Protein–RNA interactions for Protein: Q96HJ3

CCDC34, Coiled-coil domain-containing protein 34, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC34Q96HJ3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CCDC34Q96HJ3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.32□□□□□ -2.2
CCDC34Q96HJ3 SNORA25.1-201ENST00000362326 128 ntBASIC1.32□□□□□ -2.2
CCDC34Q96HJ3 Y_RNA.16-201ENST00000362421 102 ntBASIC1.32□□□□□ -2.2
CCDC34Q96HJ3 SNORA7.1-201ENST00000363750 139 ntBASIC1.32□□□□□ -2.2
CCDC34Q96HJ3 RNU6-770P-201ENST00000363929 105 ntBASIC1.32□□□□□ -2.2
CCDC34Q96HJ3 SNORD50B-201ENST00000364995 70 ntBASIC1.32□□□□□ -2.2
CCDC34Q96HJ3 RNU6-1323P-201ENST00000384025 107 ntBASIC1.32□□□□□ -2.2
CCDC34Q96HJ3 RNU6-514P-201ENST00000384208 107 ntBASIC1.32□□□□□ -2.2
CCDC34Q96HJ3 SNORA36B-201ENST00000410438 131 ntBASIC1.32□□□□□ -2.2
CCDC34Q96HJ3 AP1B1P2-201ENST00000416196 106 ntBASIC1.32□□□□□ -2.2
CCDC34Q96HJ3 RPS29P28-201ENST00000446439 141 ntBASIC1.32□□□□□ -2.2
CCDC34Q96HJ3 OR2A41P-201ENST00000473586 105 ntBASIC1.32□□□□□ -2.2
CCDC34Q96HJ3 AC005840.1-201ENST00000498412 377 ntBASIC1.32□□□□□ -2.2
CCDC34Q96HJ3 RNU6-764P-201ENST00000516396 105 ntBASIC1.32□□□□□ -2.2
CCDC34Q96HJ3 RNU7-116P-201ENST00000516940 62 ntBASIC1.32□□□□□ -2.2
CCDC34Q96HJ3 RNU6-570P-201ENST00000517051 105 ntBASIC1.32□□□□□ -2.2
CCDC34Q96HJ3 DNAJC19P9-201ENST00000555084 351 ntBASIC1.32□□□□□ -2.2
CCDC34Q96HJ3 AC127455.1-201ENST00000565496 145 ntBASIC1.32□□□□□ -2.2
CCDC34Q96HJ3 AL512605.2-201ENST00000592972 256 ntBASIC1.32□□□□□ -2.2
CCDC34Q96HJ3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.32□□□□□ -2.2
CCDC34Q96HJ3 AC022140.2-201ENST00000623500 188 ntBASIC1.32□□□□□ -2.2
CCDC34Q96HJ3 RNU6-833P-201ENST00000363486 107 ntBASIC1.31□□□□□ -2.2
CCDC34Q96HJ3 RNU6-801P-201ENST00000364087 105 ntBASIC1.31□□□□□ -2.2
CCDC34Q96HJ3 snoU2-30.1-201ENST00000365012 70 ntBASIC1.31□□□□□ -2.2
CCDC34Q96HJ3 SNORA25.9-201ENST00000365087 128 ntBASIC1.31□□□□□ -2.2
CCDC34Q96HJ3 SNORA33.2-201ENST00000365413 134 ntBASIC1.31□□□□□ -2.2
CCDC34Q96HJ3 Y_RNA.380-201ENST00000365663 111 ntBASIC1.31□□□□□ -2.2
CCDC34Q96HJ3 RNU6-639P-201ENST00000384074 107 ntBASIC1.31□□□□□ -2.2
CCDC34Q96HJ3 RNU6-662P-201ENST00000384253 104 ntBASIC1.31□□□□□ -2.2
CCDC34Q96HJ3 Y_RNA.541-201ENST00000384640 113 ntBASIC1.31□□□□□ -2.2
CCDC34Q96HJ3 RNU6-763P-201ENST00000390865 106 ntBASIC1.31□□□□□ -2.2
CCDC34Q96HJ3 MTCO1P5-201ENST00000433573 344 ntBASIC1.31□□□□□ -2.2
CCDC34Q96HJ3 RPL39P39-201ENST00000455840 151 ntBASIC1.31□□□□□ -2.2
CCDC34Q96HJ3 MTATP8P1-201ENST00000467115 207 ntBASIC1.31□□□□□ -2.2
CCDC34Q96HJ3 RPS23P4-201ENST00000487908 423 ntBASIC1.31□□□□□ -2.2
CCDC34Q96HJ3 SNORA18.7-201ENST00000516910 131 ntBASIC1.31□□□□□ -2.2
CCDC34Q96HJ3 RPL23AP91-201ENST00000569211 455 ntBASIC1.31□□□□□ -2.2
CCDC34Q96HJ3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.31□□□□□ -2.2
CCDC34Q96HJ3 AC005357.1-201ENST00000588399 301 ntBASIC1.31□□□□□ -2.2
CCDC34Q96HJ3 AP003357.1-201ENST00000604497 148 ntBASIC1.31□□□□□ -2.2
CCDC34Q96HJ3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CCDC34Q96HJ3 Y_RNA.118-201ENST00000363300 101 ntBASIC1.3□□□□□ -2.2
CCDC34Q96HJ3 Y_RNA.153-201ENST00000363615 91 ntBASIC1.3□□□□□ -2.2
CCDC34Q96HJ3 RNU6-1209P-201ENST00000363655 107 ntBASIC1.3□□□□□ -2.2
CCDC34Q96HJ3 SNORA72.4-201ENST00000384174 132 ntBASIC1.3□□□□□ -2.2
CCDC34Q96HJ3 Y_RNA.512-201ENST00000384518 102 ntBASIC1.3□□□□□ -2.2
CCDC34Q96HJ3 MIR499A-201ENST00000384903 122 ntBASIC1.3□□□□□ -2.2
CCDC34Q96HJ3 MIR452-201ENST00000385020 85 ntBASIC1.3□□□□□ -2.2
CCDC34Q96HJ3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.3□□□□□ -2.2
CCDC34Q96HJ3 RNA5SP404-201ENST00000517118 132 ntBASIC1.3□□□□□ -2.2
CCDC34Q96HJ3 AP003733.2-201ENST00000529409 171 ntBASIC1.3□□□□□ -2.2
CCDC34Q96HJ3 AP003072.1-201ENST00000531740 145 ntBASIC1.3□□□□□ -2.2
CCDC34Q96HJ3 HSPE1P19-201ENST00000603327 295 ntBASIC1.3□□□□□ -2.2
CCDC34Q96HJ3 AC037487.3-201ENST00000606668 112 ntBASIC1.3□□□□□ -2.2
CCDC34Q96HJ3 AL353770.2-201ENST00000620024 78 ntBASIC1.3□□□□□ -2.2
CCDC34Q96HJ3 snoU2_19.2-201ENST00000363024 80 ntBASIC1.29□□□□□ -2.2
CCDC34Q96HJ3 RNU6-238P-201ENST00000363313 106 ntBASIC1.29□□□□□ -2.2
CCDC34Q96HJ3 SNORD14E-201ENST00000364009 85 ntBASIC1.29□□□□□ -2.2
CCDC34Q96HJ3 RNU6-290P-201ENST00000365212 101 ntBASIC1.29□□□□□ -2.2
CCDC34Q96HJ3 AC117470.1-201ENST00000381974 330 ntBASIC1.29□□□□□ -2.2
CCDC34Q96HJ3 RNU6-910P-201ENST00000390844 107 ntBASIC1.29□□□□□ -2.2
CCDC34Q96HJ3 BTF3P11-201ENST00000426582 477 ntBASIC1.29□□□□□ -2.2
CCDC34Q96HJ3 AC005534.2-201ENST00000431047 433 ntBASIC1.29□□□□□ -2.2
CCDC34Q96HJ3 U8.19-201ENST00000459095 133 ntBASIC1.29□□□□□ -2.2
CCDC34Q96HJ3 RNU6-437P-201ENST00000459408 95 ntBASIC1.29□□□□□ -2.2
CCDC34Q96HJ3 SNORD116-28-201ENST00000516123 91 ntBASIC1.29□□□□□ -2.2
CCDC34Q96HJ3 Y_RNA.714-201ENST00000517065 90 ntBASIC1.29□□□□□ -2.2
CCDC34Q96HJ3 MIR4295-201ENST00000585286 85 ntBASIC1.29□□□□□ -2.2
CCDC34Q96HJ3 AL355297.3-201ENST00000604082 446 ntBASIC1.29□□□□□ -2.2
CCDC34Q96HJ3 MIR8070-201ENST00000616510 88 ntBASIC1.29□□□□□ -2.2
CCDC34Q96HJ3 MIR7111-201ENST00000619751 72 ntBASIC1.29□□□□□ -2.2
CCDC34Q96HJ3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.29□□□□□ -2.2
CCDC34Q96HJ3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.28□□□□□ -2.2
CCDC34Q96HJ3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.28□□□□□ -2.2
CCDC34Q96HJ3 Y_RNA.152-201ENST00000363578 100 ntBASIC1.28□□□□□ -2.2
CCDC34Q96HJ3 Y_RNA.222-201ENST00000364264 102 ntBASIC1.28□□□□□ -2.2
CCDC34Q96HJ3 U8.5-201ENST00000364528 136 ntBASIC1.28□□□□□ -2.2
CCDC34Q96HJ3 Y_RNA.293-201ENST00000364908 93 ntBASIC1.28□□□□□ -2.2
CCDC34Q96HJ3 MIR653-201ENST00000385279 96 ntBASIC1.28□□□□□ -2.2
CCDC34Q96HJ3 Y_RNA.581-201ENST00000391017 97 ntBASIC1.28□□□□□ -2.2
CCDC34Q96HJ3 RNU6-1248P-201ENST00000391096 64 ntBASIC1.28□□□□□ -2.2
CCDC34Q96HJ3 SNORA53-201ENST00000391141 249 ntBASIC1.28□□□□□ -2.2
CCDC34Q96HJ3 RNU6-383P-201ENST00000410864 94 ntBASIC1.28□□□□□ -2.2
CCDC34Q96HJ3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.28□□□□□ -2.2
CCDC34Q96HJ3 AC090142.3-201ENST00000519012 385 ntBASIC1.28□□□□□ -2.2
CCDC34Q96HJ3 AC136628.3-201ENST00000521868 290 ntBASIC1.28□□□□□ -2.2
CCDC34Q96HJ3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC34Q96HJ3 AC027279.3-201ENST00000625055 122 ntBASIC1.28□□□□□ -2.2
CCDC34Q96HJ3 AL391987.6-201ENST00000305671 199 ntBASIC1.27□□□□□ -2.21
CCDC34Q96HJ3 Y_RNA.11-201ENST00000362375 109 ntBASIC1.27□□□□□ -2.21
CCDC34Q96HJ3 RNU1-124P-201ENST00000363861 145 ntBASIC1.27□□□□□ -2.21
CCDC34Q96HJ3 Y_RNA.336-201ENST00000365307 109 ntBASIC1.27□□□□□ -2.21
CCDC34Q96HJ3 Y_RNA.508-201ENST00000384502 114 ntBASIC1.27□□□□□ -2.21
CCDC34Q96HJ3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.27□□□□□ -2.21
CCDC34Q96HJ3 RNU2-31P-201ENST00000516954 155 ntBASIC1.27□□□□□ -2.21
CCDC34Q96HJ3 AL022345.2-201ENST00000606307 135 ntBASIC1.27□□□□□ -2.21
CCDC34Q96HJ3 BX284668.6-201ENST00000606899 438 ntBASIC1.27□□□□□ -2.21
CCDC34Q96HJ3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.27□□□□□ -2.21
CCDC34Q96HJ3 AL096861.1-201ENST00000610899 123 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms