Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 SNORD109B-201ENST00000458961 67 ntBASIC1.43□□□□□ -2.18
LITAFQ99732 SNORD109A-201ENST00000459128 67 ntBASIC1.43□□□□□ -2.18
LITAFQ99732 snoU13.27-201ENST00000459278 104 ntBASIC1.43□□□□□ -2.18
LITAFQ99732 RN7SL274P-201ENST00000492268 272 ntBASIC1.43□□□□□ -2.18
LITAFQ99732 AC114811.1-201ENST00000507207 168 ntBASIC1.43□□□□□ -2.18
LITAFQ99732 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
LITAFQ99732 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.43□□□□□ -2.18
LITAFQ99732 Y_RNA.666-201ENST00000516187 112 ntBASIC1.43□□□□□ -2.18
LITAFQ99732 RNU6-504P-201ENST00000516568 104 ntBASIC1.43□□□□□ -2.18
LITAFQ99732 SNORA31.17-201ENST00000516953 127 ntBASIC1.43□□□□□ -2.18
LITAFQ99732 AC112693.2-201ENST00000556538 232 ntBASIC1.43□□□□□ -2.18
LITAFQ99732 MIR4709-201ENST00000577272 72 ntBASIC1.43□□□□□ -2.18
LITAFQ99732 MIR3910-1-201ENST00000580936 111 ntBASIC1.43□□□□□ -2.18
LITAFQ99732 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
LITAFQ99732 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.42□□□□□ -2.18
LITAFQ99732 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.42□□□□□ -2.18
LITAFQ99732 SNORA25.7-201ENST00000364375 127 ntBASIC1.42□□□□□ -2.18
LITAFQ99732 RNU6-1082P-201ENST00000364574 107 ntBASIC1.42□□□□□ -2.18
LITAFQ99732 Y_RNA.336-201ENST00000365307 109 ntBASIC1.42□□□□□ -2.18
LITAFQ99732 RNU6-1336P-201ENST00000383886 109 ntBASIC1.42□□□□□ -2.18
LITAFQ99732 SNORA6-201ENST00000384033 151 ntBASIC1.42□□□□□ -2.18
LITAFQ99732 SNORD61-201ENST00000384252 73 ntBASIC1.42□□□□□ -2.18
LITAFQ99732 RNU6-424P-201ENST00000384367 105 ntBASIC1.42□□□□□ -2.18
LITAFQ99732 RNU6-163P-201ENST00000384396 106 ntBASIC1.42□□□□□ -2.18
LITAFQ99732 Y_RNA.568-201ENST00000384742 113 ntBASIC1.42□□□□□ -2.18
LITAFQ99732 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
LITAFQ99732 U8.16-201ENST00000391279 133 ntBASIC1.42□□□□□ -2.18
LITAFQ99732 MIR513C-201ENST00000401352 84 ntBASIC1.42□□□□□ -2.18
LITAFQ99732 RNU6-588P-201ENST00000410281 105 ntBASIC1.42□□□□□ -2.18
LITAFQ99732 RNU2-40P-201ENST00000410833 196 ntBASIC1.42□□□□□ -2.18
LITAFQ99732 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.42□□□□□ -2.18
LITAFQ99732 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.42□□□□□ -2.18
LITAFQ99732 SNRPGP14-201ENST00000435400 219 ntBASIC1.42□□□□□ -2.18
LITAFQ99732 RNU7-34P-201ENST00000459394 64 ntBASIC1.42□□□□□ -2.18
LITAFQ99732 CYCTP-201ENST00000504253 315 ntBASIC1.42□□□□□ -2.18
LITAFQ99732 AC234781.5-201ENST00000508429 271 ntBASIC1.42□□□□□ -2.18
LITAFQ99732 RNU6-406P-201ENST00000516470 107 ntBASIC1.42□□□□□ -2.18
LITAFQ99732 RNA5SP168-201ENST00000516642 112 ntBASIC1.42□□□□□ -2.18
LITAFQ99732 RNU6-789P-201ENST00000517105 102 ntBASIC1.42□□□□□ -2.18
LITAFQ99732 AC007751.1-201ENST00000529260 376 ntBASIC1.42□□□□□ -2.18
LITAFQ99732 AC006441.5-201ENST00000612680 209 ntBASIC1.42□□□□□ -2.18
LITAFQ99732 MIR6810-201ENST00000622701 70 ntBASIC1.42□□□□□ -2.18
LITAFQ99732 AC027279.3-201ENST00000625055 122 ntBASIC1.42□□□□□ -2.18
LITAFQ99732 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
LITAFQ99732 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
LITAFQ99732 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.41□□□□□ -2.18
LITAFQ99732 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
LITAFQ99732 RNU6-888P-201ENST00000363010 101 ntBASIC1.41□□□□□ -2.18
LITAFQ99732 RNU6-268P-201ENST00000364174 107 ntBASIC1.41□□□□□ -2.18
LITAFQ99732 SNORD24-201ENST00000383884 75 ntBASIC1.41□□□□□ -2.18
LITAFQ99732 Y_RNA.497-201ENST00000384447 98 ntBASIC1.41□□□□□ -2.18
LITAFQ99732 RPL30P13-201ENST00000418873 348 ntBASIC1.41□□□□□ -2.18
LITAFQ99732 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.41□□□□□ -2.18
LITAFQ99732 SNRPGP13-201ENST00000442212 177 ntBASIC1.41□□□□□ -2.18
LITAFQ99732 HMGN2P32-201ENST00000444648 269 ntBASIC1.41□□□□□ -2.18
LITAFQ99732 TMSB4XP3-201ENST00000445144 114 ntBASIC1.41□□□□□ -2.18
LITAFQ99732 RNU7-197P-201ENST00000458836 62 ntBASIC1.41□□□□□ -2.18
LITAFQ99732 RNA5SP57-201ENST00000459463 123 ntBASIC1.41□□□□□ -2.18
LITAFQ99732 RN7SKP132-201ENST00000516001 208 ntBASIC1.41□□□□□ -2.18
LITAFQ99732 RNA5SP272-201ENST00000516095 111 ntBASIC1.41□□□□□ -2.18
LITAFQ99732 RNU6-693P-201ENST00000516134 107 ntBASIC1.41□□□□□ -2.18
LITAFQ99732 SNORA25.12-201ENST00000516202 82 ntBASIC1.41□□□□□ -2.18
LITAFQ99732 RNA5SP200-201ENST00000516360 103 ntBASIC1.41□□□□□ -2.18
LITAFQ99732 RNU6-426P-201ENST00000516464 97 ntBASIC1.41□□□□□ -2.18
LITAFQ99732 RNU6-1270P-201ENST00000517128 108 ntBASIC1.41□□□□□ -2.18
LITAFQ99732 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
LITAFQ99732 AC008739.3-201ENST00000603262 127 ntBASIC1.41□□□□□ -2.18
LITAFQ99732 AC021506.2-201ENST00000612354 169 ntBASIC1.41□□□□□ -2.18
LITAFQ99732 MIR8057-201ENST00000620957 69 ntBASIC1.41□□□□□ -2.18
LITAFQ99732 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.41□□□□□ -2.18
LITAFQ99732 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
LITAFQ99732 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
LITAFQ99732 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.4□□□□□ -2.18
LITAFQ99732 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.4□□□□□ -2.19
LITAFQ99732 RNY1P11-201ENST00000363759 113 ntBASIC1.4□□□□□ -2.19
LITAFQ99732 MIR7-3-201ENST00000384898 110 ntBASIC1.4□□□□□ -2.19
LITAFQ99732 MIR548A2-201ENST00000384956 97 ntBASIC1.4□□□□□ -2.19
LITAFQ99732 MIR221-201ENST00000385135 110 ntBASIC1.4□□□□□ -2.19
LITAFQ99732 RNU6-360P-201ENST00000390944 104 ntBASIC1.4□□□□□ -2.19
LITAFQ99732 RNU2-52P-201ENST00000410680 190 ntBASIC1.4□□□□□ -2.19
LITAFQ99732 BX510359.1-201ENST00000456973 237 ntBASIC1.4□□□□□ -2.19
LITAFQ99732 AC092991.1-201ENST00000477176 376 ntBASIC1.4□□□□□ -2.19
LITAFQ99732 AC099513.1-201ENST00000490423 301 ntBASIC1.4□□□□□ -2.19
LITAFQ99732 RNA5SP24-201ENST00000516478 95 ntBASIC1.4□□□□□ -2.19
LITAFQ99732 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.4□□□□□ -2.19
LITAFQ99732 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.4□□□□□ -2.19
LITAFQ99732 AL365205.2-201ENST00000594586 68 ntBASIC1.4□□□□□ -2.19
LITAFQ99732 AP001485.1-201ENST00000604799 199 ntBASIC1.4□□□□□ -2.19
LITAFQ99732 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.4□□□□□ -2.19
LITAFQ99732 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
LITAFQ99732 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
LITAFQ99732 RNU6-833P-201ENST00000363486 107 ntBASIC1.39□□□□□ -2.19
LITAFQ99732 Y_RNA.251-201ENST00000364551 99 ntBASIC1.39□□□□□ -2.19
LITAFQ99732 SNORA1-201ENST00000384107 130 ntBASIC1.39□□□□□ -2.19
LITAFQ99732 MIR518F-201ENST00000384973 87 ntBASIC1.39□□□□□ -2.19
LITAFQ99732 RNA5SP212-201ENST00000391223 107 ntBASIC1.39□□□□□ -2.19
LITAFQ99732 MIR891A-201ENST00000401237 79 ntBASIC1.39□□□□□ -2.19
LITAFQ99732 MIR548O-201ENST00000408583 114 ntBASIC1.39□□□□□ -2.19
LITAFQ99732 RNA5SP489-201ENST00000410986 109 ntBASIC1.39□□□□□ -2.19
LITAFQ99732 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms