Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
SLC44A3Q8N4M1 AC245047.4-201ENST00000433189 144 ntBASIC2.26□□□□□ -2.05
SLC44A3Q8N4M1 RNU1-131P-201ENST00000458943 161 ntBASIC2.26□□□□□ -2.05
SLC44A3Q8N4M1 NDUFA4P2-201ENST00000489989 244 ntBASIC2.26□□□□□ -2.05
SLC44A3Q8N4M1 RNA5SP200-201ENST00000516360 103 ntBASIC2.26□□□□□ -2.05
SLC44A3Q8N4M1 RNU6-659P-201ENST00000516454 104 ntBASIC2.26□□□□□ -2.05
SLC44A3Q8N4M1 AP001328.1-201ENST00000528550 176 ntBASIC2.26□□□□□ -2.05
SLC44A3Q8N4M1 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.26□□□□□ -2.05
SLC44A3Q8N4M1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SLC44A3Q8N4M1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.26□□□□□ -2.05
SLC44A3Q8N4M1 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.25□□□□□ -2.05
SLC44A3Q8N4M1 Y_RNA.226-201ENST00000364337 114 ntBASIC2.25□□□□□ -2.05
SLC44A3Q8N4M1 Y_RNA.273-201ENST00000364703 102 ntBASIC2.25□□□□□ -2.05
SLC44A3Q8N4M1 RNU6-915P-201ENST00000364943 103 ntBASIC2.25□□□□□ -2.05
SLC44A3Q8N4M1 RNU6-215P-201ENST00000365169 102 ntBASIC2.25□□□□□ -2.05
SLC44A3Q8N4M1 AL445646.1-201ENST00000431784 216 ntBASIC2.25□□□□□ -2.05
SLC44A3Q8N4M1 RNU7-26P-201ENST00000458980 63 ntBASIC2.25□□□□□ -2.05
SLC44A3Q8N4M1 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.25□□□□□ -2.05
SLC44A3Q8N4M1 RNU6-1146P-201ENST00000516282 102 ntBASIC2.25□□□□□ -2.05
SLC44A3Q8N4M1 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.25□□□□□ -2.05
SLC44A3Q8N4M1 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.25□□□□□ -2.05
SLC44A3Q8N4M1 AC007336.1-201ENST00000576365 3828 ntBASIC2.25□□□□□ -2.05
SLC44A3Q8N4M1 AC007229.1-201ENST00000590455 412 ntBASIC2.25□□□□□ -2.05
SLC44A3Q8N4M1 AP000942.3-201ENST00000603702 160 ntBASIC2.25□□□□□ -2.05
SLC44A3Q8N4M1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.25□□□□□ -2.05
SLC44A3Q8N4M1 AL449363.1-201ENST00000617815 186 ntBASIC2.25□□□□□ -2.05
SLC44A3Q8N4M1 MIR203B-201ENST00000636080 86 ntBASIC2.25□□□□□ -2.05
SLC44A3Q8N4M1 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SLC44A3Q8N4M1 Y_RNA.66-201ENST00000362862 102 ntBASIC2.24□□□□□ -2.05
SLC44A3Q8N4M1 Y_RNA.563-201ENST00000384707 108 ntBASIC2.24□□□□□ -2.05
SLC44A3Q8N4M1 MIR144-201ENST00000384886 86 ntBASIC2.24□□□□□ -2.05
SLC44A3Q8N4M1 RNA5SP467-201ENST00000391274 118 ntBASIC2.24□□□□□ -2.05
SLC44A3Q8N4M1 RPS26P45-201ENST00000471748 340 ntBASIC2.24□□□□□ -2.05
SLC44A3Q8N4M1 RNU6-1041P-201ENST00000516254 102 ntBASIC2.24□□□□□ -2.05
SLC44A3Q8N4M1 SCARNA16.3-201ENST00000516595 184 ntBASIC2.24□□□□□ -2.05
SLC44A3Q8N4M1 RNU7-149P-201ENST00000516739 59 ntBASIC2.24□□□□□ -2.05
SLC44A3Q8N4M1 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.24□□□□□ -2.05
SLC44A3Q8N4M1 U4atac.1-201ENST00000618345 95 ntBASIC2.24□□□□□ -2.05
SLC44A3Q8N4M1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
SLC44A3Q8N4M1 RNU1-17P-201ENST00000363022 152 ntBASIC2.23□□□□□ -2.05
SLC44A3Q8N4M1 Y_RNA.253-201ENST00000364562 112 ntBASIC2.23□□□□□ -2.05
SLC44A3Q8N4M1 Y_RNA.353-201ENST00000365440 108 ntBASIC2.23□□□□□ -2.05
SLC44A3Q8N4M1 RNU6-1186P-201ENST00000410429 97 ntBASIC2.23□□□□□ -2.05
SLC44A3Q8N4M1 RNU4-57P-201ENST00000515980 135 ntBASIC2.23□□□□□ -2.05
SLC44A3Q8N4M1 RNA5SP82-201ENST00000516707 92 ntBASIC2.23□□□□□ -2.05
SLC44A3Q8N4M1 RNU2-60P-201ENST00000517290 128 ntBASIC2.23□□□□□ -2.05
SLC44A3Q8N4M1 AC007751.1-201ENST00000529260 376 ntBASIC2.23□□□□□ -2.05
SLC44A3Q8N4M1 AC011603.4-201ENST00000611325 277 ntBASIC2.23□□□□□ -2.05
SLC44A3Q8N4M1 MIR6132-201ENST00000622083 109 ntBASIC2.23□□□□□ -2.05
SLC44A3Q8N4M1 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.23□□□□□ -2.05
SLC44A3Q8N4M1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SLC44A3Q8N4M1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SLC44A3Q8N4M1 SNORA25.7-201ENST00000364375 127 ntBASIC2.22□□□□□ -2.05
SLC44A3Q8N4M1 RNU6-1080P-201ENST00000383982 107 ntBASIC2.22□□□□□ -2.05
SLC44A3Q8N4M1 Y_RNA.486-201ENST00000384398 107 ntBASIC2.22□□□□□ -2.05
SLC44A3Q8N4M1 SNORD20-201ENST00000384550 80 ntBASIC2.22□□□□□ -2.05
SLC44A3Q8N4M1 Y_RNA.584-201ENST00000391090 114 ntBASIC2.22□□□□□ -2.05
SLC44A3Q8N4M1 EDDM3CP-201ENST00000415977 425 ntBASIC2.22□□□□□ -2.05
SLC44A3Q8N4M1 OR9P1P-201ENST00000496431 281 ntBASIC2.22□□□□□ -2.05
SLC44A3Q8N4M1 AC108729.3-201ENST00000513484 108 ntBASIC2.22□□□□□ -2.05
SLC44A3Q8N4M1 Y_RNA.686-201ENST00000516548 134 ntBASIC2.22□□□□□ -2.05
SLC44A3Q8N4M1 RNU6-1291P-201ENST00000516591 104 ntBASIC2.22□□□□□ -2.05
SLC44A3Q8N4M1 RNU2-56P-201ENST00000516826 190 ntBASIC2.22□□□□□ -2.05
SLC44A3Q8N4M1 MIR4658-201ENST00000584344 65 ntBASIC2.22□□□□□ -2.05
SLC44A3Q8N4M1 AL359075.3-201ENST00000613288 217 ntBASIC2.22□□□□□ -2.05
SLC44A3Q8N4M1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.22□□□□□ -2.05
SLC44A3Q8N4M1 AC009831.4-201ENST00000620744 325 ntBASIC2.22□□□□□ -2.05
SLC44A3Q8N4M1 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.22□□□□□ -2.05
SLC44A3Q8N4M1 MIR6079-201ENST00000635807 62 ntBASIC2.22□□□□□ -2.05
SLC44A3Q8N4M1 AC018630.2-201ENST00000534866 2403 ntBASIC2.22□□□□□ -2.05
SLC44A3Q8N4M1 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
SLC44A3Q8N4M1 U8.1-201ENST00000362843 134 ntBASIC2.21□□□□□ -2.06
SLC44A3Q8N4M1 Y_RNA.525-201ENST00000384570 113 ntBASIC2.21□□□□□ -2.06
SLC44A3Q8N4M1 RNU6-1072P-201ENST00000384703 107 ntBASIC2.21□□□□□ -2.06
SLC44A3Q8N4M1 RNU6-443P-201ENST00000384780 107 ntBASIC2.21□□□□□ -2.06
SLC44A3Q8N4M1 MIR1287-201ENST00000408492 90 ntBASIC2.21□□□□□ -2.06
SLC44A3Q8N4M1 RNU2-70P-201ENST00000410718 179 ntBASIC2.21□□□□□ -2.06
SLC44A3Q8N4M1 AL158823.1-201ENST00000418441 478 ntBASIC2.21□□□□□ -2.06
SLC44A3Q8N4M1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.21□□□□□ -2.06
SLC44A3Q8N4M1 AC011753.1-201ENST00000451001 220 ntBASIC2.21□□□□□ -2.06
SLC44A3Q8N4M1 RNU7-107P-201ENST00000459121 61 ntBASIC2.21□□□□□ -2.06
SLC44A3Q8N4M1 HMGN1P7-201ENST00000491722 313 ntBASIC2.21□□□□□ -2.06
SLC44A3Q8N4M1 MRPS17P9-201ENST00000511924 393 ntBASIC2.21□□□□□ -2.06
SLC44A3Q8N4M1 RNU6-341P-201ENST00000516973 96 ntBASIC2.21□□□□□ -2.06
SLC44A3Q8N4M1 Y_RNA.712-201ENST00000517011 92 ntBASIC2.21□□□□□ -2.06
SLC44A3Q8N4M1 AC090142.3-201ENST00000519012 385 ntBASIC2.21□□□□□ -2.06
SLC44A3Q8N4M1 AL358944.1-201ENST00000528537 144 ntBASIC2.21□□□□□ -2.06
SLC44A3Q8N4M1 MIR4662B-201ENST00000579498 81 ntBASIC2.21□□□□□ -2.06
SLC44A3Q8N4M1 AL365205.2-201ENST00000594586 68 ntBASIC2.21□□□□□ -2.06
SLC44A3Q8N4M1 Pinc.1-201ENST00000616452 154 ntBASIC2.21□□□□□ -2.06
SLC44A3Q8N4M1 AC022513.1-201ENST00000624512 117 ntBASIC2.21□□□□□ -2.06
SLC44A3Q8N4M1 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.21□□□□□ -2.06
SLC44A3Q8N4M1 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.2□□□□□ -2.06
SLC44A3Q8N4M1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SLC44A3Q8N4M1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
SLC44A3Q8N4M1 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SLC44A3Q8N4M1 Y_RNA.120-201ENST00000363304 110 ntBASIC2.2□□□□□ -2.06
SLC44A3Q8N4M1 Y_RNA.294-201ENST00000364916 102 ntBASIC2.2□□□□□ -2.06
SLC44A3Q8N4M1 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.2□□□□□ -2.06
SLC44A3Q8N4M1 AC009238.1-201ENST00000442165 424 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 205.6 ms