Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 MIR342-201ENST00000362212 99 ntBASIC3.66□□□□□ -1.82
TRIM47Q96LD4 RNU6-1313P-201ENST00000362622 102 ntBASIC3.66□□□□□ -1.82
TRIM47Q96LD4 SNORA1.1-201ENST00000364671 133 ntBASIC3.66□□□□□ -1.82
TRIM47Q96LD4 Y_RNA.299-201ENST00000364973 94 ntBASIC3.66□□□□□ -1.82
TRIM47Q96LD4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM47Q96LD4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
TRIM47Q96LD4 AC022018.1-201ENST00000430685 241 ntBASIC3.66□□□□□ -1.82
TRIM47Q96LD4 CST9LP2-201ENST00000437612 320 ntBASIC3.66□□□□□ -1.82
TRIM47Q96LD4 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.66□□□□□ -1.82
TRIM47Q96LD4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM47Q96LD4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM47Q96LD4 uc_338.1-201ENST00000612113 180 ntBASIC3.66□□□□□ -1.82
TRIM47Q96LD4 AC090517.3-201ENST00000625170 141 ntBASIC3.66□□□□□ -1.82
TRIM47Q96LD4 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.66□□□□□ -1.82
TRIM47Q96LD4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM47Q96LD4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM47Q96LD4 AF117829.1-206ENST00000621883 3802 ntBASIC3.65□□□□□ -1.82
TRIM47Q96LD4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.65□□□□□ -1.82
TRIM47Q96LD4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
TRIM47Q96LD4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
TRIM47Q96LD4 SNORD56.3-201ENST00000363507 71 ntBASIC3.65□□□□□ -1.83
TRIM47Q96LD4 MIR519C-201ENST00000385053 87 ntBASIC3.65□□□□□ -1.83
TRIM47Q96LD4 MIR591-201ENST00000385290 95 ntBASIC3.65□□□□□ -1.83
TRIM47Q96LD4 AC140658.3-201ENST00000567603 271 ntBASIC3.65□□□□□ -1.83
TRIM47Q96LD4 RNU6-86P-201ENST00000606534 107 ntBASIC3.65□□□□□ -1.83
TRIM47Q96LD4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM47Q96LD4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM47Q96LD4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
TRIM47Q96LD4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM47Q96LD4 RN7SKP220-201ENST00000410611 288 ntBASIC3.64□□□□□ -1.83
TRIM47Q96LD4 EEF1A1P41-201ENST00000414667 207 ntBASIC3.64□□□□□ -1.83
TRIM47Q96LD4 AC090844.1-201ENST00000422019 156 ntBASIC3.64□□□□□ -1.83
TRIM47Q96LD4 FTH1P12-201ENST00000432137 551 ntBASIC3.64□□□□□ -1.83
TRIM47Q96LD4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.64□□□□□ -1.83
TRIM47Q96LD4 AC108729.3-201ENST00000513484 108 ntBASIC3.64□□□□□ -1.83
TRIM47Q96LD4 SCARNA20.6-201ENST00000517251 106 ntBASIC3.64□□□□□ -1.83
TRIM47Q96LD4 AC079598.5-201ENST00000547460 117 ntBASIC3.64□□□□□ -1.83
TRIM47Q96LD4 MIR4435-1-201ENST00000582552 80 ntBASIC3.64□□□□□ -1.83
TRIM47Q96LD4 AC073476.4-201ENST00000628409 72 ntBASIC3.64□□□□□ -1.83
TRIM47Q96LD4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
TRIM47Q96LD4 RNA5SP383-201ENST00000362934 120 ntBASIC3.63□□□□□ -1.83
TRIM47Q96LD4 RNU6-442P-201ENST00000383968 104 ntBASIC3.63□□□□□ -1.83
TRIM47Q96LD4 MIR522-201ENST00000385071 87 ntBASIC3.63□□□□□ -1.83
TRIM47Q96LD4 AL139132.1-201ENST00000431587 344 ntBASIC3.63□□□□□ -1.83
TRIM47Q96LD4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM47Q96LD4 RPS12P2-201ENST00000439728 269 ntBASIC3.63□□□□□ -1.83
TRIM47Q96LD4 RPL36AP48-201ENST00000485521 314 ntBASIC3.63□□□□□ -1.83
TRIM47Q96LD4 RNU2-34P-201ENST00000516534 121 ntBASIC3.63□□□□□ -1.83
TRIM47Q96LD4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM47Q96LD4 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.63□□□□□ -1.83
TRIM47Q96LD4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM47Q96LD4 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
TRIM47Q96LD4 SNORD115-37-201ENST00000363768 82 ntBASIC3.62□□□□□ -1.83
TRIM47Q96LD4 RNU6-268P-201ENST00000364174 107 ntBASIC3.62□□□□□ -1.83
TRIM47Q96LD4 SNORD77B-201ENST00000391112 67 ntBASIC3.62□□□□□ -1.83
TRIM47Q96LD4 RNA5SP229-201ENST00000410809 99 ntBASIC3.62□□□□□ -1.83
TRIM47Q96LD4 AL161932.1-201ENST00000437408 146 ntBASIC3.62□□□□□ -1.83
TRIM47Q96LD4 AL135938.1-201ENST00000443141 297 ntBASIC3.62□□□□□ -1.83
TRIM47Q96LD4 RN7SKP132-201ENST00000516001 208 ntBASIC3.62□□□□□ -1.83
TRIM47Q96LD4 RNU1-143P-201ENST00000516296 146 ntBASIC3.62□□□□□ -1.83
TRIM47Q96LD4 AC090115.4-201ENST00000609970 188 ntBASIC3.62□□□□□ -1.83
TRIM47Q96LD4 U1.23-201ENST00000610293 146 ntBASIC3.62□□□□□ -1.83
TRIM47Q96LD4 RNU1-68P-201ENST00000615382 146 ntBASIC3.62□□□□□ -1.83
TRIM47Q96LD4 U1.39-201ENST00000621562 146 ntBASIC3.62□□□□□ -1.83
TRIM47Q96LD4 MIR622-201ENST00000638396 96 ntBASIC3.62□□□□□ -1.83
TRIM47Q96LD4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.62□□□□□ -1.83
TRIM47Q96LD4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM47Q96LD4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM47Q96LD4 AC018630.2-201ENST00000534866 2403 ntBASIC3.61□□□□□ -1.83
TRIM47Q96LD4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
TRIM47Q96LD4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
TRIM47Q96LD4 Y_RNA.247-201ENST00000364500 92 ntBASIC3.61□□□□□ -1.83
TRIM47Q96LD4 RNU6-805P-201ENST00000365643 106 ntBASIC3.61□□□□□ -1.83
TRIM47Q96LD4 MTND4LP19-201ENST00000403051 166 ntBASIC3.61□□□□□ -1.83
TRIM47Q96LD4 MIR1253-201ENST00000408273 105 ntBASIC3.61□□□□□ -1.83
TRIM47Q96LD4 MIR1261-201ENST00000408659 82 ntBASIC3.61□□□□□ -1.83
TRIM47Q96LD4 RNU6-1186P-201ENST00000410429 97 ntBASIC3.61□□□□□ -1.83
TRIM47Q96LD4 RPL31P63-201ENST00000422565 375 ntBASIC3.61□□□□□ -1.83
TRIM47Q96LD4 snoU13.28-201ENST00000459235 104 ntBASIC3.61□□□□□ -1.83
TRIM47Q96LD4 AC021613.1-201ENST00000623880 111 ntBASIC3.61□□□□□ -1.83
TRIM47Q96LD4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM47Q96LD4 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM47Q96LD4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM47Q96LD4 RNU6-1094P-201ENST00000362416 104 ntBASIC3.6□□□□□ -1.83
TRIM47Q96LD4 RNU4-82P-201ENST00000362443 140 ntBASIC3.6□□□□□ -1.83
TRIM47Q96LD4 SNORD14E-201ENST00000364009 85 ntBASIC3.6□□□□□ -1.83
TRIM47Q96LD4 Y_RNA.267-201ENST00000364679 109 ntBASIC3.6□□□□□ -1.83
TRIM47Q96LD4 AL627390.1-201ENST00000396055 340 ntBASIC3.6□□□□□ -1.83
TRIM47Q96LD4 POLR2J4-204ENST00000418424 324 ntBASIC3.6□□□□□ -1.83
TRIM47Q96LD4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.6□□□□□ -1.83
TRIM47Q96LD4 RNA5SP217-201ENST00000515959 91 ntBASIC3.6□□□□□ -1.83
TRIM47Q96LD4 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.6□□□□□ -1.83
TRIM47Q96LD4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
TRIM47Q96LD4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM47Q96LD4 Y_RNA.57-201ENST00000362806 113 ntBASIC3.59□□□□□ -1.83
TRIM47Q96LD4 RNU6-1163P-201ENST00000364516 107 ntBASIC3.59□□□□□ -1.83
TRIM47Q96LD4 RNU6-129P-201ENST00000391022 107 ntBASIC3.59□□□□□ -1.83
TRIM47Q96LD4 RNA5SP184-201ENST00000411071 108 ntBASIC3.59□□□□□ -1.83
TRIM47Q96LD4 RPS15AP28-201ENST00000435088 386 ntBASIC3.59□□□□□ -1.83
TRIM47Q96LD4 SNRPGP14-201ENST00000435400 219 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms