Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
VRK1Q99986 MIR21-201ENST00000362134 72 ntBASIC2.03□□□□□ -2.08
VRK1Q99986 SNORD50B-201ENST00000364995 70 ntBASIC2.03□□□□□ -2.08
VRK1Q99986 snoU2-30.1-201ENST00000365012 70 ntBASIC2.03□□□□□ -2.08
VRK1Q99986 RNA5SP37-201ENST00000365420 130 ntBASIC2.03□□□□□ -2.08
VRK1Q99986 RNU6-424P-201ENST00000384367 105 ntBASIC2.03□□□□□ -2.08
VRK1Q99986 Y_RNA.622-201ENST00000411091 108 ntBASIC2.03□□□□□ -2.08
VRK1Q99986 RNU7-34P-201ENST00000459394 64 ntBASIC2.03□□□□□ -2.08
VRK1Q99986 AC099513.1-201ENST00000490423 301 ntBASIC2.03□□□□□ -2.08
VRK1Q99986 CYCTP-201ENST00000504253 315 ntBASIC2.03□□□□□ -2.08
VRK1Q99986 AC074198.2-201ENST00000508153 258 ntBASIC2.03□□□□□ -2.08
VRK1Q99986 RNA5SP281-201ENST00000516504 135 ntBASIC2.03□□□□□ -2.08
VRK1Q99986 MIR4448-201ENST00000584360 86 ntBASIC2.03□□□□□ -2.08
VRK1Q99986 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.03□□□□□ -2.08
VRK1Q99986 AL513423.1-201ENST00000621695 132 ntBASIC2.03□□□□□ -2.08
VRK1Q99986 MIR6873-201ENST00000622788 63 ntBASIC2.03□□□□□ -2.08
VRK1Q99986 ZNF658B-202ENST00000615961 3375 ntBASIC2.02□□□□□ -2.09
VRK1Q99986 RNU6-1084P-201ENST00000362498 107 ntBASIC2.02□□□□□ -2.09
VRK1Q99986 Y_RNA.432-201ENST00000384087 111 ntBASIC2.02□□□□□ -2.09
VRK1Q99986 SNORA26-201ENST00000391286 122 ntBASIC2.02□□□□□ -2.09
VRK1Q99986 SNORA3.2-201ENST00000408221 125 ntBASIC2.02□□□□□ -2.09
VRK1Q99986 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.02□□□□□ -2.09
VRK1Q99986 SNORA79-201ENST00000408376 140 ntBASIC2.02□□□□□ -2.09
VRK1Q99986 RNU6-1135P-201ENST00000411083 103 ntBASIC2.02□□□□□ -2.09
VRK1Q99986 AL356379.1-201ENST00000414105 126 ntBASIC2.02□□□□□ -2.09
VRK1Q99986 MRPS17P9-201ENST00000511924 393 ntBASIC2.02□□□□□ -2.09
VRK1Q99986 RNA5SP168-201ENST00000516642 112 ntBASIC2.02□□□□□ -2.09
VRK1Q99986 RNU6-197P-201ENST00000516680 100 ntBASIC2.02□□□□□ -2.09
VRK1Q99986 RNU6-1212P-201ENST00000517023 104 ntBASIC2.02□□□□□ -2.09
VRK1Q99986 MIR4713-201ENST00000582691 75 ntBASIC2.02□□□□□ -2.09
VRK1Q99986 AC097639.2-201ENST00000603159 172 ntBASIC2.02□□□□□ -2.09
VRK1Q99986 AC120024.3-201ENST00000603167 156 ntBASIC2.02□□□□□ -2.09
VRK1Q99986 AC067747.1-201ENST00000608026 250 ntBASIC2.02□□□□□ -2.09
VRK1Q99986 MIR1291-201ENST00000627649 87 ntBASIC2.02□□□□□ -2.09
VRK1Q99986 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
VRK1Q99986 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.02□□□□□ -2.09
VRK1Q99986 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
VRK1Q99986 RNU4-84P-201ENST00000364200 139 ntBASIC2.01□□□□□ -2.09
VRK1Q99986 Y_RNA.336-201ENST00000365307 109 ntBASIC2.01□□□□□ -2.09
VRK1Q99986 Y_RNA.357-201ENST00000365487 109 ntBASIC2.01□□□□□ -2.09
VRK1Q99986 RNU6-643P-201ENST00000384018 107 ntBASIC2.01□□□□□ -2.09
VRK1Q99986 RNU6-394P-201ENST00000410735 107 ntBASIC2.01□□□□□ -2.09
VRK1Q99986 RNU5E-9P-201ENST00000411164 104 ntBASIC2.01□□□□□ -2.09
VRK1Q99986 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.01□□□□□ -2.09
VRK1Q99986 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.01□□□□□ -2.09
VRK1Q99986 CALM2P4-201ENST00000430810 426 ntBASIC2.01□□□□□ -2.09
VRK1Q99986 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.01□□□□□ -2.09
VRK1Q99986 SEPT7P4-201ENST00000437076 306 ntBASIC2.01□□□□□ -2.09
VRK1Q99986 HMGN2P32-201ENST00000444648 269 ntBASIC2.01□□□□□ -2.09
VRK1Q99986 RPL23AP6-201ENST00000446637 472 ntBASIC2.01□□□□□ -2.09
VRK1Q99986 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.01□□□□□ -2.09
VRK1Q99986 SNORD45.4-201ENST00000516629 73 ntBASIC2.01□□□□□ -2.09
VRK1Q99986 MIR4299-201ENST00000577899 72 ntBASIC2.01□□□□□ -2.09
VRK1Q99986 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
VRK1Q99986 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VRK1Q99986 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2□□□□□ -2.09
VRK1Q99986 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2□□□□□ -2.09
VRK1Q99986 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VRK1Q99986 RNU6-661P-201ENST00000362409 107 ntBASIC2□□□□□ -2.09
VRK1Q99986 RNU6-833P-201ENST00000363486 107 ntBASIC2□□□□□ -2.09
VRK1Q99986 SNORD72-201ENST00000390994 80 ntBASIC2□□□□□ -2.09
VRK1Q99986 U8.16-201ENST00000391279 133 ntBASIC2□□□□□ -2.09
VRK1Q99986 PGBD4P5-201ENST00000445958 426 ntBASIC2□□□□□ -2.09
VRK1Q99986 AC104984.5-201ENST00000586878 94 ntBASIC2□□□□□ -2.09
VRK1Q99986 AC103810.6-201ENST00000606708 136 ntBASIC2□□□□□ -2.09
VRK1Q99986 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2□□□□□ -2.09
VRK1Q99986 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VRK1Q99986 AL359851.1-201ENST00000569460 4997 ntBASIC1.99□□□□□ -2.09
VRK1Q99986 SNORD14E-201ENST00000364009 85 ntBASIC1.99□□□□□ -2.09
VRK1Q99986 Y_RNA.634-201ENST00000364811 113 ntBASIC1.99□□□□□ -2.09
VRK1Q99986 RNU6-442P-201ENST00000383968 104 ntBASIC1.99□□□□□ -2.09
VRK1Q99986 Y_RNA.486-201ENST00000384398 107 ntBASIC1.99□□□□□ -2.09
VRK1Q99986 RNU6-239P-201ENST00000390990 99 ntBASIC1.99□□□□□ -2.09
VRK1Q99986 RNA5SP233-201ENST00000459153 113 ntBASIC1.99□□□□□ -2.09
VRK1Q99986 AC114811.1-201ENST00000507207 168 ntBASIC1.99□□□□□ -2.09
VRK1Q99986 AC107027.2-201ENST00000512197 115 ntBASIC1.99□□□□□ -2.09
VRK1Q99986 RNU7-121P-201ENST00000516604 62 ntBASIC1.99□□□□□ -2.09
VRK1Q99986 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.99□□□□□ -2.09
VRK1Q99986 AC002984.1-201ENST00000591692 448 ntBASIC1.99□□□□□ -2.09
VRK1Q99986 MIR6715A-201ENST00000615929 79 ntBASIC1.99□□□□□ -2.09
VRK1Q99986 MIR424-201ENST00000362227 98 ntBASIC1.98□□□□□ -2.09
VRK1Q99986 Y_RNA.272-201ENST00000364696 102 ntBASIC1.98□□□□□ -2.09
VRK1Q99986 RNU6-1062P-201ENST00000383908 107 ntBASIC1.98□□□□□ -2.09
VRK1Q99986 RNU6-163P-201ENST00000384396 106 ntBASIC1.98□□□□□ -2.09
VRK1Q99986 MIR194-1-201ENST00000384892 85 ntBASIC1.98□□□□□ -2.09
VRK1Q99986 MIR660-201ENST00000385235 97 ntBASIC1.98□□□□□ -2.09
VRK1Q99986 Y_RNA.580-201ENST00000391004 95 ntBASIC1.98□□□□□ -2.09
VRK1Q99986 RNU2-70P-201ENST00000410718 179 ntBASIC1.98□□□□□ -2.09
VRK1Q99986 RN7SKP192-201ENST00000411291 327 ntBASIC1.98□□□□□ -2.09
VRK1Q99986 AL356320.1-201ENST00000429616 163 ntBASIC1.98□□□□□ -2.09
VRK1Q99986 SNRPGP14-201ENST00000435400 219 ntBASIC1.98□□□□□ -2.09
VRK1Q99986 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
VRK1Q99986 AC104435.1-201ENST00000483483 166 ntBASIC1.98□□□□□ -2.09
VRK1Q99986 RNU6-365P-201ENST00000517113 106 ntBASIC1.98□□□□□ -2.09
VRK1Q99986 AC006441.5-201ENST00000612680 209 ntBASIC1.98□□□□□ -2.09
VRK1Q99986 AP000553.5-201ENST00000641933 54 ntBASIC1.98□□□□□ -2.09
VRK1Q99986 AL442644.1-201ENST00000454390 3105 ntBASIC1.98□□□□□ -2.09
VRK1Q99986 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
VRK1Q99986 RNU6-1123P-201ENST00000362347 106 ntBASIC1.97□□□□□ -2.09
VRK1Q99986 MIR802-201ENST00000390235 94 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms