Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 OR9P1P-201ENST00000496431 281 ntBASIC2.2□□□□□ -2.06
PDLIM2Q96JY6 RNU4-57P-201ENST00000515980 135 ntBASIC2.2□□□□□ -2.06
PDLIM2Q96JY6 RNU6-1291P-201ENST00000516591 104 ntBASIC2.2□□□□□ -2.06
PDLIM2Q96JY6 RNU7-149P-201ENST00000516739 59 ntBASIC2.2□□□□□ -2.06
PDLIM2Q96JY6 RNU7-128P-201ENST00000517247 62 ntBASIC2.2□□□□□ -2.06
PDLIM2Q96JY6 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.2□□□□□ -2.06
PDLIM2Q96JY6 IGKV3-31-201ENST00000523109 329 ntBASIC2.2□□□□□ -2.06
PDLIM2Q96JY6 AC245884.12-201ENST00000615364 59 ntBASIC2.2□□□□□ -2.06
PDLIM2Q96JY6 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.2□□□□□ -2.06
PDLIM2Q96JY6 Y_RNA.99-201ENST00000363138 105 ntBASIC2.19□□□□□ -2.06
PDLIM2Q96JY6 Y_RNA.267-201ENST00000364679 109 ntBASIC2.19□□□□□ -2.06
PDLIM2Q96JY6 RNA5SP323-201ENST00000391094 133 ntBASIC2.19□□□□□ -2.06
PDLIM2Q96JY6 SNORA26-201ENST00000391286 122 ntBASIC2.19□□□□□ -2.06
PDLIM2Q96JY6 RNA5SP508-201ENST00000411327 119 ntBASIC2.19□□□□□ -2.06
PDLIM2Q96JY6 YWHAEP4-201ENST00000505390 198 ntBASIC2.19□□□□□ -2.06
PDLIM2Q96JY6 RNU1-142P-201ENST00000516682 145 ntBASIC2.19□□□□□ -2.06
PDLIM2Q96JY6 NDUFA5P6-201ENST00000542110 379 ntBASIC2.19□□□□□ -2.06
PDLIM2Q96JY6 U7.2-201ENST00000607576 63 ntBASIC2.19□□□□□ -2.06
PDLIM2Q96JY6 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.19□□□□□ -2.06
PDLIM2Q96JY6 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
PDLIM2Q96JY6 RNU1-52P-201ENST00000384190 164 ntBASIC2.18□□□□□ -2.06
PDLIM2Q96JY6 RNU6-160P-201ENST00000384591 107 ntBASIC2.18□□□□□ -2.06
PDLIM2Q96JY6 MIR1262-201ENST00000408276 93 ntBASIC2.18□□□□□ -2.06
PDLIM2Q96JY6 RNU4-53P-201ENST00000410828 140 ntBASIC2.18□□□□□ -2.06
PDLIM2Q96JY6 ATP5J2P3-201ENST00000451550 258 ntBASIC2.18□□□□□ -2.06
PDLIM2Q96JY6 RNU1-131P-201ENST00000458943 161 ntBASIC2.18□□□□□ -2.06
PDLIM2Q96JY6 HMGN1P7-201ENST00000491722 313 ntBASIC2.18□□□□□ -2.06
PDLIM2Q96JY6 RNA5SP281-201ENST00000516504 135 ntBASIC2.18□□□□□ -2.06
PDLIM2Q96JY6 Y_RNA.686-201ENST00000516548 134 ntBASIC2.18□□□□□ -2.06
PDLIM2Q96JY6 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.18□□□□□ -2.06
PDLIM2Q96JY6 AC091178.2-201ENST00000584401 117 ntBASIC2.18□□□□□ -2.06
PDLIM2Q96JY6 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.18□□□□□ -2.06
PDLIM2Q96JY6 MIR6079-201ENST00000635807 62 ntBASIC2.18□□□□□ -2.06
PDLIM2Q96JY6 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PDLIM2Q96JY6 RNU6-1138P-201ENST00000365359 106 ntBASIC2.17□□□□□ -2.06
PDLIM2Q96JY6 Y_RNA.486-201ENST00000384398 107 ntBASIC2.17□□□□□ -2.06
PDLIM2Q96JY6 SNRPGP10-201ENST00000432323 225 ntBASIC2.17□□□□□ -2.06
PDLIM2Q96JY6 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.17□□□□□ -2.06
PDLIM2Q96JY6 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.17□□□□□ -2.06
PDLIM2Q96JY6 MIR4662B-201ENST00000579498 81 ntBASIC2.17□□□□□ -2.06
PDLIM2Q96JY6 MIR4298-201ENST00000584380 73 ntBASIC2.17□□□□□ -2.06
PDLIM2Q96JY6 U6.108-201ENST00000637764 58 ntBASIC2.17□□□□□ -2.06
PDLIM2Q96JY6 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PDLIM2Q96JY6 AC018630.2-201ENST00000534866 2403 ntBASIC2.17□□□□□ -2.06
PDLIM2Q96JY6 Y_RNA.81-201ENST00000362997 102 ntBASIC2.16□□□□□ -2.06
PDLIM2Q96JY6 SNORA33-201ENST00000363664 130 ntBASIC2.16□□□□□ -2.06
PDLIM2Q96JY6 Y_RNA.253-201ENST00000364562 112 ntBASIC2.16□□□□□ -2.06
PDLIM2Q96JY6 Y_RNA.273-201ENST00000364703 102 ntBASIC2.16□□□□□ -2.06
PDLIM2Q96JY6 Y_RNA.294-201ENST00000364916 102 ntBASIC2.16□□□□□ -2.06
PDLIM2Q96JY6 SNORA8-201ENST00000384574 139 ntBASIC2.16□□□□□ -2.06
PDLIM2Q96JY6 SNORA12.1-201ENST00000390873 148 ntBASIC2.16□□□□□ -2.06
PDLIM2Q96JY6 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.16□□□□□ -2.06
PDLIM2Q96JY6 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.16□□□□□ -2.06
PDLIM2Q96JY6 NDUFA4P2-201ENST00000489989 244 ntBASIC2.16□□□□□ -2.06
PDLIM2Q96JY6 RNU6-126P-201ENST00000516685 103 ntBASIC2.16□□□□□ -2.06
PDLIM2Q96JY6 RNU6-341P-201ENST00000516973 96 ntBASIC2.16□□□□□ -2.06
PDLIM2Q96JY6 RNU6-365P-201ENST00000517113 106 ntBASIC2.16□□□□□ -2.06
PDLIM2Q96JY6 Y_RNA.757-201ENST00000578934 114 ntBASIC2.16□□□□□ -2.06
PDLIM2Q96JY6 AC097639.2-201ENST00000603159 172 ntBASIC2.16□□□□□ -2.06
PDLIM2Q96JY6 AL353149.1-201ENST00000610667 244 ntBASIC2.16□□□□□ -2.06
PDLIM2Q96JY6 AL449363.1-201ENST00000617815 186 ntBASIC2.16□□□□□ -2.06
PDLIM2Q96JY6 U4atac.1-201ENST00000618345 95 ntBASIC2.16□□□□□ -2.06
PDLIM2Q96JY6 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
PDLIM2Q96JY6 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
PDLIM2Q96JY6 MIR126-201ENST00000362291 85 ntBASIC2.15□□□□□ -2.07
PDLIM2Q96JY6 U8.1-201ENST00000362843 134 ntBASIC2.15□□□□□ -2.07
PDLIM2Q96JY6 RNA5SP126-201ENST00000365092 109 ntBASIC2.15□□□□□ -2.07
PDLIM2Q96JY6 Y_RNA.353-201ENST00000365440 108 ntBASIC2.15□□□□□ -2.07
PDLIM2Q96JY6 SNORD20-201ENST00000384550 80 ntBASIC2.15□□□□□ -2.07
PDLIM2Q96JY6 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
PDLIM2Q96JY6 AL117342.1-201ENST00000404861 406 ntBASIC2.15□□□□□ -2.07
PDLIM2Q96JY6 MLLT10P1-201ENST00000418346 262 ntBASIC2.15□□□□□ -2.07
PDLIM2Q96JY6 RNU6-659P-201ENST00000516454 104 ntBASIC2.15□□□□□ -2.07
PDLIM2Q96JY6 AC131055.1-201ENST00000584626 316 ntBASIC2.15□□□□□ -2.07
PDLIM2Q96JY6 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.15□□□□□ -2.07
PDLIM2Q96JY6 AL590808.1-201ENST00000618696 141 ntBASIC2.15□□□□□ -2.07
PDLIM2Q96JY6 RNU6-862P-201ENST00000362804 105 ntBASIC2.14□□□□□ -2.07
PDLIM2Q96JY6 RNA5SP493-201ENST00000364115 91 ntBASIC2.14□□□□□ -2.07
PDLIM2Q96JY6 RNU1-91P-201ENST00000364746 163 ntBASIC2.14□□□□□ -2.07
PDLIM2Q96JY6 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.14□□□□□ -2.07
PDLIM2Q96JY6 RNU7-107P-201ENST00000459121 61 ntBASIC2.14□□□□□ -2.07
PDLIM2Q96JY6 MRPS17P9-201ENST00000511924 393 ntBASIC2.14□□□□□ -2.07
PDLIM2Q96JY6 SNORA18.4-201ENST00000516440 124 ntBASIC2.14□□□□□ -2.07
PDLIM2Q96JY6 Y_RNA.692-201ENST00000516627 105 ntBASIC2.14□□□□□ -2.07
PDLIM2Q96JY6 MIR3122-201ENST00000577243 73 ntBASIC2.14□□□□□ -2.07
PDLIM2Q96JY6 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
PDLIM2Q96JY6 RNU6-235P-201ENST00000362644 107 ntBASIC2.13□□□□□ -2.07
PDLIM2Q96JY6 SNORD115-3-201ENST00000363100 82 ntBASIC2.13□□□□□ -2.07
PDLIM2Q96JY6 SNORD18B-201ENST00000365659 72 ntBASIC2.13□□□□□ -2.07
PDLIM2Q96JY6 MIR515-2-201ENST00000384883 83 ntBASIC2.13□□□□□ -2.07
PDLIM2Q96JY6 MIR515-1-201ENST00000384884 83 ntBASIC2.13□□□□□ -2.07
PDLIM2Q96JY6 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.13□□□□□ -2.07
PDLIM2Q96JY6 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.13□□□□□ -2.07
PDLIM2Q96JY6 AL163195.1-201ENST00000496941 348 ntBASIC2.13□□□□□ -2.07
PDLIM2Q96JY6 RNU6-504P-201ENST00000516568 104 ntBASIC2.13□□□□□ -2.07
PDLIM2Q96JY6 AL358944.1-201ENST00000528537 144 ntBASIC2.13□□□□□ -2.07
PDLIM2Q96JY6 AC091544.4-201ENST00000555268 342 ntBASIC2.13□□□□□ -2.07
PDLIM2Q96JY6 SNRPGP19-201ENST00000603826 189 ntBASIC2.13□□□□□ -2.07
PDLIM2Q96JY6 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.13□□□□□ -2.07
PDLIM2Q96JY6 AL591926.4-201ENST00000616895 298 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 188.1 ms