Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 MIR6844-201ENST00000637122 62 ntBASIC2.09□□□□□ -2.07
VCPIP1Q96JH7 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
VCPIP1Q96JH7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
VCPIP1Q96JH7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
VCPIP1Q96JH7 Y_RNA.4-201ENST00000362333 112 ntBASIC2.08□□□□□ -2.08
VCPIP1Q96JH7 RNU6-117P-201ENST00000365415 107 ntBASIC2.08□□□□□ -2.08
VCPIP1Q96JH7 RNU6-768P-201ENST00000384683 107 ntBASIC2.08□□□□□ -2.08
VCPIP1Q96JH7 AC010154.1-201ENST00000425857 269 ntBASIC2.08□□□□□ -2.08
VCPIP1Q96JH7 MTND4LP9-201ENST00000427694 174 ntBASIC2.08□□□□□ -2.08
VCPIP1Q96JH7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.08□□□□□ -2.08
VCPIP1Q96JH7 SNRPGP8-201ENST00000454064 226 ntBASIC2.08□□□□□ -2.08
VCPIP1Q96JH7 MIR3935-201ENST00000583472 104 ntBASIC2.08□□□□□ -2.08
VCPIP1Q96JH7 MIR4438-201ENST00000585271 93 ntBASIC2.08□□□□□ -2.08
VCPIP1Q96JH7 AL096840.1-201ENST00000603287 93 ntBASIC2.08□□□□□ -2.08
VCPIP1Q96JH7 AP000942.3-201ENST00000603702 160 ntBASIC2.08□□□□□ -2.08
VCPIP1Q96JH7 AL627230.6-201ENST00000611129 280 ntBASIC2.08□□□□□ -2.08
VCPIP1Q96JH7 Y_RNA.783-201ENST00000613546 102 ntBASIC2.08□□□□□ -2.08
VCPIP1Q96JH7 CENPCP1-201ENST00000533085 2578 ntBASIC2.07□□□□□ -2.08
VCPIP1Q96JH7 RNU6-1290P-201ENST00000362957 109 ntBASIC2.07□□□□□ -2.08
VCPIP1Q96JH7 RNU6-674P-201ENST00000363831 107 ntBASIC2.07□□□□□ -2.08
VCPIP1Q96JH7 SNORD45.3-201ENST00000363836 72 ntBASIC2.07□□□□□ -2.08
VCPIP1Q96JH7 RNA5SP493-201ENST00000364115 91 ntBASIC2.07□□□□□ -2.08
VCPIP1Q96JH7 RNY3P5-201ENST00000384127 102 ntBASIC2.07□□□□□ -2.08
VCPIP1Q96JH7 RNU4-52P-201ENST00000384209 138 ntBASIC2.07□□□□□ -2.08
VCPIP1Q96JH7 SNORA22C-201ENST00000384614 134 ntBASIC2.07□□□□□ -2.08
VCPIP1Q96JH7 MIR518A2-201ENST00000384966 87 ntBASIC2.07□□□□□ -2.08
VCPIP1Q96JH7 MIR597-201ENST00000384968 97 ntBASIC2.07□□□□□ -2.08
VCPIP1Q96JH7 U8.13-201ENST00000390842 128 ntBASIC2.07□□□□□ -2.08
VCPIP1Q96JH7 SNORA26.9-201ENST00000391322 122 ntBASIC2.07□□□□□ -2.08
VCPIP1Q96JH7 AL512604.1-201ENST00000404812 257 ntBASIC2.07□□□□□ -2.08
VCPIP1Q96JH7 MIR1253-201ENST00000408273 105 ntBASIC2.07□□□□□ -2.08
VCPIP1Q96JH7 MIR1283-2-201ENST00000408621 87 ntBASIC2.07□□□□□ -2.08
VCPIP1Q96JH7 CYCSP49-201ENST00000420810 319 ntBASIC2.07□□□□□ -2.08
VCPIP1Q96JH7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.07□□□□□ -2.08
VCPIP1Q96JH7 RPS27P1-201ENST00000450552 247 ntBASIC2.07□□□□□ -2.08
VCPIP1Q96JH7 RNU6-479P-201ENST00000516348 105 ntBASIC2.07□□□□□ -2.08
VCPIP1Q96JH7 RNU6-971P-201ENST00000516920 106 ntBASIC2.07□□□□□ -2.08
VCPIP1Q96JH7 RNU7-172P-201ENST00000517125 64 ntBASIC2.07□□□□□ -2.08
VCPIP1Q96JH7 AL929325.1-201ENST00000603096 117 ntBASIC2.07□□□□□ -2.08
VCPIP1Q96JH7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
VCPIP1Q96JH7 RNU1-22P-201ENST00000363334 158 ntBASIC2.06□□□□□ -2.08
VCPIP1Q96JH7 Y_RNA.420-201ENST00000384043 110 ntBASIC2.06□□□□□ -2.08
VCPIP1Q96JH7 SNORA72-201ENST00000384339 132 ntBASIC2.06□□□□□ -2.08
VCPIP1Q96JH7 RNU6-160P-201ENST00000384591 107 ntBASIC2.06□□□□□ -2.08
VCPIP1Q96JH7 Y_RNA.542-201ENST00000384641 111 ntBASIC2.06□□□□□ -2.08
VCPIP1Q96JH7 RNU6-1168P-201ENST00000390831 104 ntBASIC2.06□□□□□ -2.08
VCPIP1Q96JH7 RNA5SP496-201ENST00000391240 109 ntBASIC2.06□□□□□ -2.08
VCPIP1Q96JH7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.06□□□□□ -2.08
VCPIP1Q96JH7 SNORA79-201ENST00000408376 140 ntBASIC2.06□□□□□ -2.08
VCPIP1Q96JH7 RNU6-588P-201ENST00000410281 105 ntBASIC2.06□□□□□ -2.08
VCPIP1Q96JH7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.06□□□□□ -2.08
VCPIP1Q96JH7 AL357134.1-201ENST00000445848 426 ntBASIC2.06□□□□□ -2.08
VCPIP1Q96JH7 RNU6-1211P-201ENST00000459179 105 ntBASIC2.06□□□□□ -2.08
VCPIP1Q96JH7 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.06□□□□□ -2.08
VCPIP1Q96JH7 MIR3169-201ENST00000578032 83 ntBASIC2.06□□□□□ -2.08
VCPIP1Q96JH7 MIR4448-201ENST00000584360 86 ntBASIC2.06□□□□□ -2.08
VCPIP1Q96JH7 AL049861.1-201ENST00000603130 150 ntBASIC2.06□□□□□ -2.08
VCPIP1Q96JH7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.06□□□□□ -2.08
VCPIP1Q96JH7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.06□□□□□ -2.08
VCPIP1Q96JH7 AC245060.5-201ENST00000610778 3293 ntBASIC2.06□□□□□ -2.08
VCPIP1Q96JH7 SNORA16B-201ENST00000364674 135 ntBASIC2.05□□□□□ -2.08
VCPIP1Q96JH7 SUMO2P12-201ENST00000405924 140 ntBASIC2.05□□□□□ -2.08
VCPIP1Q96JH7 RNU4-43P-201ENST00000410628 137 ntBASIC2.05□□□□□ -2.08
VCPIP1Q96JH7 RN7SKP101-201ENST00000411376 320 ntBASIC2.05□□□□□ -2.08
VCPIP1Q96JH7 AC060773.1-201ENST00000421698 310 ntBASIC2.05□□□□□ -2.08
VCPIP1Q96JH7 HMGN2P34-201ENST00000437647 269 ntBASIC2.05□□□□□ -2.08
VCPIP1Q96JH7 RPS4XP11-201ENST00000446897 772 ntBASIC2.05□□□□□ -2.08
VCPIP1Q96JH7 AC245102.2-201ENST00000448956 180 ntBASIC2.05□□□□□ -2.08
VCPIP1Q96JH7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.05□□□□□ -2.08
VCPIP1Q96JH7 MRPS17P9-201ENST00000511924 393 ntBASIC2.05□□□□□ -2.08
VCPIP1Q96JH7 AC097462.1-201ENST00000514125 324 ntBASIC2.05□□□□□ -2.08
VCPIP1Q96JH7 RNU6-856P-201ENST00000516959 98 ntBASIC2.05□□□□□ -2.08
VCPIP1Q96JH7 AC022513.1-201ENST00000624512 117 ntBASIC2.05□□□□□ -2.08
VCPIP1Q96JH7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
VCPIP1Q96JH7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
VCPIP1Q96JH7 RNU1-58P-201ENST00000362413 163 ntBASIC2.04□□□□□ -2.08
VCPIP1Q96JH7 RNU1-17P-201ENST00000363022 152 ntBASIC2.04□□□□□ -2.08
VCPIP1Q96JH7 RNU6-23P-201ENST00000363283 107 ntBASIC2.04□□□□□ -2.08
VCPIP1Q96JH7 Y_RNA.261-201ENST00000364631 102 ntBASIC2.04□□□□□ -2.08
VCPIP1Q96JH7 Y_RNA.393-201ENST00000383936 102 ntBASIC2.04□□□□□ -2.08
VCPIP1Q96JH7 RNU6-1080P-201ENST00000383982 107 ntBASIC2.04□□□□□ -2.08
VCPIP1Q96JH7 MIR29C-201ENST00000385231 88 ntBASIC2.04□□□□□ -2.08
VCPIP1Q96JH7 RNU6-460P-201ENST00000391158 108 ntBASIC2.04□□□□□ -2.08
VCPIP1Q96JH7 RNU6-735P-201ENST00000410612 107 ntBASIC2.04□□□□□ -2.08
VCPIP1Q96JH7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
VCPIP1Q96JH7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
VCPIP1Q96JH7 RNU7-197P-201ENST00000458836 62 ntBASIC2.04□□□□□ -2.08
VCPIP1Q96JH7 AC092991.1-201ENST00000477176 376 ntBASIC2.04□□□□□ -2.08
VCPIP1Q96JH7 RPL23AP91-201ENST00000569211 455 ntBASIC2.04□□□□□ -2.08
VCPIP1Q96JH7 MIR3646-201ENST00000578301 84 ntBASIC2.04□□□□□ -2.08
VCPIP1Q96JH7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.04□□□□□ -2.08
VCPIP1Q96JH7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.04□□□□□ -2.08
VCPIP1Q96JH7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.04□□□□□ -2.08
VCPIP1Q96JH7 AL359851.1-201ENST00000569460 4997 ntBASIC2.04□□□□□ -2.08
VCPIP1Q96JH7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
VCPIP1Q96JH7 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
VCPIP1Q96JH7 Y_RNA.203-201ENST00000364106 102 ntBASIC2.03□□□□□ -2.08
VCPIP1Q96JH7 MIR583-201ENST00000384846 75 ntBASIC2.03□□□□□ -2.08
VCPIP1Q96JH7 RNU11-3P-201ENST00000391111 133 ntBASIC2.03□□□□□ -2.08
VCPIP1Q96JH7 RNU6-1186P-201ENST00000410429 97 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 191.1 ms