Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 RNU6-103P-201ENST00000363686 107 ntBASIC2.28□□□□□ -2.04
RNF180Q86T96 MIR802-201ENST00000390235 94 ntBASIC2.28□□□□□ -2.04
RNF180Q86T96 SNORA40.18-201ENST00000391200 128 ntBASIC2.28□□□□□ -2.04
RNF180Q86T96 RNU6-381P-201ENST00000391259 108 ntBASIC2.28□□□□□ -2.04
RNF180Q86T96 MLLT10P1-201ENST00000418346 262 ntBASIC2.28□□□□□ -2.04
RNF180Q86T96 AC107393.1-201ENST00000512403 346 ntBASIC2.28□□□□□ -2.04
RNF180Q86T96 MIR4498-201ENST00000577599 66 ntBASIC2.28□□□□□ -2.04
RNF180Q86T96 AL627230.6-201ENST00000611129 280 ntBASIC2.28□□□□□ -2.04
RNF180Q86T96 FTX_2.1-201ENST00000618816 94 ntBASIC2.28□□□□□ -2.04
RNF180Q86T96 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RNF180Q86T96 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RNF180Q86T96 Y_RNA.7-201ENST00000362352 102 ntBASIC2.27□□□□□ -2.05
RNF180Q86T96 Y_RNA.796-201ENST00000364268 102 ntBASIC2.27□□□□□ -2.05
RNF180Q86T96 Y_RNA.799-201ENST00000364992 102 ntBASIC2.27□□□□□ -2.05
RNF180Q86T96 MIR1287-201ENST00000408492 90 ntBASIC2.27□□□□□ -2.05
RNF180Q86T96 RN7SKP101-201ENST00000411376 320 ntBASIC2.27□□□□□ -2.05
RNF180Q86T96 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.27□□□□□ -2.05
RNF180Q86T96 RNU6-1053P-201ENST00000515930 101 ntBASIC2.27□□□□□ -2.05
RNF180Q86T96 SNORA44.1-201ENST00000517031 108 ntBASIC2.27□□□□□ -2.05
RNF180Q86T96 AL391903.3-201ENST00000612158 163 ntBASIC2.27□□□□□ -2.05
RNF180Q86T96 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
RNF180Q86T96 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
RNF180Q86T96 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
RNF180Q86T96 RNU6-1084P-201ENST00000362498 107 ntBASIC2.26□□□□□ -2.05
RNF180Q86T96 Y_RNA.121-201ENST00000363309 113 ntBASIC2.26□□□□□ -2.05
RNF180Q86T96 snoU2_19.4-201ENST00000364329 80 ntBASIC2.26□□□□□ -2.05
RNF180Q86T96 Y_RNA.233-201ENST00000364407 101 ntBASIC2.26□□□□□ -2.05
RNF180Q86T96 U8.5-201ENST00000364528 136 ntBASIC2.26□□□□□ -2.05
RNF180Q86T96 RNY3P5-201ENST00000384127 102 ntBASIC2.26□□□□□ -2.05
RNF180Q86T96 RNU4-70P-201ENST00000384579 139 ntBASIC2.26□□□□□ -2.05
RNF180Q86T96 Y_RNA.571-201ENST00000384753 98 ntBASIC2.26□□□□□ -2.05
RNF180Q86T96 AL445685.2-201ENST00000422551 342 ntBASIC2.26□□□□□ -2.05
RNF180Q86T96 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.26□□□□□ -2.05
RNF180Q86T96 RNU6-126P-201ENST00000516685 103 ntBASIC2.26□□□□□ -2.05
RNF180Q86T96 AC022254.1-201ENST00000567857 235 ntBASIC2.26□□□□□ -2.05
RNF180Q86T96 AL513423.1-201ENST00000621695 132 ntBASIC2.26□□□□□ -2.05
RNF180Q86T96 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
RNF180Q86T96 Y_RNA.229-201ENST00000364347 113 ntBASIC2.25□□□□□ -2.05
RNF180Q86T96 snoU2-30.1-201ENST00000365012 70 ntBASIC2.25□□□□□ -2.05
RNF180Q86T96 Y_RNA.555-201ENST00000384673 110 ntBASIC2.25□□□□□ -2.05
RNF180Q86T96 Y_RNA.572-201ENST00000384757 98 ntBASIC2.25□□□□□ -2.05
RNF180Q86T96 MIR616-201ENST00000385293 97 ntBASIC2.25□□□□□ -2.05
RNF180Q86T96 RPS27P21-201ENST00000486977 252 ntBASIC2.25□□□□□ -2.05
RNF180Q86T96 OR9P1P-201ENST00000496431 281 ntBASIC2.25□□□□□ -2.05
RNF180Q86T96 CYCTP-201ENST00000504253 315 ntBASIC2.25□□□□□ -2.05
RNF180Q86T96 MRPS17P9-201ENST00000511924 393 ntBASIC2.25□□□□□ -2.05
RNF180Q86T96 MIR4762-201ENST00000585261 75 ntBASIC2.25□□□□□ -2.05
RNF180Q86T96 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.25□□□□□ -2.05
RNF180Q86T96 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
RNF180Q86T96 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
RNF180Q86T96 AL596028.1-201ENST00000326971 197 ntBASIC2.24□□□□□ -2.05
RNF180Q86T96 Y_RNA.118-201ENST00000363300 101 ntBASIC2.24□□□□□ -2.05
RNF180Q86T96 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
RNF180Q86T96 RNU6-1228P-201ENST00000391014 107 ntBASIC2.24□□□□□ -2.05
RNF180Q86T96 MIR548I3-201ENST00000408378 149 ntBASIC2.24□□□□□ -2.05
RNF180Q86T96 MIR548I1-201ENST00000408810 149 ntBASIC2.24□□□□□ -2.05
RNF180Q86T96 AC108667.1-201ENST00000428618 249 ntBASIC2.24□□□□□ -2.05
RNF180Q86T96 HMGN2P32-201ENST00000444648 269 ntBASIC2.24□□□□□ -2.05
RNF180Q86T96 PGBD4P5-201ENST00000445958 426 ntBASIC2.24□□□□□ -2.05
RNF180Q86T96 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.24□□□□□ -2.05
RNF180Q86T96 AC079804.2-201ENST00000490376 200 ntBASIC2.24□□□□□ -2.05
RNF180Q86T96 AC022559.1-201ENST00000520905 205 ntBASIC2.24□□□□□ -2.05
RNF180Q86T96 MIR4662B-201ENST00000579498 81 ntBASIC2.24□□□□□ -2.05
RNF180Q86T96 AC021506.2-201ENST00000612354 169 ntBASIC2.24□□□□□ -2.05
RNF180Q86T96 RNU6-682P-201ENST00000363843 106 ntBASIC2.23□□□□□ -2.05
RNF180Q86T96 RNU6-163P-201ENST00000384396 106 ntBASIC2.23□□□□□ -2.05
RNF180Q86T96 MIR522-201ENST00000385071 87 ntBASIC2.23□□□□□ -2.05
RNF180Q86T96 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
RNF180Q86T96 MIR1267-201ENST00000408723 78 ntBASIC2.23□□□□□ -2.05
RNF180Q86T96 MIR1278-201ENST00000408753 81 ntBASIC2.23□□□□□ -2.05
RNF180Q86T96 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.23□□□□□ -2.05
RNF180Q86T96 AL356379.1-201ENST00000414105 126 ntBASIC2.23□□□□□ -2.05
RNF180Q86T96 SNORD11-201ENST00000459124 84 ntBASIC2.23□□□□□ -2.05
RNF180Q86T96 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.23□□□□□ -2.05
RNF180Q86T96 AC120024.3-201ENST00000603167 156 ntBASIC2.23□□□□□ -2.05
RNF180Q86T96 RNU2-4P-201ENST00000606190 192 ntBASIC2.23□□□□□ -2.05
RNF180Q86T96 uc_338.4-201ENST00000616635 176 ntBASIC2.23□□□□□ -2.05
RNF180Q86T96 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RNF180Q86T96 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
RNF180Q86T96 RNU6-1123P-201ENST00000362347 106 ntBASIC2.22□□□□□ -2.05
RNF180Q86T96 SNORD14E-201ENST00000364009 85 ntBASIC2.22□□□□□ -2.05
RNF180Q86T96 Y_RNA.270-201ENST00000364693 104 ntBASIC2.22□□□□□ -2.05
RNF180Q86T96 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.22□□□□□ -2.05
RNF180Q86T96 HMGN2P19-201ENST00000425149 265 ntBASIC2.22□□□□□ -2.05
RNF180Q86T96 JTBP1-201ENST00000441314 247 ntBASIC2.22□□□□□ -2.05
RNF180Q86T96 AC245047.8-201ENST00000456455 284 ntBASIC2.22□□□□□ -2.05
RNF180Q86T96 SCARNA8-201ENST00000515924 131 ntBASIC2.22□□□□□ -2.05
RNF180Q86T96 RNU6-861P-201ENST00000516745 106 ntBASIC2.22□□□□□ -2.05
RNF180Q86T96 MIR4781-201ENST00000585250 76 ntBASIC2.22□□□□□ -2.05
RNF180Q86T96 AL049861.1-201ENST00000603130 150 ntBASIC2.22□□□□□ -2.05
RNF180Q86T96 AL021707.8-201ENST00000609428 183 ntBASIC2.22□□□□□ -2.05
RNF180Q86T96 MIR8074-201ENST00000615081 81 ntBASIC2.22□□□□□ -2.05
RNF180Q86T96 AC027279.3-201ENST00000625055 122 ntBASIC2.22□□□□□ -2.05
RNF180Q86T96 U6.106-201ENST00000636360 105 ntBASIC2.22□□□□□ -2.05
RNF180Q86T96 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
RNF180Q86T96 AC005336.3-201ENST00000623833 2679 ntBASIC2.21□□□□□ -2.06
RNF180Q86T96 Y_RNA.240-201ENST00000364469 95 ntBASIC2.21□□□□□ -2.06
RNF180Q86T96 RNU6-886P-201ENST00000384319 105 ntBASIC2.21□□□□□ -2.06
RNF180Q86T96 RNU6-424P-201ENST00000384367 105 ntBASIC2.21□□□□□ -2.06
RNF180Q86T96 SNORA12.1-201ENST00000390873 148 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms