Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.66□□□□□ -2.14
SIN3AQ96ST3 Y_RNA.14-201ENST00000362415 103 ntBASIC1.66□□□□□ -2.14
SIN3AQ96ST3 Y_RNA.117-201ENST00000363294 101 ntBASIC1.66□□□□□ -2.14
SIN3AQ96ST3 RNU6-740P-201ENST00000364734 105 ntBASIC1.66□□□□□ -2.14
SIN3AQ96ST3 Y_RNA.452-201ENST00000384202 108 ntBASIC1.66□□□□□ -2.14
SIN3AQ96ST3 RNU6-1289P-201ENST00000384431 106 ntBASIC1.66□□□□□ -2.14
SIN3AQ96ST3 Y_RNA.621-201ENST00000411065 96 ntBASIC1.66□□□□□ -2.14
SIN3AQ96ST3 BTF3P11-201ENST00000426582 477 ntBASIC1.66□□□□□ -2.14
SIN3AQ96ST3 RPL23AP54-201ENST00000495129 419 ntBASIC1.66□□□□□ -2.14
SIN3AQ96ST3 TRMT112P2-201ENST00000512910 132 ntBASIC1.66□□□□□ -2.14
SIN3AQ96ST3 RNU7-28P-201ENST00000516759 62 ntBASIC1.66□□□□□ -2.14
SIN3AQ96ST3 MIR4285-201ENST00000581001 85 ntBASIC1.66□□□□□ -2.14
SIN3AQ96ST3 AL162424.1-201ENST00000602325 221 ntBASIC1.66□□□□□ -2.14
SIN3AQ96ST3 SNORA28-201ENST00000606769 126 ntBASIC1.66□□□□□ -2.14
SIN3AQ96ST3 AL591926.4-201ENST00000616895 298 ntBASIC1.66□□□□□ -2.14
SIN3AQ96ST3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.66□□□□□ -2.14
SIN3AQ96ST3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.66□□□□□ -2.14
SIN3AQ96ST3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SIN3AQ96ST3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
SIN3AQ96ST3 MIRLET7C-201ENST00000362160 84 ntBASIC1.65□□□□□ -2.15
SIN3AQ96ST3 MIR424-201ENST00000362227 98 ntBASIC1.65□□□□□ -2.15
SIN3AQ96ST3 RNU6-899P-201ENST00000363947 107 ntBASIC1.65□□□□□ -2.15
SIN3AQ96ST3 RNU6-424P-201ENST00000384367 105 ntBASIC1.65□□□□□ -2.15
SIN3AQ96ST3 MIR30A-201ENST00000385092 71 ntBASIC1.65□□□□□ -2.15
SIN3AQ96ST3 RNA5SP482-201ENST00000391269 118 ntBASIC1.65□□□□□ -2.15
SIN3AQ96ST3 MIR1267-201ENST00000408723 78 ntBASIC1.65□□□□□ -2.15
SIN3AQ96ST3 SNORA36B-201ENST00000410438 131 ntBASIC1.65□□□□□ -2.15
SIN3AQ96ST3 AC015922.2-201ENST00000435593 184 ntBASIC1.65□□□□□ -2.15
SIN3AQ96ST3 RNU6-1132P-201ENST00000459214 107 ntBASIC1.65□□□□□ -2.15
SIN3AQ96ST3 AC108729.3-201ENST00000513484 108 ntBASIC1.65□□□□□ -2.15
SIN3AQ96ST3 MIR3149-201ENST00000584629 83 ntBASIC1.65□□□□□ -2.15
SIN3AQ96ST3 AC013791.1-201ENST00000616619 62 ntBASIC1.65□□□□□ -2.15
SIN3AQ96ST3 Y_RNA.253-201ENST00000364562 112 ntBASIC1.64□□□□□ -2.15
SIN3AQ96ST3 RNU6-392P-201ENST00000364926 101 ntBASIC1.64□□□□□ -2.15
SIN3AQ96ST3 Y_RNA.352-201ENST00000365439 102 ntBASIC1.64□□□□□ -2.15
SIN3AQ96ST3 AL603910.2-201ENST00000407268 136 ntBASIC1.64□□□□□ -2.15
SIN3AQ96ST3 CALM2P4-201ENST00000430810 426 ntBASIC1.64□□□□□ -2.15
SIN3AQ96ST3 AC008834.1-201ENST00000511612 175 ntBASIC1.64□□□□□ -2.15
SIN3AQ96ST3 MTND1P19-201ENST00000511780 315 ntBASIC1.64□□□□□ -2.15
SIN3AQ96ST3 MIR4643-201ENST00000577473 78 ntBASIC1.64□□□□□ -2.15
SIN3AQ96ST3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.64□□□□□ -2.15
SIN3AQ96ST3 AC073349.3-201ENST00000617616 186 ntBASIC1.64□□□□□ -2.15
SIN3AQ96ST3 Y_RNA.4-201ENST00000362333 112 ntBASIC1.63□□□□□ -2.15
SIN3AQ96ST3 Y_RNA.203-201ENST00000364106 102 ntBASIC1.63□□□□□ -2.15
SIN3AQ96ST3 RNU6-702P-201ENST00000364982 107 ntBASIC1.63□□□□□ -2.15
SIN3AQ96ST3 RNU6-211P-201ENST00000384047 107 ntBASIC1.63□□□□□ -2.15
SIN3AQ96ST3 U8.16-201ENST00000391279 133 ntBASIC1.63□□□□□ -2.15
SIN3AQ96ST3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.63□□□□□ -2.15
SIN3AQ96ST3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.63□□□□□ -2.15
SIN3AQ96ST3 SNORD2.1-201ENST00000458762 69 ntBASIC1.63□□□□□ -2.15
SIN3AQ96ST3 RNU6-1053P-201ENST00000515930 101 ntBASIC1.63□□□□□ -2.15
SIN3AQ96ST3 RNA5SP168-201ENST00000516642 112 ntBASIC1.63□□□□□ -2.15
SIN3AQ96ST3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.63□□□□□ -2.15
SIN3AQ96ST3 MIR5692C2-201ENST00000577959 77 ntBASIC1.63□□□□□ -2.15
SIN3AQ96ST3 AC062037.2-201ENST00000610137 73 ntBASIC1.63□□□□□ -2.15
SIN3AQ96ST3 AL513423.1-201ENST00000621695 132 ntBASIC1.63□□□□□ -2.15
SIN3AQ96ST3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
SIN3AQ96ST3 RNU6-1123P-201ENST00000362347 106 ntBASIC1.62□□□□□ -2.15
SIN3AQ96ST3 Y_RNA.82-201ENST00000363000 102 ntBASIC1.62□□□□□ -2.15
SIN3AQ96ST3 Y_RNA.92-201ENST00000363043 102 ntBASIC1.62□□□□□ -2.15
SIN3AQ96ST3 Y_RNA.235-201ENST00000364412 102 ntBASIC1.62□□□□□ -2.15
SIN3AQ96ST3 U8.5-201ENST00000364528 136 ntBASIC1.62□□□□□ -2.15
SIN3AQ96ST3 Y_RNA.306-201ENST00000365015 102 ntBASIC1.62□□□□□ -2.15
SIN3AQ96ST3 Y_RNA.312-201ENST00000365089 102 ntBASIC1.62□□□□□ -2.15
SIN3AQ96ST3 Y_RNA.322-201ENST00000365151 102 ntBASIC1.62□□□□□ -2.15
SIN3AQ96ST3 PGBD4P5-201ENST00000445958 426 ntBASIC1.62□□□□□ -2.15
SIN3AQ96ST3 Y_RNA.650-201ENST00000459002 102 ntBASIC1.62□□□□□ -2.15
SIN3AQ96ST3 RNU6-437P-201ENST00000459408 95 ntBASIC1.62□□□□□ -2.15
SIN3AQ96ST3 HMGN1P7-201ENST00000491722 313 ntBASIC1.62□□□□□ -2.15
SIN3AQ96ST3 Y_RNA.680-201ENST00000516441 93 ntBASIC1.62□□□□□ -2.15
SIN3AQ96ST3 Y_RNA.777-201ENST00000516982 102 ntBASIC1.62□□□□□ -2.15
SIN3AQ96ST3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.62□□□□□ -2.15
SIN3AQ96ST3 AC015688.6-201ENST00000577737 104 ntBASIC1.62□□□□□ -2.15
SIN3AQ96ST3 MIR4762-201ENST00000585261 75 ntBASIC1.62□□□□□ -2.15
SIN3AQ96ST3 Y_RNA.771-201ENST00000598668 102 ntBASIC1.62□□□□□ -2.15
SIN3AQ96ST3 Y_RNA.789-201ENST00000622480 102 ntBASIC1.62□□□□□ -2.15
SIN3AQ96ST3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SIN3AQ96ST3 MIR302D-201ENST00000362275 68 ntBASIC1.61□□□□□ -2.15
SIN3AQ96ST3 MIR126-201ENST00000362291 85 ntBASIC1.61□□□□□ -2.15
SIN3AQ96ST3 SNORD68-201ENST00000363214 84 ntBASIC1.61□□□□□ -2.15
SIN3AQ96ST3 RNU6-674P-201ENST00000363831 107 ntBASIC1.61□□□□□ -2.15
SIN3AQ96ST3 Y_RNA.796-201ENST00000364268 102 ntBASIC1.61□□□□□ -2.15
SIN3AQ96ST3 Y_RNA.238-201ENST00000364441 102 ntBASIC1.61□□□□□ -2.15
SIN3AQ96ST3 Y_RNA.799-201ENST00000364992 102 ntBASIC1.61□□□□□ -2.15
SIN3AQ96ST3 RNU6-969P-201ENST00000383900 105 ntBASIC1.61□□□□□ -2.15
SIN3AQ96ST3 MIR522-201ENST00000385071 87 ntBASIC1.61□□□□□ -2.15
SIN3AQ96ST3 MIR1278-201ENST00000408753 81 ntBASIC1.61□□□□□ -2.15
SIN3AQ96ST3 RPL39P38-201ENST00000467018 153 ntBASIC1.61□□□□□ -2.15
SIN3AQ96ST3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.61□□□□□ -2.15
SIN3AQ96ST3 RNU6-1116P-201ENST00000517269 99 ntBASIC1.61□□□□□ -2.15
SIN3AQ96ST3 MIR4282-201ENST00000583613 67 ntBASIC1.61□□□□□ -2.15
SIN3AQ96ST3 AC091895.1-201ENST00000624494 256 ntBASIC1.61□□□□□ -2.15
SIN3AQ96ST3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SIN3AQ96ST3 Y_RNA.122-201ENST00000363331 96 ntBASIC1.6□□□□□ -2.15
SIN3AQ96ST3 RNU6-1205P-201ENST00000363625 106 ntBASIC1.6□□□□□ -2.15
SIN3AQ96ST3 Y_RNA.277-201ENST00000364754 102 ntBASIC1.6□□□□□ -2.15
SIN3AQ96ST3 Y_RNA.350-201ENST00000365409 98 ntBASIC1.6□□□□□ -2.15
SIN3AQ96ST3 RNU6-338P-201ENST00000383888 105 ntBASIC1.6□□□□□ -2.15
SIN3AQ96ST3 RNU6-144P-201ENST00000383951 107 ntBASIC1.6□□□□□ -2.15
SIN3AQ96ST3 MIR660-201ENST00000385235 97 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms