Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.69□□□□□ -2.14
CCDC136Q96JN2 RNU6-570P-201ENST00000517051 105 ntBASIC1.69□□□□□ -2.14
CCDC136Q96JN2 AC090142.3-201ENST00000519012 385 ntBASIC1.69□□□□□ -2.14
CCDC136Q96JN2 AL512605.2-201ENST00000592972 256 ntBASIC1.69□□□□□ -2.14
CCDC136Q96JN2 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC136Q96JN2 AC068700.1-201ENST00000565862 3754 ntBASIC1.69□□□□□ -2.14
CCDC136Q96JN2 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.68□□□□□ -2.14
CCDC136Q96JN2 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.68□□□□□ -2.14
CCDC136Q96JN2 SNORA25.8-201ENST00000364831 128 ntBASIC1.68□□□□□ -2.14
CCDC136Q96JN2 Y_RNA.326-201ENST00000365176 113 ntBASIC1.68□□□□□ -2.14
CCDC136Q96JN2 RNU6-969P-201ENST00000383900 105 ntBASIC1.68□□□□□ -2.14
CCDC136Q96JN2 RNU6-514P-201ENST00000384208 107 ntBASIC1.68□□□□□ -2.14
CCDC136Q96JN2 Y_RNA.512-201ENST00000384518 102 ntBASIC1.68□□□□□ -2.14
CCDC136Q96JN2 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC136Q96JN2 AC015922.2-201ENST00000435593 184 ntBASIC1.68□□□□□ -2.14
CCDC136Q96JN2 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC136Q96JN2 AC048334.1-201ENST00000477975 159 ntBASIC1.68□□□□□ -2.14
CCDC136Q96JN2 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.68□□□□□ -2.14
CCDC136Q96JN2 SNORA31.2-201ENST00000516019 134 ntBASIC1.68□□□□□ -2.14
CCDC136Q96JN2 RNU6-1143P-201ENST00000516125 104 ntBASIC1.68□□□□□ -2.14
CCDC136Q96JN2 RNA5SP458-201ENST00000516188 119 ntBASIC1.68□□□□□ -2.14
CCDC136Q96JN2 SNORD111.1-201ENST00000516421 86 ntBASIC1.68□□□□□ -2.14
CCDC136Q96JN2 RPL23AP91-201ENST00000569211 455 ntBASIC1.68□□□□□ -2.14
CCDC136Q96JN2 AP000942.3-201ENST00000603702 160 ntBASIC1.68□□□□□ -2.14
CCDC136Q96JN2 RPS29P29-201ENST00000456396 171 ntBASIC1.67□□□□□ -2.14
CCDC136Q96JN2 Y_RNA.637-201ENST00000459424 114 ntBASIC1.67□□□□□ -2.14
CCDC136Q96JN2 Y_RNA.714-201ENST00000517065 90 ntBASIC1.67□□□□□ -2.14
CCDC136Q96JN2 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.67□□□□□ -2.14
CCDC136Q96JN2 HSPE1P19-201ENST00000603327 295 ntBASIC1.67□□□□□ -2.14
CCDC136Q96JN2 AC037487.3-201ENST00000606668 112 ntBASIC1.67□□□□□ -2.14
CCDC136Q96JN2 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.67□□□□□ -2.14
CCDC136Q96JN2 RNU6-1272P-201ENST00000362776 107 ntBASIC1.66□□□□□ -2.14
CCDC136Q96JN2 RNU6-899P-201ENST00000363947 107 ntBASIC1.66□□□□□ -2.14
CCDC136Q96JN2 RNU6-694P-201ENST00000364071 147 ntBASIC1.66□□□□□ -2.14
CCDC136Q96JN2 RNU6-326P-201ENST00000365480 107 ntBASIC1.66□□□□□ -2.14
CCDC136Q96JN2 SCARNA24.2-201ENST00000516968 130 ntBASIC1.66□□□□□ -2.14
CCDC136Q96JN2 AC090821.2-201ENST00000523552 176 ntBASIC1.66□□□□□ -2.14
CCDC136Q96JN2 AL357312.1-201ENST00000603879 298 ntBASIC1.66□□□□□ -2.14
CCDC136Q96JN2 AL096861.1-201ENST00000610899 123 ntBASIC1.66□□□□□ -2.14
CCDC136Q96JN2 BTF3P11-201ENST00000426582 477 ntBASIC1.65□□□□□ -2.15
CCDC136Q96JN2 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.65□□□□□ -2.15
CCDC136Q96JN2 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.65□□□□□ -2.15
CCDC136Q96JN2 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.65□□□□□ -2.15
CCDC136Q96JN2 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
CCDC136Q96JN2 RNU6-1205P-201ENST00000363625 106 ntBASIC1.64□□□□□ -2.15
CCDC136Q96JN2 RNU6-674P-201ENST00000363831 107 ntBASIC1.64□□□□□ -2.15
CCDC136Q96JN2 SNORD14E-201ENST00000364009 85 ntBASIC1.64□□□□□ -2.15
CCDC136Q96JN2 MIR136-201ENST00000385207 82 ntBASIC1.64□□□□□ -2.15
CCDC136Q96JN2 RNU6-383P-201ENST00000410864 94 ntBASIC1.64□□□□□ -2.15
CCDC136Q96JN2 HMGN2P32-201ENST00000444648 269 ntBASIC1.64□□□□□ -2.15
CCDC136Q96JN2 Y_RNA.638-201ENST00000459374 113 ntBASIC1.64□□□□□ -2.15
CCDC136Q96JN2 SNORA18.7-201ENST00000516910 131 ntBASIC1.64□□□□□ -2.15
CCDC136Q96JN2 AL022345.2-201ENST00000606307 135 ntBASIC1.64□□□□□ -2.15
CCDC136Q96JN2 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CCDC136Q96JN2 RNU6-1109P-201ENST00000391187 107 ntBASIC1.63□□□□□ -2.15
CCDC136Q96JN2 RNU6-1203P-201ENST00000410703 110 ntBASIC1.63□□□□□ -2.15
CCDC136Q96JN2 BTF3P4-201ENST00000418852 495 ntBASIC1.63□□□□□ -2.15
CCDC136Q96JN2 RPL39P39-201ENST00000455840 151 ntBASIC1.63□□□□□ -2.15
CCDC136Q96JN2 RNU1-123P-201ENST00000458950 160 ntBASIC1.63□□□□□ -2.15
CCDC136Q96JN2 RNU6-1338P-201ENST00000516328 91 ntBASIC1.63□□□□□ -2.15
CCDC136Q96JN2 DEFB108E-201ENST00000524692 240 ntBASIC1.63□□□□□ -2.15
CCDC136Q96JN2 MIR3192-201ENST00000584920 77 ntBASIC1.63□□□□□ -2.15
CCDC136Q96JN2 AC006504.6-201ENST00000590142 199 ntBASIC1.63□□□□□ -2.15
CCDC136Q96JN2 AL512598.1-201ENST00000610158 273 ntBASIC1.63□□□□□ -2.15
CCDC136Q96JN2 AC013791.1-201ENST00000616619 62 ntBASIC1.63□□□□□ -2.15
CCDC136Q96JN2 SNORA63-201ENST00000363450 132 ntBASIC1.62□□□□□ -2.15
CCDC136Q96JN2 MTND4LP30-201ENST00000454092 297 ntBASIC1.62□□□□□ -2.15
CCDC136Q96JN2 snoU13.25-201ENST00000458945 104 ntBASIC1.62□□□□□ -2.15
CCDC136Q96JN2 SNORD11-201ENST00000459124 84 ntBASIC1.62□□□□□ -2.15
CCDC136Q96JN2 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.62□□□□□ -2.15
CCDC136Q96JN2 RNU6-635P-201ENST00000516651 102 ntBASIC1.62□□□□□ -2.15
CCDC136Q96JN2 Y_RNA.720-201ENST00000517166 92 ntBASIC1.62□□□□□ -2.15
CCDC136Q96JN2 MIR2681-201ENST00000581814 105 ntBASIC1.62□□□□□ -2.15
CCDC136Q96JN2 ZNF209P-201ENST00000593450 2304 ntBASIC1.61□□□□□ -2.15
CCDC136Q96JN2 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.61□□□□□ -2.15
CCDC136Q96JN2 MIR378A-201ENST00000362177 66 ntBASIC1.61□□□□□ -2.15
CCDC136Q96JN2 Y_RNA.422-201ENST00000384054 114 ntBASIC1.61□□□□□ -2.15
CCDC136Q96JN2 RNU6-1160P-201ENST00000384546 104 ntBASIC1.61□□□□□ -2.15
CCDC136Q96JN2 MIR802-201ENST00000390235 94 ntBASIC1.61□□□□□ -2.15
CCDC136Q96JN2 RNU6-910P-201ENST00000390844 107 ntBASIC1.61□□□□□ -2.15
CCDC136Q96JN2 SNORD72-201ENST00000390994 80 ntBASIC1.61□□□□□ -2.15
CCDC136Q96JN2 AC245047.7-201ENST00000440265 293 ntBASIC1.61□□□□□ -2.15
CCDC136Q96JN2 RNU7-95P-201ENST00000459222 64 ntBASIC1.61□□□□□ -2.15
CCDC136Q96JN2 SERF1AP1-201ENST00000514575 187 ntBASIC1.61□□□□□ -2.15
CCDC136Q96JN2 DNAJC19P9-201ENST00000555084 351 ntBASIC1.61□□□□□ -2.15
CCDC136Q96JN2 AC008507.4-201ENST00000585464 127 ntBASIC1.61□□□□□ -2.15
CCDC136Q96JN2 AC136443.5-201ENST00000603741 370 ntBASIC1.61□□□□□ -2.15
CCDC136Q96JN2 AL008718.3-201ENST00000610217 321 ntBASIC1.61□□□□□ -2.15
CCDC136Q96JN2 RNU6-238P-201ENST00000363313 106 ntBASIC1.6□□□□□ -2.15
CCDC136Q96JN2 Y_RNA.217-201ENST00000364214 105 ntBASIC1.6□□□□□ -2.15
CCDC136Q96JN2 SNORA25-201ENST00000384384 134 ntBASIC1.6□□□□□ -2.15
CCDC136Q96JN2 MIR606-201ENST00000384851 96 ntBASIC1.6□□□□□ -2.15
CCDC136Q96JN2 MIR222-201ENST00000384992 110 ntBASIC1.6□□□□□ -2.15
CCDC136Q96JN2 RNU6-1054P-201ENST00000411293 104 ntBASIC1.6□□□□□ -2.15
CCDC136Q96JN2 AP1B1P2-201ENST00000416196 106 ntBASIC1.6□□□□□ -2.15
CCDC136Q96JN2 AL603825.1-201ENST00000438481 80 ntBASIC1.6□□□□□ -2.15
CCDC136Q96JN2 Y_RNA.641-201ENST00000459414 105 ntBASIC1.6□□□□□ -2.15
CCDC136Q96JN2 RN7SKP179-201ENST00000516126 217 ntBASIC1.6□□□□□ -2.15
CCDC136Q96JN2 SNORA27.4-201ENST00000516650 95 ntBASIC1.6□□□□□ -2.15
CCDC136Q96JN2 RNU1-92P-201ENST00000517017 135 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms