Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 RMST_10.1-201ENST00000616309 154 ntBASIC-1.05□□□□□ -2.58
SPG11Q96JI7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-1.06□□□□□ -2.58
SPG11Q96JI7 RNU6-354P-201ENST00000383862 107 ntBASIC-1.06□□□□□ -2.58
SPG11Q96JI7 RNU6-610P-201ENST00000384264 107 ntBASIC-1.06□□□□□ -2.58
SPG11Q96JI7 MTCO3P19-201ENST00000415864 321 ntBASIC-1.06□□□□□ -2.58
SPG11Q96JI7 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-1.06□□□□□ -2.58
SPG11Q96JI7 MTCO3P8-201ENST00000453691 755 ntBASIC-1.06□□□□□ -2.58
SPG11Q96JI7 RNY4P37-201ENST00000516225 96 ntBASIC-1.06□□□□□ -2.58
SPG11Q96JI7 AC174048.1-201ENST00000603389 144 ntBASIC-1.06□□□□□ -2.58
SPG11Q96JI7 AC073648.5-201ENST00000603502 305 ntBASIC-1.06□□□□□ -2.58
SPG11Q96JI7 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.06□□□□□ -2.58
SPG11Q96JI7 RNU6-564P-201ENST00000410983 104 ntBASIC-1.06□□□□□ -2.58
SPG11Q96JI7 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-1.06□□□□□ -2.58
SPG11Q96JI7 AL031667.1-201ENST00000440222 725 ntBASIC-1.06□□□□□ -2.58
SPG11Q96JI7 SNORD2-201ENST00000459163 69 ntBASIC-1.06□□□□□ -2.58
SPG11Q96JI7 AC011603.4-201ENST00000611325 277 ntBASIC-1.06□□□□□ -2.58
SPG11Q96JI7 RMST_3.1-201ENST00000611651 109 ntBASIC-1.06□□□□□ -2.58
SPG11Q96JI7 AC231657.1-201ENST00000624313 397 ntBASIC-1.06□□□□□ -2.58
SPG11Q96JI7 Z97988.1-201ENST00000637697 135 ntBASIC-1.06□□□□□ -2.58
SPG11Q96JI7 RNU6-1266P-201ENST00000362794 105 ntBASIC-1.07□□□□□ -2.58
SPG11Q96JI7 RNA5SP245-201ENST00000364239 121 ntBASIC-1.07□□□□□ -2.58
SPG11Q96JI7 Y_RNA.582-201ENST00000391023 95 ntBASIC-1.07□□□□□ -2.58
SPG11Q96JI7 AC114878.1-201ENST00000441166 358 ntBASIC-1.07□□□□□ -2.58
SPG11Q96JI7 RNU6-437P-201ENST00000459408 95 ntBASIC-1.07□□□□□ -2.58
SPG11Q96JI7 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.07□□□□□ -2.58
SPG11Q96JI7 AC069545.1-201ENST00000605671 358 ntBASIC-1.07□□□□□ -2.58
SPG11Q96JI7 RNU6-727P-201ENST00000363592 107 ntBASIC-1.07□□□□□ -2.58
SPG11Q96JI7 RNU6-708P-201ENST00000384217 107 ntBASIC-1.07□□□□□ -2.58
SPG11Q96JI7 AC026414.1-201ENST00000504046 698 ntBASIC-1.07□□□□□ -2.58
SPG11Q96JI7 AC018714.1-201ENST00000605028 208 ntBASIC-1.07□□□□□ -2.58
SPG11Q96JI7 AC100814.1-201ENST00000606963 623 ntBASIC-1.07□□□□□ -2.58
SPG11Q96JI7 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.08□□□□□ -2.58
SPG11Q96JI7 RNU1-141P-201ENST00000364623 158 ntBASIC-1.08□□□□□ -2.58
SPG11Q96JI7 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.08□□□□□ -2.58
SPG11Q96JI7 RNY3P9-201ENST00000384727 106 ntBASIC-1.08□□□□□ -2.58
SPG11Q96JI7 MIR522-201ENST00000385071 87 ntBASIC-1.08□□□□□ -2.58
SPG11Q96JI7 RNU2-29P-201ENST00000410423 189 ntBASIC-1.08□□□□□ -2.58
SPG11Q96JI7 EEF1A1P40-201ENST00000412883 573 ntBASIC-1.08□□□□□ -2.58
SPG11Q96JI7 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-1.08□□□□□ -2.58
SPG11Q96JI7 RNU6-760P-201ENST00000516078 97 ntBASIC-1.08□□□□□ -2.58
SPG11Q96JI7 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-1.08□□□□□ -2.58
SPG11Q96JI7 MTND5P40-201ENST00000559945 246 ntBASIC-1.08□□□□□ -2.58
SPG11Q96JI7 TUSC7.1-201ENST00000610969 165 ntBASIC-1.08□□□□□ -2.58
SPG11Q96JI7 AC023158.2-201ENST00000614876 543 ntBASIC-1.08□□□□□ -2.58
SPG11Q96JI7 MIR6818-201ENST00000621576 65 ntBASIC-1.08□□□□□ -2.58
SPG11Q96JI7 AC120349.2-201ENST00000625002 298 ntBASIC-1.08□□□□□ -2.58
SPG11Q96JI7 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.08□□□□□ -2.58
SPG11Q96JI7 RNU6-511P-201ENST00000363496 107 ntBASIC-1.08□□□□□ -2.58
SPG11Q96JI7 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.08□□□□□ -2.58
SPG11Q96JI7 AL606845.1-201ENST00000404881 255 ntBASIC-1.08□□□□□ -2.58
SPG11Q96JI7 RNU6-1001P-201ENST00000411265 100 ntBASIC-1.08□□□□□ -2.58
SPG11Q96JI7 AC002542.1-201ENST00000440683 193 ntBASIC-1.08□□□□□ -2.58
SPG11Q96JI7 RPL30P10-201ENST00000488148 337 ntBASIC-1.08□□□□□ -2.58
SPG11Q96JI7 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.08□□□□□ -2.58
SPG11Q96JI7 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.08□□□□□ -2.58
SPG11Q96JI7 MTND3P13-201ENST00000574391 343 ntBASIC-1.08□□□□□ -2.58
SPG11Q96JI7 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-1.08□□□□□ -2.58
SPG11Q96JI7 AP000907.4-201ENST00000604143 237 ntBASIC-1.08□□□□□ -2.58
SPG11Q96JI7 MIR8055-201ENST00000610739 97 ntBASIC-1.08□□□□□ -2.58
SPG11Q96JI7 U4.1-201ENST00000620349 87 ntBASIC-1.08□□□□□ -2.58
SPG11Q96JI7 RNU6-371P-201ENST00000364283 108 ntBASIC-1.09□□□□□ -2.58
SPG11Q96JI7 RNU2-9P-201ENST00000410194 145 ntBASIC-1.09□□□□□ -2.58
SPG11Q96JI7 RNU2-51P-201ENST00000410708 197 ntBASIC-1.09□□□□□ -2.58
SPG11Q96JI7 UBE2D3P4-201ENST00000441973 436 ntBASIC-1.09□□□□□ -2.58
SPG11Q96JI7 AL031274.1-201ENST00000450334 232 ntBASIC-1.09□□□□□ -2.58
SPG11Q96JI7 RNU7-67P-201ENST00000459003 62 ntBASIC-1.09□□□□□ -2.58
SPG11Q96JI7 MIR1322-201ENST00000638013 71 ntBASIC-1.09□□□□□ -2.58
SPG11Q96JI7 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.09□□□□□ -2.58
SPG11Q96JI7 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.09□□□□□ -2.58
SPG11Q96JI7 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.09□□□□□ -2.58
SPG11Q96JI7 MIR320C1-201ENST00000408566 88 ntBASIC-1.09□□□□□ -2.58
SPG11Q96JI7 MTCO2P11-201ENST00000431069 680 ntBASIC-1.09□□□□□ -2.58
SPG11Q96JI7 AL359672.1-201ENST00000442302 409 ntBASIC-1.09□□□□□ -2.58
SPG11Q96JI7 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.09□□□□□ -2.58
SPG11Q96JI7 RPS29P24-201ENST00000486345 171 ntBASIC-1.09□□□□□ -2.58
SPG11Q96JI7 AC108019.1-201ENST00000512540 175 ntBASIC-1.09□□□□□ -2.58
SPG11Q96JI7 SNORA25.13-201ENST00000516395 103 ntBASIC-1.09□□□□□ -2.58
SPG11Q96JI7 SNORA25.17-201ENST00000517184 124 ntBASIC-1.09□□□□□ -2.58
SPG11Q96JI7 RNU6-1261P-201ENST00000517194 104 ntBASIC-1.09□□□□□ -2.58
SPG11Q96JI7 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-1.09□□□□□ -2.58
SPG11Q96JI7 AC069503.3-201ENST00000618674 145 ntBASIC-1.09□□□□□ -2.58
SPG11Q96JI7 AC137590.2-201ENST00000619709 240 ntBASIC-1.09□□□□□ -2.58
SPG11Q96JI7 MIR664B-201ENST00000626756 61 ntBASIC-1.09□□□□□ -2.58
SPG11Q96JI7 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.1□□□□□ -2.59
SPG11Q96JI7 RNU6-336P-201ENST00000364891 107 ntBASIC-1.1□□□□□ -2.59
SPG11Q96JI7 RNU6-407P-201ENST00000365280 104 ntBASIC-1.1□□□□□ -2.59
SPG11Q96JI7 RNU6-449P-201ENST00000383914 107 ntBASIC-1.1□□□□□ -2.59
SPG11Q96JI7 AC022028.1-201ENST00000412054 408 ntBASIC-1.1□□□□□ -2.59
SPG11Q96JI7 AC108059.2-201ENST00000434626 151 ntBASIC-1.1□□□□□ -2.59
SPG11Q96JI7 AC098614.3-201ENST00000438957 440 ntBASIC-1.1□□□□□ -2.59
SPG11Q96JI7 HMGN2P32-201ENST00000444648 269 ntBASIC-1.1□□□□□ -2.59
SPG11Q96JI7 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-1.1□□□□□ -2.59
SPG11Q96JI7 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-1.1□□□□□ -2.59
SPG11Q96JI7 SNORA43.4-201ENST00000629559 138 ntBASIC-1.1□□□□□ -2.59
SPG11Q96JI7 AC013437.2-201ENST00000639587 677 ntBASIC-1.1□□□□□ -2.59
SPG11Q96JI7 RNU6-777P-201ENST00000364265 104 ntBASIC-1.1□□□□□ -2.59
SPG11Q96JI7 SNORD114-17-201ENST00000364699 75 ntBASIC-1.1□□□□□ -2.59
SPG11Q96JI7 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.1□□□□□ -2.59
SPG11Q96JI7 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-1.1□□□□□ -2.59
SPG11Q96JI7 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.1□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms