Protein–RNA interactions for Protein: Q8WXE1

ATRIP, ATR-interacting protein, humanhuman

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIPQ8WXE1 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
ATRIPQ8WXE1 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
ATRIPQ8WXE1 RNU6-103P-201ENST00000363686 107 ntBASIC2.19□□□□□ -2.06
ATRIPQ8WXE1 RNU4-41P-201ENST00000364426 143 ntBASIC2.19□□□□□ -2.06
ATRIPQ8WXE1 RNU6-1130P-201ENST00000365434 107 ntBASIC2.19□□□□□ -2.06
ATRIPQ8WXE1 Y_RNA.506-201ENST00000384494 102 ntBASIC2.19□□□□□ -2.06
ATRIPQ8WXE1 Y_RNA.508-201ENST00000384502 114 ntBASIC2.19□□□□□ -2.06
ATRIPQ8WXE1 RNU6-125P-201ENST00000384505 107 ntBASIC2.19□□□□□ -2.06
ATRIPQ8WXE1 AL606845.1-201ENST00000404881 255 ntBASIC2.19□□□□□ -2.06
ATRIPQ8WXE1 CST2P1-201ENST00000425770 87 ntBASIC2.19□□□□□ -2.06
ATRIPQ8WXE1 AC109810.1-201ENST00000534066 224 ntBASIC2.19□□□□□ -2.06
ATRIPQ8WXE1 AC005786.1-201ENST00000588553 154 ntBASIC2.19□□□□□ -2.06
ATRIPQ8WXE1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.19□□□□□ -2.06
ATRIPQ8WXE1 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.19□□□□□ -2.06
ATRIPQ8WXE1 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
ATRIPQ8WXE1 Y_RNA.23-201ENST00000362496 106 ntBASIC2.18□□□□□ -2.06
ATRIPQ8WXE1 Y_RNA.272-201ENST00000364696 102 ntBASIC2.18□□□□□ -2.06
ATRIPQ8WXE1 RNU6-1080P-201ENST00000383982 107 ntBASIC2.18□□□□□ -2.06
ATRIPQ8WXE1 Y_RNA.441-201ENST00000384123 112 ntBASIC2.18□□□□□ -2.06
ATRIPQ8WXE1 SNORA48.3-201ENST00000391081 134 ntBASIC2.18□□□□□ -2.06
ATRIPQ8WXE1 RNA5SP323-201ENST00000391094 133 ntBASIC2.18□□□□□ -2.06
ATRIPQ8WXE1 RNU11-3P-201ENST00000391111 133 ntBASIC2.18□□□□□ -2.06
ATRIPQ8WXE1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.18□□□□□ -2.06
ATRIPQ8WXE1 RNU4-61P-201ENST00000411243 107 ntBASIC2.18□□□□□ -2.06
ATRIPQ8WXE1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
ATRIPQ8WXE1 CYCSP49-201ENST00000420810 319 ntBASIC2.18□□□□□ -2.06
ATRIPQ8WXE1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.18□□□□□ -2.06
ATRIPQ8WXE1 AL445646.1-201ENST00000431784 216 ntBASIC2.18□□□□□ -2.06
ATRIPQ8WXE1 RNU6-346P-201ENST00000516288 111 ntBASIC2.18□□□□□ -2.06
ATRIPQ8WXE1 MIR3935-201ENST00000583472 104 ntBASIC2.18□□□□□ -2.06
ATRIPQ8WXE1 AC091178.2-201ENST00000584401 117 ntBASIC2.18□□□□□ -2.06
ATRIPQ8WXE1 AL391903.3-201ENST00000612158 163 ntBASIC2.18□□□□□ -2.06
ATRIPQ8WXE1 MIR6845-201ENST00000613182 61 ntBASIC2.18□□□□□ -2.06
ATRIPQ8WXE1 Y_RNA.783-201ENST00000613546 102 ntBASIC2.18□□□□□ -2.06
ATRIPQ8WXE1 uc_338.20-201ENST00000621563 178 ntBASIC2.18□□□□□ -2.06
ATRIPQ8WXE1 RNU6-674P-201ENST00000363831 107 ntBASIC2.17□□□□□ -2.06
ATRIPQ8WXE1 Y_RNA.203-201ENST00000364106 102 ntBASIC2.17□□□□□ -2.06
ATRIPQ8WXE1 RNU6-312P-201ENST00000364629 107 ntBASIC2.17□□□□□ -2.06
ATRIPQ8WXE1 SNORD116-18-201ENST00000383961 92 ntBASIC2.17□□□□□ -2.06
ATRIPQ8WXE1 Y_RNA.621-201ENST00000411065 96 ntBASIC2.17□□□□□ -2.06
ATRIPQ8WXE1 AC108667.1-201ENST00000428618 249 ntBASIC2.17□□□□□ -2.06
ATRIPQ8WXE1 AC233266.1-201ENST00000454518 96 ntBASIC2.17□□□□□ -2.06
ATRIPQ8WXE1 AL163195.1-201ENST00000496941 348 ntBASIC2.17□□□□□ -2.06
ATRIPQ8WXE1 RNU1-142P-201ENST00000516682 145 ntBASIC2.17□□□□□ -2.06
ATRIPQ8WXE1 MIR5688-201ENST00000580619 83 ntBASIC2.17□□□□□ -2.06
ATRIPQ8WXE1 AL049861.1-201ENST00000603130 150 ntBASIC2.17□□□□□ -2.06
ATRIPQ8WXE1 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.17□□□□□ -2.06
ATRIPQ8WXE1 snoU13.31-201ENST00000607291 104 ntBASIC2.17□□□□□ -2.06
ATRIPQ8WXE1 AC242852.1-201ENST00000612151 96 ntBASIC2.17□□□□□ -2.06
ATRIPQ8WXE1 AC244015.1-201ENST00000622301 99 ntBASIC2.17□□□□□ -2.06
ATRIPQ8WXE1 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
ATRIPQ8WXE1 RNU4-84P-201ENST00000364200 139 ntBASIC2.16□□□□□ -2.06
ATRIPQ8WXE1 Y_RNA.267-201ENST00000364679 109 ntBASIC2.16□□□□□ -2.06
ATRIPQ8WXE1 RNU6-818P-201ENST00000364837 108 ntBASIC2.16□□□□□ -2.06
ATRIPQ8WXE1 RNU6-746P-201ENST00000384112 109 ntBASIC2.16□□□□□ -2.06
ATRIPQ8WXE1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
ATRIPQ8WXE1 Y_RNA.622-201ENST00000411091 108 ntBASIC2.16□□□□□ -2.06
ATRIPQ8WXE1 AL121914.1-201ENST00000450188 156 ntBASIC2.16□□□□□ -2.06
ATRIPQ8WXE1 RPS26P45-201ENST00000471748 340 ntBASIC2.16□□□□□ -2.06
ATRIPQ8WXE1 RNU7-200P-201ENST00000516105 62 ntBASIC2.16□□□□□ -2.06
ATRIPQ8WXE1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.16□□□□□ -2.06
ATRIPQ8WXE1 RPL23AP91-201ENST00000569211 455 ntBASIC2.16□□□□□ -2.06
ATRIPQ8WXE1 AL021707.8-201ENST00000609428 183 ntBASIC2.16□□□□□ -2.06
ATRIPQ8WXE1 MIR6079-201ENST00000635807 62 ntBASIC2.16□□□□□ -2.06
ATRIPQ8WXE1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.16□□□□□ -2.06
ATRIPQ8WXE1 AC100821.1-201ENST00000523153 2479 ntBASIC2.16□□□□□ -2.06
ATRIPQ8WXE1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
ATRIPQ8WXE1 AC018630.2-201ENST00000534866 2403 ntBASIC2.15□□□□□ -2.07
ATRIPQ8WXE1 MIR378A-201ENST00000362177 66 ntBASIC2.15□□□□□ -2.07
ATRIPQ8WXE1 MIR515-2-201ENST00000384883 83 ntBASIC2.15□□□□□ -2.07
ATRIPQ8WXE1 MIR515-1-201ENST00000384884 83 ntBASIC2.15□□□□□ -2.07
ATRIPQ8WXE1 MIR15B-201ENST00000385045 98 ntBASIC2.15□□□□□ -2.07
ATRIPQ8WXE1 MIR520G-201ENST00000385064 90 ntBASIC2.15□□□□□ -2.07
ATRIPQ8WXE1 Y_RNA.587-201ENST00000391210 103 ntBASIC2.15□□□□□ -2.07
ATRIPQ8WXE1 RN7SKP101-201ENST00000411376 320 ntBASIC2.15□□□□□ -2.07
ATRIPQ8WXE1 AL606517.2-201ENST00000442855 241 ntBASIC2.15□□□□□ -2.07
ATRIPQ8WXE1 RN7SL274P-201ENST00000492268 272 ntBASIC2.15□□□□□ -2.07
ATRIPQ8WXE1 Y_RNA.703-201ENST00000516846 111 ntBASIC2.15□□□□□ -2.07
ATRIPQ8WXE1 AC024995.1-201ENST00000523014 93 ntBASIC2.15□□□□□ -2.07
ATRIPQ8WXE1 U1.36-201ENST00000620684 176 ntBASIC2.15□□□□□ -2.07
ATRIPQ8WXE1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
ATRIPQ8WXE1 RNU6-1209P-201ENST00000363655 107 ntBASIC2.14□□□□□ -2.07
ATRIPQ8WXE1 Y_RNA.796-201ENST00000364268 102 ntBASIC2.14□□□□□ -2.07
ATRIPQ8WXE1 Y_RNA.799-201ENST00000364992 102 ntBASIC2.14□□□□□ -2.07
ATRIPQ8WXE1 Y_RNA.355-201ENST00000365462 98 ntBASIC2.14□□□□□ -2.07
ATRIPQ8WXE1 Y_RNA.357-201ENST00000365487 109 ntBASIC2.14□□□□□ -2.07
ATRIPQ8WXE1 RNU6-1228P-201ENST00000391014 107 ntBASIC2.14□□□□□ -2.07
ATRIPQ8WXE1 SNORA40.18-201ENST00000391200 128 ntBASIC2.14□□□□□ -2.07
ATRIPQ8WXE1 RNA5SP489-201ENST00000410986 109 ntBASIC2.14□□□□□ -2.07
ATRIPQ8WXE1 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.14□□□□□ -2.07
ATRIPQ8WXE1 AC245517.4-201ENST00000448601 281 ntBASIC2.14□□□□□ -2.07
ATRIPQ8WXE1 RNA5SP57-201ENST00000459463 123 ntBASIC2.14□□□□□ -2.07
ATRIPQ8WXE1 RNA5SP182-201ENST00000516064 82 ntBASIC2.14□□□□□ -2.07
ATRIPQ8WXE1 RNVU1-2-201ENST00000516326 135 ntBASIC2.14□□□□□ -2.07
ATRIPQ8WXE1 MIR4431-201ENST00000579990 94 ntBASIC2.14□□□□□ -2.07
ATRIPQ8WXE1 MIR4713-201ENST00000582691 75 ntBASIC2.14□□□□□ -2.07
ATRIPQ8WXE1 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.14□□□□□ -2.07
ATRIPQ8WXE1 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.14□□□□□ -2.07
ATRIPQ8WXE1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
ATRIPQ8WXE1 SUMO2P12-201ENST00000405924 140 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms