Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 RNU6-12P-201ENST00000384604 107 ntBASIC2.75□□□□□ -1.97
DDX1Q92499 RNU6-41P-201ENST00000384741 107 ntBASIC2.75□□□□□ -1.97
DDX1Q92499 MIR548A1-201ENST00000385041 97 ntBASIC2.75□□□□□ -1.97
DDX1Q92499 HMGN2P35-201ENST00000412164 270 ntBASIC2.75□□□□□ -1.97
DDX1Q92499 HMGN2P34-201ENST00000437647 269 ntBASIC2.75□□□□□ -1.97
DDX1Q92499 AL353689.1-201ENST00000438895 199 ntBASIC2.75□□□□□ -1.97
DDX1Q92499 RN7SL636P-201ENST00000497504 294 ntBASIC2.75□□□□□ -1.97
DDX1Q92499 RNU6-1041P-201ENST00000516254 102 ntBASIC2.75□□□□□ -1.97
DDX1Q92499 RNA5SP148-201ENST00000516527 94 ntBASIC2.75□□□□□ -1.97
DDX1Q92499 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.75□□□□□ -1.97
DDX1Q92499 RPL23AP91-201ENST00000569211 455 ntBASIC2.75□□□□□ -1.97
DDX1Q92499 AC025166.1-201ENST00000612411 163 ntBASIC2.75□□□□□ -1.97
DDX1Q92499 AL121890.5-201ENST00000620848 304 ntBASIC2.75□□□□□ -1.97
DDX1Q92499 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
DDX1Q92499 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
DDX1Q92499 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
DDX1Q92499 VTRNA1-1-201ENST00000363120 99 ntBASIC2.74□□□□□ -1.97
DDX1Q92499 RNU6-23P-201ENST00000363283 107 ntBASIC2.74□□□□□ -1.97
DDX1Q92499 Y_RNA.116-201ENST00000363292 103 ntBASIC2.74□□□□□ -1.97
DDX1Q92499 RNU6-1209P-201ENST00000363655 107 ntBASIC2.74□□□□□ -1.97
DDX1Q92499 RNA5SP493-201ENST00000364115 91 ntBASIC2.74□□□□□ -1.97
DDX1Q92499 Y_RNA.281-201ENST00000364774 94 ntBASIC2.74□□□□□ -1.97
DDX1Q92499 SNORD18B-201ENST00000365659 72 ntBASIC2.74□□□□□ -1.97
DDX1Q92499 RNU2-70P-201ENST00000410718 179 ntBASIC2.74□□□□□ -1.97
DDX1Q92499 RPS4XP11-201ENST00000446897 772 ntBASIC2.74□□□□□ -1.97
DDX1Q92499 RPS29P24-201ENST00000486345 171 ntBASIC2.74□□□□□ -1.97
DDX1Q92499 RNA5SP236-201ENST00000516169 116 ntBASIC2.74□□□□□ -1.97
DDX1Q92499 MIR2681-201ENST00000581814 105 ntBASIC2.74□□□□□ -1.97
DDX1Q92499 AL022345.2-201ENST00000606307 135 ntBASIC2.74□□□□□ -1.97
DDX1Q92499 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.74□□□□□ -1.97
DDX1Q92499 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
DDX1Q92499 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
DDX1Q92499 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
DDX1Q92499 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
DDX1Q92499 RNU1-22P-201ENST00000363334 158 ntBASIC2.73□□□□□ -1.97
DDX1Q92499 Y_RNA.486-201ENST00000384398 107 ntBASIC2.73□□□□□ -1.97
DDX1Q92499 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
DDX1Q92499 MIR1302-4-201ENST00000408701 150 ntBASIC2.73□□□□□ -1.97
DDX1Q92499 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.73□□□□□ -1.97
DDX1Q92499 AL031737.1-201ENST00000450125 223 ntBASIC2.73□□□□□ -1.97
DDX1Q92499 ATP5J2P3-201ENST00000451550 258 ntBASIC2.73□□□□□ -1.97
DDX1Q92499 RNA5SP458-201ENST00000516188 119 ntBASIC2.73□□□□□ -1.97
DDX1Q92499 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.73□□□□□ -1.97
DDX1Q92499 uc_338.28-201ENST00000612082 187 ntBASIC2.73□□□□□ -1.97
DDX1Q92499 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.73□□□□□ -1.97
DDX1Q92499 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.73□□□□□ -1.97
DDX1Q92499 RNU1-58P-201ENST00000362413 163 ntBASIC2.72□□□□□ -1.97
DDX1Q92499 snoU2-30.2-201ENST00000362805 70 ntBASIC2.72□□□□□ -1.97
DDX1Q92499 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.72□□□□□ -1.97
DDX1Q92499 RNU7-149P-201ENST00000516739 59 ntBASIC2.72□□□□□ -1.97
DDX1Q92499 MIR4438-201ENST00000585271 93 ntBASIC2.72□□□□□ -1.97
DDX1Q92499 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.72□□□□□ -1.97
DDX1Q92499 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.72□□□□□ -1.97
DDX1Q92499 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.72□□□□□ -1.97
DDX1Q92499 AC131280.1-202ENST00000624067 4211 ntBASIC2.72□□□□□ -1.97
DDX1Q92499 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
DDX1Q92499 RNU6-905P-201ENST00000384434 107 ntBASIC2.71□□□□□ -1.98
DDX1Q92499 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
DDX1Q92499 RNU6-554P-201ENST00000410466 106 ntBASIC2.71□□□□□ -1.98
DDX1Q92499 RNA5SP127-201ENST00000411051 133 ntBASIC2.71□□□□□ -1.98
DDX1Q92499 RNA5SP270-201ENST00000411361 118 ntBASIC2.71□□□□□ -1.98
DDX1Q92499 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.71□□□□□ -1.98
DDX1Q92499 AL356320.1-201ENST00000429616 163 ntBASIC2.71□□□□□ -1.98
DDX1Q92499 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.71□□□□□ -1.98
DDX1Q92499 AL021397.1-201ENST00000451806 248 ntBASIC2.71□□□□□ -1.98
DDX1Q92499 MIR5092-201ENST00000583139 88 ntBASIC2.71□□□□□ -1.98
DDX1Q92499 Pinc.1-201ENST00000616452 154 ntBASIC2.71□□□□□ -1.98
DDX1Q92499 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
DDX1Q92499 RNU4-13P-201ENST00000364019 141 ntBASIC2.7□□□□□ -1.98
DDX1Q92499 SNORA25.6-201ENST00000364121 118 ntBASIC2.7□□□□□ -1.98
DDX1Q92499 Y_RNA.348-201ENST00000365403 103 ntBASIC2.7□□□□□ -1.98
DDX1Q92499 RNU11-3P-201ENST00000391111 133 ntBASIC2.7□□□□□ -1.98
DDX1Q92499 SNORA26-201ENST00000391286 122 ntBASIC2.7□□□□□ -1.98
DDX1Q92499 RNU4-53P-201ENST00000410828 140 ntBASIC2.7□□□□□ -1.98
DDX1Q92499 Z98742.3-201ENST00000418637 326 ntBASIC2.7□□□□□ -1.98
DDX1Q92499 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.7□□□□□ -1.98
DDX1Q92499 AC018634.1-201ENST00000437554 401 ntBASIC2.7□□□□□ -1.98
DDX1Q92499 OR9P1P-201ENST00000496431 281 ntBASIC2.7□□□□□ -1.98
DDX1Q92499 Y_RNA.677-201ENST00000516401 85 ntBASIC2.7□□□□□ -1.98
DDX1Q92499 MIR3169-201ENST00000578032 83 ntBASIC2.7□□□□□ -1.98
DDX1Q92499 MIR4662B-201ENST00000579498 81 ntBASIC2.7□□□□□ -1.98
DDX1Q92499 AL353149.1-201ENST00000610667 244 ntBASIC2.7□□□□□ -1.98
DDX1Q92499 U6.73-201ENST00000619194 103 ntBASIC2.7□□□□□ -1.98
DDX1Q92499 MIR338-201ENST00000636369 67 ntBASIC2.7□□□□□ -1.98
DDX1Q92499 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
DDX1Q92499 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
DDX1Q92499 RNU6-640P-201ENST00000363693 105 ntBASIC2.69□□□□□ -1.98
DDX1Q92499 RNU6-1292P-201ENST00000383856 107 ntBASIC2.69□□□□□ -1.98
DDX1Q92499 SNORA1-201ENST00000384107 130 ntBASIC2.69□□□□□ -1.98
DDX1Q92499 RNU11-5P-201ENST00000391216 129 ntBASIC2.69□□□□□ -1.98
DDX1Q92499 AF228730.3-201ENST00000436691 102 ntBASIC2.69□□□□□ -1.98
DDX1Q92499 NDUFA4P2-201ENST00000489989 244 ntBASIC2.69□□□□□ -1.98
DDX1Q92499 AC097462.1-201ENST00000514125 324 ntBASIC2.69□□□□□ -1.98
DDX1Q92499 SNORA18.4-201ENST00000516440 124 ntBASIC2.69□□□□□ -1.98
DDX1Q92499 RNU6-126P-201ENST00000516685 103 ntBASIC2.69□□□□□ -1.98
DDX1Q92499 RNU7-172P-201ENST00000517125 64 ntBASIC2.69□□□□□ -1.98
DDX1Q92499 AC007229.1-201ENST00000590455 412 ntBASIC2.69□□□□□ -1.98
DDX1Q92499 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.69□□□□□ -1.98
DDX1Q92499 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
DDX1Q92499 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms