Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 RNU6-341P-201ENST00000516973 96 ntBASIC2.05□□□□□ -2.08
KRT28Q7Z3Y7 AC024405.2-202ENST00000532731 184 ntBASIC2.05□□□□□ -2.08
KRT28Q7Z3Y7 AC022217.4-201ENST00000604389 163 ntBASIC2.05□□□□□ -2.08
KRT28Q7Z3Y7 BX284668.6-201ENST00000606899 438 ntBASIC2.05□□□□□ -2.08
KRT28Q7Z3Y7 MIR548AY-201ENST00000617669 107 ntBASIC2.05□□□□□ -2.08
KRT28Q7Z3Y7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.05□□□□□ -2.08
KRT28Q7Z3Y7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.05□□□□□ -2.08
KRT28Q7Z3Y7 Y_RNA.489-201ENST00000384410 101 ntBASIC2.04□□□□□ -2.08
KRT28Q7Z3Y7 RNU6-296P-201ENST00000384608 107 ntBASIC2.04□□□□□ -2.08
KRT28Q7Z3Y7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
KRT28Q7Z3Y7 COX6CP10-201ENST00000416832 224 ntBASIC2.04□□□□□ -2.08
KRT28Q7Z3Y7 AL354695.1-201ENST00000427935 228 ntBASIC2.04□□□□□ -2.08
KRT28Q7Z3Y7 AL606517.2-201ENST00000442855 241 ntBASIC2.04□□□□□ -2.08
KRT28Q7Z3Y7 RPL23AP54-201ENST00000495129 419 ntBASIC2.04□□□□□ -2.08
KRT28Q7Z3Y7 RNU7-115P-201ENST00000516433 55 ntBASIC2.04□□□□□ -2.08
KRT28Q7Z3Y7 RNA5SP364-201ENST00000516938 78 ntBASIC2.04□□□□□ -2.08
KRT28Q7Z3Y7 RNU6-1271P-201ENST00000517049 105 ntBASIC2.04□□□□□ -2.08
KRT28Q7Z3Y7 AP003357.1-201ENST00000604497 148 ntBASIC2.04□□□□□ -2.08
KRT28Q7Z3Y7 AL008718.3-201ENST00000610217 321 ntBASIC2.04□□□□□ -2.08
KRT28Q7Z3Y7 AC068700.1-201ENST00000565862 3754 ntBASIC2.03□□□□□ -2.08
KRT28Q7Z3Y7 MIR96-201ENST00000362288 78 ntBASIC2.03□□□□□ -2.08
KRT28Q7Z3Y7 RNU6-379P-201ENST00000363813 104 ntBASIC2.03□□□□□ -2.08
KRT28Q7Z3Y7 SNORA72-201ENST00000384339 132 ntBASIC2.03□□□□□ -2.08
KRT28Q7Z3Y7 RNU6-950P-201ENST00000384651 107 ntBASIC2.03□□□□□ -2.08
KRT28Q7Z3Y7 MIR676-201ENST00000390702 67 ntBASIC2.03□□□□□ -2.08
KRT28Q7Z3Y7 RNU6-651P-201ENST00000411040 105 ntBASIC2.03□□□□□ -2.08
KRT28Q7Z3Y7 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.03□□□□□ -2.08
KRT28Q7Z3Y7 AC244636.1-201ENST00000421152 228 ntBASIC2.03□□□□□ -2.08
KRT28Q7Z3Y7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.03□□□□□ -2.08
KRT28Q7Z3Y7 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.03□□□□□ -2.08
KRT28Q7Z3Y7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.03□□□□□ -2.08
KRT28Q7Z3Y7 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.03□□□□□ -2.08
KRT28Q7Z3Y7 SNORA31.17-201ENST00000516953 127 ntBASIC2.03□□□□□ -2.08
KRT28Q7Z3Y7 RNA5SP437-201ENST00000517249 129 ntBASIC2.03□□□□□ -2.08
KRT28Q7Z3Y7 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.03□□□□□ -2.08
KRT28Q7Z3Y7 AC012493.3-201ENST00000604494 112 ntBASIC2.03□□□□□ -2.08
KRT28Q7Z3Y7 Y_RNA.65-201ENST00000362846 100 ntBASIC2.02□□□□□ -2.09
KRT28Q7Z3Y7 Y_RNA.76-201ENST00000362931 109 ntBASIC2.02□□□□□ -2.09
KRT28Q7Z3Y7 RNU6-1205P-201ENST00000363625 106 ntBASIC2.02□□□□□ -2.09
KRT28Q7Z3Y7 Y_RNA.265-201ENST00000364677 108 ntBASIC2.02□□□□□ -2.09
KRT28Q7Z3Y7 Y_RNA.293-201ENST00000364908 93 ntBASIC2.02□□□□□ -2.09
KRT28Q7Z3Y7 RNU6-1080P-201ENST00000383982 107 ntBASIC2.02□□□□□ -2.09
KRT28Q7Z3Y7 RNU6-342P-201ENST00000384521 104 ntBASIC2.02□□□□□ -2.09
KRT28Q7Z3Y7 RNU6-440P-201ENST00000390882 105 ntBASIC2.02□□□□□ -2.09
KRT28Q7Z3Y7 SNORA36B-201ENST00000410438 131 ntBASIC2.02□□□□□ -2.09
KRT28Q7Z3Y7 RN7SKP200-201ENST00000410564 320 ntBASIC2.02□□□□□ -2.09
KRT28Q7Z3Y7 AC009310.1-201ENST00000414414 451 ntBASIC2.02□□□□□ -2.09
KRT28Q7Z3Y7 HSPE1P9-201ENST00000440046 311 ntBASIC2.02□□□□□ -2.09
KRT28Q7Z3Y7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.02□□□□□ -2.09
KRT28Q7Z3Y7 AL049830.1-201ENST00000468034 425 ntBASIC2.02□□□□□ -2.09
KRT28Q7Z3Y7 AP002004.2-201ENST00000531656 154 ntBASIC2.02□□□□□ -2.09
KRT28Q7Z3Y7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.02□□□□□ -2.09
KRT28Q7Z3Y7 AC013791.1-201ENST00000616619 62 ntBASIC2.02□□□□□ -2.09
KRT28Q7Z3Y7 MIR8054-201ENST00000620877 86 ntBASIC2.02□□□□□ -2.09
KRT28Q7Z3Y7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.02□□□□□ -2.09
KRT28Q7Z3Y7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
KRT28Q7Z3Y7 SNORA4.2-201ENST00000365313 147 ntBASIC2.01□□□□□ -2.09
KRT28Q7Z3Y7 RNU6-211P-201ENST00000384047 107 ntBASIC2.01□□□□□ -2.09
KRT28Q7Z3Y7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.01□□□□□ -2.09
KRT28Q7Z3Y7 RNU7-34P-201ENST00000459394 64 ntBASIC2.01□□□□□ -2.09
KRT28Q7Z3Y7 RNU6-111P-201ENST00000517179 105 ntBASIC2.01□□□□□ -2.09
KRT28Q7Z3Y7 AL358944.1-201ENST00000528537 144 ntBASIC2.01□□□□□ -2.09
KRT28Q7Z3Y7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.01□□□□□ -2.09
KRT28Q7Z3Y7 AC127455.1-201ENST00000565496 145 ntBASIC2.01□□□□□ -2.09
KRT28Q7Z3Y7 MIR4299-201ENST00000577899 72 ntBASIC2.01□□□□□ -2.09
KRT28Q7Z3Y7 MIR5692C2-201ENST00000577959 77 ntBASIC2.01□□□□□ -2.09
KRT28Q7Z3Y7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.01□□□□□ -2.09
KRT28Q7Z3Y7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.01□□□□□ -2.09
KRT28Q7Z3Y7 AC100821.1-201ENST00000523153 2479 ntBASIC2.01□□□□□ -2.09
KRT28Q7Z3Y7 SNORA1B-201ENST00000362535 133 ntBASIC2□□□□□ -2.09
KRT28Q7Z3Y7 Y_RNA.205-201ENST00000364128 113 ntBASIC2□□□□□ -2.09
KRT28Q7Z3Y7 Y_RNA.476-201ENST00000384347 108 ntBASIC2□□□□□ -2.09
KRT28Q7Z3Y7 RN7SL274P-201ENST00000492268 272 ntBASIC2□□□□□ -2.09
KRT28Q7Z3Y7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2□□□□□ -2.09
KRT28Q7Z3Y7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2□□□□□ -2.09
KRT28Q7Z3Y7 AC022254.1-201ENST00000567857 235 ntBASIC2□□□□□ -2.09
KRT28Q7Z3Y7 MIR4709-201ENST00000577272 72 ntBASIC2□□□□□ -2.09
KRT28Q7Z3Y7 AL627230.6-201ENST00000611129 280 ntBASIC2□□□□□ -2.09
KRT28Q7Z3Y7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
KRT28Q7Z3Y7 MIR1304-201ENST00000408243 91 ntBASIC1.99□□□□□ -2.09
KRT28Q7Z3Y7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.99□□□□□ -2.09
KRT28Q7Z3Y7 STAG3L5P-204ENST00000443759 179 ntBASIC1.99□□□□□ -2.09
KRT28Q7Z3Y7 snoU13.27-201ENST00000459278 104 ntBASIC1.99□□□□□ -2.09
KRT28Q7Z3Y7 COX6CP14-201ENST00000469580 174 ntBASIC1.99□□□□□ -2.09
KRT28Q7Z3Y7 RNU4-71P-201ENST00000516258 113 ntBASIC1.99□□□□□ -2.09
KRT28Q7Z3Y7 MIR4285-201ENST00000581001 85 ntBASIC1.99□□□□□ -2.09
KRT28Q7Z3Y7 AL929325.1-201ENST00000603096 117 ntBASIC1.99□□□□□ -2.09
KRT28Q7Z3Y7 AC009779.6-201ENST00000603972 165 ntBASIC1.99□□□□□ -2.09
KRT28Q7Z3Y7 SNORA28-201ENST00000606769 126 ntBASIC1.99□□□□□ -2.09
KRT28Q7Z3Y7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRT28Q7Z3Y7 RNU6-674P-201ENST00000363831 107 ntBASIC1.98□□□□□ -2.09
KRT28Q7Z3Y7 Y_RNA.304-201ENST00000365011 112 ntBASIC1.98□□□□□ -2.09
KRT28Q7Z3Y7 RNY4P28-201ENST00000365281 93 ntBASIC1.98□□□□□ -2.09
KRT28Q7Z3Y7 Y_RNA.354-201ENST00000365448 111 ntBASIC1.98□□□□□ -2.09
KRT28Q7Z3Y7 RNU6-144P-201ENST00000383951 107 ntBASIC1.98□□□□□ -2.09
KRT28Q7Z3Y7 RNU6-360P-201ENST00000390944 104 ntBASIC1.98□□□□□ -2.09
KRT28Q7Z3Y7 AL034345.1-201ENST00000407768 123 ntBASIC1.98□□□□□ -2.09
KRT28Q7Z3Y7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.98□□□□□ -2.09
KRT28Q7Z3Y7 RNU7-28P-201ENST00000516759 62 ntBASIC1.98□□□□□ -2.09
KRT28Q7Z3Y7 AC024614.2-201ENST00000577584 372 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms