ -1.87
USB1Q9BQ65 SNORD115-3-201ENST00000363100 82 ntBASIC3.35□□□□□ -1.87
USB1Q9BQ65 RNU6-509P-201ENST00000363519 107 ntBASIC3.35□□□□□ -1.87
USB1Q9BQ65 RNU6-461P-201ENST00000364195 107 ntBASIC3.35□□□□□ -1.87
USB1Q9BQ65 RNU6-776P-201ENST00000364403 104 ntBASIC3.35□□□□□ -1.87
USB1Q9BQ65 Y_RNA.247-201ENST00000364500 92 ntBASIC3.35□□□□□ -1.87
USB1Q9BQ65 RNU6-1022P-201ENST00000365049 104 ntBASIC3.35□□□□□ -1.87
USB1Q9BQ65 HSPE1P9-201ENST00000440046 311 ntBASIC3.35□□□□□ -1.87
USB1Q9BQ65 SNORD105B-201ENST00000458770 79 ntBASIC3.35□□□□□ -1.87
USB1Q9BQ65 SNORA84-201ENST00000459229 133 ntBASIC3.35□□□□□ -1.87
USB1Q9BQ65 RN7SL542P-201ENST00000467147 294 ntBASIC3.35□□□□□ -1.87
USB1Q9BQ65 SNORA67.7-201ENST00000516664 135 ntBASIC3.35□□□□□ -1.87
USB1Q9BQ65 AC005786.1-201ENST00000588553 154 ntBASIC3.35□□□□□ -1.87
USB1Q9BQ65 RNU6-86P-201ENST00000606534 107 ntBASIC3.35□□□□□ -1.87
USB1Q9BQ65 U4atac.1-201ENST00000618345 95 ntBASIC3.35□□□□□ -1.87
USB1Q9BQ65 MIR6075-201ENST00000620782 95 ntBASIC3.35□□□□□ -1.87
USB1Q9BQ65 RNU6-1190P-201ENST00000410811 104 ntBASIC3.34□□□□□ -1.87
USB1Q9BQ65 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.34□□□□□ -1.87
USB1Q9BQ65 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
USB1Q9BQ65 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
USB1Q9BQ65 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
USB1Q9BQ65 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
USB1Q9BQ65 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
USB1Q9BQ65 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
USB1Q9BQ65 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.33□□□□□ -1.88
USB1Q9BQ65 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
USB1Q9BQ65 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
USB1Q9BQ65 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
USB1Q9BQ65 MIR23B-201ENST00000384832 97 ntBASIC3.33□□□□□ -1.88
USB1Q9BQ65 MIR452-201ENST00000385020 85 ntBASIC3.33□□□□□ -1.88
USB1Q9BQ65 RPS12P2-201ENST00000439728 269 ntBASIC3.33□□□□□ -1.88
USB1Q9BQ65 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.33□□□□□ -1.88
USB1Q9BQ65 UBL5P1-201ENST00000507979 193 ntBASIC3.33□□□□□ -1.88
USB1Q9BQ65 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.33□□□□□ -1.88
USB1Q9BQ65 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.33□□□□□ -1.88
USB1Q9BQ65 AC087499.8-201ENST00000578406 226 ntBASIC3.33□□□□□ -1.88
USB1Q9BQ65 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
USB1Q9BQ65 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
USB1Q9BQ65 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
USB1Q9BQ65 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.32□□□□□ -1.88
USB1Q9BQ65 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
USB1Q9BQ65 RNU6-633P-201ENST00000362612 103 ntBASIC3.32□□□□□ -1.88
USB1Q9BQ65 Y_RNA.140-201ENST00000363474 103 ntBASIC3.32□□□□□ -1.88
USB1Q9BQ65 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
USB1Q9BQ65 SNORA24-201ENST00000384096 131 ntBASIC3.32□□□□□ -1.88
USB1Q9BQ65 MIR136-201ENST00000385207 82 ntBASIC3.32□□□□□ -1.88
USB1Q9BQ65 Y_RNA.607-201ENST00000410597 98 ntBASIC3.32□□□□□ -1.88
USB1Q9BQ65 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.32□□□□□ -1.88
USB1Q9BQ65 RNU7-2P-201ENST00000516096 62 ntBASIC3.32□□□□□ -1.88
USB1Q9BQ65 AC026271.5-201ENST00000577873 130 ntBASIC3.32□□□□□ -1.88
USB1Q9BQ65 MIR4425-201ENST00000580572 84 ntBASIC3.32□□□□□ -1.88
USB1Q9BQ65 AL137849.1-201ENST00000604767 169 ntBASIC3.32□□□□□ -1.88
USB1Q9BQ65 AL020996.3-201ENST00000606617 222 ntBASIC3.32□□□□□ -1.88
USB1Q9BQ65 MIR7851-201ENST00000610611 160 ntBASIC3.32□□□□□ -1.88
USB1Q9BQ65 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
USB1Q9BQ65 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
USB1Q9BQ65 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
USB1Q9BQ65 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
USB1Q9BQ65 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.32□□□□□ -1.88
USB1Q9BQ65 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.31□□□□□ -1.88
USB1Q9BQ65 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
USB1Q9BQ65 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms