Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RNU6-717P-201ENST00000459076 104 ntBASIC2.42□□□□□ -2.02
ERCC4Q92889 OR9P1P-201ENST00000496431 281 ntBASIC2.42□□□□□ -2.02
ERCC4Q92889 RNU7-149P-201ENST00000516739 59 ntBASIC2.42□□□□□ -2.02
ERCC4Q92889 MIR4762-201ENST00000585261 75 ntBASIC2.42□□□□□ -2.02
ERCC4Q92889 AC078899.2-201ENST00000595282 212 ntBASIC2.42□□□□□ -2.02
ERCC4Q92889 AL591926.4-201ENST00000616895 298 ntBASIC2.42□□□□□ -2.02
ERCC4Q92889 AC064859.1-201ENST00000624741 174 ntBASIC2.42□□□□□ -2.02
ERCC4Q92889 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
ERCC4Q92889 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.42□□□□□ -2.02
ERCC4Q92889 Y_RNA.634-201ENST00000364811 113 ntBASIC2.41□□□□□ -2.02
ERCC4Q92889 MIR597-201ENST00000384968 97 ntBASIC2.41□□□□□ -2.02
ERCC4Q92889 MIR17-201ENST00000385012 84 ntBASIC2.41□□□□□ -2.02
ERCC4Q92889 Y_RNA.621-201ENST00000411065 96 ntBASIC2.41□□□□□ -2.02
ERCC4Q92889 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.41□□□□□ -2.02
ERCC4Q92889 FTH1P12-201ENST00000432137 551 ntBASIC2.41□□□□□ -2.02
ERCC4Q92889 SNRPGP10-201ENST00000432323 225 ntBASIC2.41□□□□□ -2.02
ERCC4Q92889 RNU6-426P-201ENST00000516464 97 ntBASIC2.41□□□□□ -2.02
ERCC4Q92889 RNU6-126P-201ENST00000516685 103 ntBASIC2.41□□□□□ -2.02
ERCC4Q92889 AC084364.2-201ENST00000546924 395 ntBASIC2.41□□□□□ -2.02
ERCC4Q92889 MIR4662B-201ENST00000579498 81 ntBASIC2.41□□□□□ -2.02
ERCC4Q92889 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
ERCC4Q92889 U8.5-201ENST00000364528 136 ntBASIC2.4□□□□□ -2.03
ERCC4Q92889 Y_RNA.497-201ENST00000384447 98 ntBASIC2.4□□□□□ -2.03
ERCC4Q92889 MIR522-201ENST00000385071 87 ntBASIC2.4□□□□□ -2.03
ERCC4Q92889 SNORA79-201ENST00000408376 140 ntBASIC2.4□□□□□ -2.03
ERCC4Q92889 HMGN2P3-201ENST00000433603 273 ntBASIC2.4□□□□□ -2.03
ERCC4Q92889 HMGN2P5-201ENST00000436882 273 ntBASIC2.4□□□□□ -2.03
ERCC4Q92889 AL021397.1-201ENST00000451806 248 ntBASIC2.4□□□□□ -2.03
ERCC4Q92889 AL049830.1-201ENST00000468034 425 ntBASIC2.4□□□□□ -2.03
ERCC4Q92889 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.4□□□□□ -2.03
ERCC4Q92889 MIR3945-201ENST00000581853 98 ntBASIC2.4□□□□□ -2.03
ERCC4Q92889 AC008507.4-201ENST00000585464 127 ntBASIC2.4□□□□□ -2.03
ERCC4Q92889 AC069114.2-201ENST00000604699 304 ntBASIC2.4□□□□□ -2.03
ERCC4Q92889 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.4□□□□□ -2.03
ERCC4Q92889 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
ERCC4Q92889 Y_RNA.91-201ENST00000363042 107 ntBASIC2.39□□□□□ -2.03
ERCC4Q92889 RNU11-3P-201ENST00000391111 133 ntBASIC2.39□□□□□ -2.03
ERCC4Q92889 RNU2-19P-201ENST00000517288 84 ntBASIC2.39□□□□□ -2.03
ERCC4Q92889 AC112693.2-201ENST00000556538 232 ntBASIC2.39□□□□□ -2.03
ERCC4Q92889 AC087685.1-201ENST00000587507 141 ntBASIC2.39□□□□□ -2.03
ERCC4Q92889 AC120024.3-201ENST00000603167 156 ntBASIC2.39□□□□□ -2.03
ERCC4Q92889 Pinc.1-201ENST00000616452 154 ntBASIC2.39□□□□□ -2.03
ERCC4Q92889 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
ERCC4Q92889 Y_RNA.66-201ENST00000362862 102 ntBASIC2.38□□□□□ -2.03
ERCC4Q92889 SNORA63D-201ENST00000364359 132 ntBASIC2.38□□□□□ -2.03
ERCC4Q92889 Y_RNA.251-201ENST00000364551 99 ntBASIC2.38□□□□□ -2.03
ERCC4Q92889 Y_RNA.486-201ENST00000384398 107 ntBASIC2.38□□□□□ -2.03
ERCC4Q92889 SNORA48.1-201ENST00000390879 135 ntBASIC2.38□□□□□ -2.03
ERCC4Q92889 RNA5SP109-201ENST00000391010 116 ntBASIC2.38□□□□□ -2.03
ERCC4Q92889 Y_RNA.586-201ENST00000391146 98 ntBASIC2.38□□□□□ -2.03
ERCC4Q92889 SNORA75.5-201ENST00000391291 81 ntBASIC2.38□□□□□ -2.03
ERCC4Q92889 AL023284.1-201ENST00000403956 276 ntBASIC2.38□□□□□ -2.03
ERCC4Q92889 AC245047.3-201ENST00000429428 127 ntBASIC2.38□□□□□ -2.03
ERCC4Q92889 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.38□□□□□ -2.03
ERCC4Q92889 MRPS17P9-201ENST00000511924 393 ntBASIC2.38□□□□□ -2.03
ERCC4Q92889 SNRPGP19-201ENST00000603826 189 ntBASIC2.38□□□□□ -2.03
ERCC4Q92889 MIR6715A-201ENST00000615929 79 ntBASIC2.38□□□□□ -2.03
ERCC4Q92889 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.38□□□□□ -2.03
ERCC4Q92889 MIR6844-201ENST00000637122 62 ntBASIC2.38□□□□□ -2.03
ERCC4Q92889 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
ERCC4Q92889 MIR126-201ENST00000362291 85 ntBASIC2.37□□□□□ -2.03
ERCC4Q92889 Y_RNA.521-201ENST00000384560 114 ntBASIC2.37□□□□□ -2.03
ERCC4Q92889 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
ERCC4Q92889 SNORA12.1-201ENST00000390873 148 ntBASIC2.37□□□□□ -2.03
ERCC4Q92889 SNORA26-201ENST00000391286 122 ntBASIC2.37□□□□□ -2.03
ERCC4Q92889 SNORA3.2-201ENST00000408221 125 ntBASIC2.37□□□□□ -2.03
ERCC4Q92889 RNU6-257P-201ENST00000410238 98 ntBASIC2.37□□□□□ -2.03
ERCC4Q92889 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
ERCC4Q92889 RPL30P13-201ENST00000418873 348 ntBASIC2.37□□□□□ -2.03
ERCC4Q92889 AL356320.1-201ENST00000429616 163 ntBASIC2.37□□□□□ -2.03
ERCC4Q92889 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.37□□□□□ -2.03
ERCC4Q92889 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.37□□□□□ -2.03
ERCC4Q92889 RNA5SP233-201ENST00000459153 113 ntBASIC2.37□□□□□ -2.03
ERCC4Q92889 AC025033.1-201ENST00000463883 194 ntBASIC2.37□□□□□ -2.03
ERCC4Q92889 AC055731.1-201ENST00000474387 401 ntBASIC2.37□□□□□ -2.03
ERCC4Q92889 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.37□□□□□ -2.03
ERCC4Q92889 AC092991.1-201ENST00000477176 376 ntBASIC2.37□□□□□ -2.03
ERCC4Q92889 SUB1P4-201ENST00000566062 339 ntBASIC2.37□□□□□ -2.03
ERCC4Q92889 MIR5094-201ENST00000578766 85 ntBASIC2.37□□□□□ -2.03
ERCC4Q92889 uc_338.20-201ENST00000621563 178 ntBASIC2.37□□□□□ -2.03
ERCC4Q92889 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
ERCC4Q92889 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
ERCC4Q92889 RNY1P11-201ENST00000363759 113 ntBASIC2.36□□□□□ -2.03
ERCC4Q92889 RNA5SP138-201ENST00000365098 114 ntBASIC2.36□□□□□ -2.03
ERCC4Q92889 SNORA70B-201ENST00000384210 135 ntBASIC2.36□□□□□ -2.03
ERCC4Q92889 SNORD72-201ENST00000390994 80 ntBASIC2.36□□□□□ -2.03
ERCC4Q92889 RNA5SP482-201ENST00000391269 118 ntBASIC2.36□□□□□ -2.03
ERCC4Q92889 RNA5SP425-201ENST00000410336 112 ntBASIC2.36□□□□□ -2.03
ERCC4Q92889 RNU2-70P-201ENST00000410718 179 ntBASIC2.36□□□□□ -2.03
ERCC4Q92889 Z98742.3-201ENST00000418637 326 ntBASIC2.36□□□□□ -2.03
ERCC4Q92889 AC069257.2-201ENST00000441819 155 ntBASIC2.36□□□□□ -2.03
ERCC4Q92889 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.36□□□□□ -2.03
ERCC4Q92889 SNORA25.12-201ENST00000516202 82 ntBASIC2.36□□□□□ -2.03
ERCC4Q92889 RNVU1-2-201ENST00000516326 135 ntBASIC2.36□□□□□ -2.03
ERCC4Q92889 SNORA31.10-201ENST00000516482 106 ntBASIC2.36□□□□□ -2.03
ERCC4Q92889 SCARNA16.3-201ENST00000516595 184 ntBASIC2.36□□□□□ -2.03
ERCC4Q92889 RNU7-28P-201ENST00000516759 62 ntBASIC2.36□□□□□ -2.03
ERCC4Q92889 RNU2-56P-201ENST00000516826 190 ntBASIC2.36□□□□□ -2.03
ERCC4Q92889 MIR8054-201ENST00000620877 86 ntBASIC2.36□□□□□ -2.03
ERCC4Q92889 AC010332.2-201ENST00000613083 1904 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms