Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.77□□□□□ -2.13
HERC6Q8IVU3 AC068700.1-201ENST00000565862 3754 ntBASIC1.77□□□□□ -2.13
HERC6Q8IVU3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.76□□□□□ -2.13
HERC6Q8IVU3 UBE2WP1-201ENST00000362030 340 ntBASIC1.76□□□□□ -2.13
HERC6Q8IVU3 SNORA25.1-201ENST00000362326 128 ntBASIC1.76□□□□□ -2.13
HERC6Q8IVU3 SNORD27-201ENST00000363981 72 ntBASIC1.76□□□□□ -2.13
HERC6Q8IVU3 RNU6-1323P-201ENST00000384025 107 ntBASIC1.76□□□□□ -2.13
HERC6Q8IVU3 RNU6-514P-201ENST00000384208 107 ntBASIC1.76□□□□□ -2.13
HERC6Q8IVU3 SNORA72-201ENST00000384339 132 ntBASIC1.76□□□□□ -2.13
HERC6Q8IVU3 SNORA26.5-201ENST00000391215 123 ntBASIC1.76□□□□□ -2.13
HERC6Q8IVU3 Y_RNA.618-201ENST00000410949 107 ntBASIC1.76□□□□□ -2.13
HERC6Q8IVU3 RPS4XP11-201ENST00000446897 772 ntBASIC1.76□□□□□ -2.13
HERC6Q8IVU3 AC136628.3-201ENST00000521868 290 ntBASIC1.76□□□□□ -2.13
HERC6Q8IVU3 AC068647.2-201ENST00000637380 353 ntBASIC1.76□□□□□ -2.13
HERC6Q8IVU3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HERC6Q8IVU3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
HERC6Q8IVU3 Y_RNA.20-201ENST00000362479 113 ntBASIC1.75□□□□□ -2.13
HERC6Q8IVU3 Y_RNA.76-201ENST00000362931 109 ntBASIC1.75□□□□□ -2.13
HERC6Q8IVU3 SNORA7.1-201ENST00000363750 139 ntBASIC1.75□□□□□ -2.13
HERC6Q8IVU3 RNU6-1048P-201ENST00000364054 107 ntBASIC1.75□□□□□ -2.13
HERC6Q8IVU3 Y_RNA.275-201ENST00000364726 110 ntBASIC1.75□□□□□ -2.13
HERC6Q8IVU3 MIR194-1-201ENST00000384892 85 ntBASIC1.75□□□□□ -2.13
HERC6Q8IVU3 MIR513A1-201ENST00000385138 129 ntBASIC1.75□□□□□ -2.13
HERC6Q8IVU3 SNORA67.6-201ENST00000391093 99 ntBASIC1.75□□□□□ -2.13
HERC6Q8IVU3 RNU1-78P-201ENST00000391248 165 ntBASIC1.75□□□□□ -2.13
HERC6Q8IVU3 SNORD58.1-201ENST00000391313 66 ntBASIC1.75□□□□□ -2.13
HERC6Q8IVU3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.75□□□□□ -2.13
HERC6Q8IVU3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.75□□□□□ -2.13
HERC6Q8IVU3 AC079140.2-201ENST00000506193 142 ntBASIC1.75□□□□□ -2.13
HERC6Q8IVU3 RNU6-1023P-201ENST00000516137 106 ntBASIC1.75□□□□□ -2.13
HERC6Q8IVU3 Y_RNA.714-201ENST00000517065 90 ntBASIC1.75□□□□□ -2.13
HERC6Q8IVU3 RNU6-111P-201ENST00000517179 105 ntBASIC1.75□□□□□ -2.13
HERC6Q8IVU3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.75□□□□□ -2.13
HERC6Q8IVU3 AL512605.2-201ENST00000592972 256 ntBASIC1.75□□□□□ -2.13
HERC6Q8IVU3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.75□□□□□ -2.13
HERC6Q8IVU3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.75□□□□□ -2.13
HERC6Q8IVU3 SNORD3E-202ENST00000627253 216 ntBASIC1.75□□□□□ -2.13
HERC6Q8IVU3 snoU18.1-201ENST00000629629 71 ntBASIC1.75□□□□□ -2.13
HERC6Q8IVU3 AC134026.1-201ENST00000623249 2239 ntBASIC1.75□□□□□ -2.13
HERC6Q8IVU3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
HERC6Q8IVU3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.74□□□□□ -2.13
HERC6Q8IVU3 Y_RNA.54-201ENST00000362766 105 ntBASIC1.74□□□□□ -2.13
HERC6Q8IVU3 RNA5SP259-201ENST00000365541 109 ntBASIC1.74□□□□□ -2.13
HERC6Q8IVU3 RNU6-1289P-201ENST00000384431 106 ntBASIC1.74□□□□□ -2.13
HERC6Q8IVU3 RNU6-763P-201ENST00000390865 106 ntBASIC1.74□□□□□ -2.13
HERC6Q8IVU3 AL161935.2-201ENST00000414627 60 ntBASIC1.74□□□□□ -2.13
HERC6Q8IVU3 AC005908.1-201ENST00000468701 347 ntBASIC1.74□□□□□ -2.13
HERC6Q8IVU3 MIR3671-201ENST00000580455 88 ntBASIC1.74□□□□□ -2.13
HERC6Q8IVU3 POLR3GP1-201ENST00000594073 261 ntBASIC1.74□□□□□ -2.13
HERC6Q8IVU3 AC095038.3-201ENST00000634439 195 ntBASIC1.74□□□□□ -2.13
HERC6Q8IVU3 SNORA20.1-201ENST00000364790 130 ntBASIC1.73□□□□□ -2.13
HERC6Q8IVU3 U8.7-201ENST00000364940 136 ntBASIC1.73□□□□□ -2.13
HERC6Q8IVU3 RNU6-338P-201ENST00000383888 105 ntBASIC1.73□□□□□ -2.13
HERC6Q8IVU3 RNU6-1065P-201ENST00000384513 106 ntBASIC1.73□□□□□ -2.13
HERC6Q8IVU3 MIR548H3-201ENST00000408771 118 ntBASIC1.73□□□□□ -2.13
HERC6Q8IVU3 AC099513.1-201ENST00000490423 301 ntBASIC1.73□□□□□ -2.13
HERC6Q8IVU3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.73□□□□□ -2.13
HERC6Q8IVU3 RNU6-388P-201ENST00000517012 105 ntBASIC1.73□□□□□ -2.13
HERC6Q8IVU3 RNU6-389P-201ENST00000517048 105 ntBASIC1.73□□□□□ -2.13
HERC6Q8IVU3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.73□□□□□ -2.13
HERC6Q8IVU3 MIR4282-201ENST00000583613 67 ntBASIC1.73□□□□□ -2.13
HERC6Q8IVU3 AC011921.3-201ENST00000605540 361 ntBASIC1.73□□□□□ -2.13
HERC6Q8IVU3 AL008718.3-201ENST00000610217 321 ntBASIC1.73□□□□□ -2.13
HERC6Q8IVU3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.73□□□□□ -2.13
HERC6Q8IVU3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.73□□□□□ -2.13
HERC6Q8IVU3 Y_RNA.65-201ENST00000362846 100 ntBASIC1.72□□□□□ -2.13
HERC6Q8IVU3 SNORA72.4-201ENST00000384174 132 ntBASIC1.72□□□□□ -2.13
HERC6Q8IVU3 Y_RNA.478-201ENST00000384358 107 ntBASIC1.72□□□□□ -2.13
HERC6Q8IVU3 MIR660-201ENST00000385235 97 ntBASIC1.72□□□□□ -2.13
HERC6Q8IVU3 AC015688.6-201ENST00000577737 104 ntBASIC1.72□□□□□ -2.13
HERC6Q8IVU3 MIR4421-201ENST00000578133 69 ntBASIC1.72□□□□□ -2.13
HERC6Q8IVU3 AC078938.1-201ENST00000620993 318 ntBASIC1.72□□□□□ -2.13
HERC6Q8IVU3 ZNF209P-201ENST00000593450 2304 ntBASIC1.71□□□□□ -2.14
HERC6Q8IVU3 RNU6-1272P-201ENST00000362776 107 ntBASIC1.71□□□□□ -2.14
HERC6Q8IVU3 Y_RNA.82-201ENST00000363000 102 ntBASIC1.71□□□□□ -2.14
HERC6Q8IVU3 Y_RNA.92-201ENST00000363043 102 ntBASIC1.71□□□□□ -2.14
HERC6Q8IVU3 Y_RNA.191-201ENST00000363972 113 ntBASIC1.71□□□□□ -2.14
HERC6Q8IVU3 Y_RNA.235-201ENST00000364412 102 ntBASIC1.71□□□□□ -2.14
HERC6Q8IVU3 SNORD1A-201ENST00000364968 72 ntBASIC1.71□□□□□ -2.14
HERC6Q8IVU3 Y_RNA.306-201ENST00000365015 102 ntBASIC1.71□□□□□ -2.14
HERC6Q8IVU3 Y_RNA.312-201ENST00000365089 102 ntBASIC1.71□□□□□ -2.14
HERC6Q8IVU3 Y_RNA.322-201ENST00000365151 102 ntBASIC1.71□□□□□ -2.14
HERC6Q8IVU3 RNU6-1080P-201ENST00000383982 107 ntBASIC1.71□□□□□ -2.14
HERC6Q8IVU3 Y_RNA.476-201ENST00000384347 108 ntBASIC1.71□□□□□ -2.14
HERC6Q8IVU3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.71□□□□□ -2.14
HERC6Q8IVU3 AC104332.1-201ENST00000440471 797 ntBASIC1.71□□□□□ -2.14
HERC6Q8IVU3 SNORD2.1-201ENST00000458762 69 ntBASIC1.71□□□□□ -2.14
HERC6Q8IVU3 RNU1-123P-201ENST00000458950 160 ntBASIC1.71□□□□□ -2.14
HERC6Q8IVU3 Y_RNA.650-201ENST00000459002 102 ntBASIC1.71□□□□□ -2.14
HERC6Q8IVU3 HMGN1P7-201ENST00000491722 313 ntBASIC1.71□□□□□ -2.14
HERC6Q8IVU3 OR9P1P-201ENST00000496431 281 ntBASIC1.71□□□□□ -2.14
HERC6Q8IVU3 SNORD116-28-201ENST00000516123 91 ntBASIC1.71□□□□□ -2.14
HERC6Q8IVU3 RNA5SP168-201ENST00000516642 112 ntBASIC1.71□□□□□ -2.14
HERC6Q8IVU3 Y_RNA.777-201ENST00000516982 102 ntBASIC1.71□□□□□ -2.14
HERC6Q8IVU3 RNU1-92P-201ENST00000517017 135 ntBASIC1.71□□□□□ -2.14
HERC6Q8IVU3 MIR4285-201ENST00000581001 85 ntBASIC1.71□□□□□ -2.14
HERC6Q8IVU3 AC005357.1-201ENST00000588399 301 ntBASIC1.71□□□□□ -2.14
HERC6Q8IVU3 Y_RNA.771-201ENST00000598668 102 ntBASIC1.71□□□□□ -2.14
HERC6Q8IVU3 AP003357.1-201ENST00000604497 148 ntBASIC1.71□□□□□ -2.14
HERC6Q8IVU3 BX284668.6-201ENST00000606899 438 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms