Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.97□□□□□ -2.09
USP43Q70EL4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
USP43Q70EL4 RNA5SP112-201ENST00000515937 99 ntBASIC1.97□□□□□ -2.09
USP43Q70EL4 RN7SKP19-201ENST00000516016 252 ntBASIC1.97□□□□□ -2.09
USP43Q70EL4 Y_RNA.677-201ENST00000516401 85 ntBASIC1.97□□□□□ -2.09
USP43Q70EL4 RNU6-1061P-201ENST00000516530 99 ntBASIC1.97□□□□□ -2.09
USP43Q70EL4 RNU6-197P-201ENST00000516680 100 ntBASIC1.97□□□□□ -2.09
USP43Q70EL4 SCARNA3-201ENST00000517097 143 ntBASIC1.97□□□□□ -2.09
USP43Q70EL4 AC090142.3-201ENST00000519012 385 ntBASIC1.97□□□□□ -2.09
USP43Q70EL4 AC018630.3-201ENST00000542637 96 ntBASIC1.97□□□□□ -2.09
USP43Q70EL4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.97□□□□□ -2.09
USP43Q70EL4 MIR5007-201ENST00000583098 95 ntBASIC1.97□□□□□ -2.09
USP43Q70EL4 MIR5002-201ENST00000584713 97 ntBASIC1.97□□□□□ -2.09
USP43Q70EL4 AC103810.6-201ENST00000606708 136 ntBASIC1.97□□□□□ -2.09
USP43Q70EL4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.97□□□□□ -2.09
USP43Q70EL4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.97□□□□□ -2.09
USP43Q70EL4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.97□□□□□ -2.09
USP43Q70EL4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
USP43Q70EL4 RNU6-486P-201ENST00000363116 107 ntBASIC1.96□□□□□ -2.1
USP43Q70EL4 RNU6-674P-201ENST00000363831 107 ntBASIC1.96□□□□□ -2.1
USP43Q70EL4 RNU6-1323P-201ENST00000384025 107 ntBASIC1.96□□□□□ -2.1
USP43Q70EL4 RNU6-49P-201ENST00000384256 107 ntBASIC1.96□□□□□ -2.1
USP43Q70EL4 RNU6-880P-201ENST00000384526 107 ntBASIC1.96□□□□□ -2.1
USP43Q70EL4 RNU6-1274P-201ENST00000384557 107 ntBASIC1.96□□□□□ -2.1
USP43Q70EL4 MIR1283-1-201ENST00000408494 87 ntBASIC1.96□□□□□ -2.1
USP43Q70EL4 AL031737.1-201ENST00000450125 223 ntBASIC1.96□□□□□ -2.1
USP43Q70EL4 AC080013.2-201ENST00000460866 323 ntBASIC1.96□□□□□ -2.1
USP43Q70EL4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.96□□□□□ -2.1
USP43Q70EL4 RNU6-1337P-201ENST00000516525 95 ntBASIC1.96□□□□□ -2.1
USP43Q70EL4 RNU6-762P-201ENST00000517107 102 ntBASIC1.96□□□□□ -2.1
USP43Q70EL4 RNU6-537P-201ENST00000517277 103 ntBASIC1.96□□□□□ -2.1
USP43Q70EL4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.96□□□□□ -2.1
USP43Q70EL4 AC131055.1-201ENST00000584626 316 ntBASIC1.96□□□□□ -2.1
USP43Q70EL4 AC009831.4-201ENST00000620744 325 ntBASIC1.96□□□□□ -2.1
USP43Q70EL4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
USP43Q70EL4 AL159152.1-201ENST00000635019 2587 ntBASIC1.95□□□□□ -2.1
USP43Q70EL4 RNU6-944P-201ENST00000364023 107 ntBASIC1.95□□□□□ -2.1
USP43Q70EL4 Y_RNA.281-201ENST00000364774 94 ntBASIC1.95□□□□□ -2.1
USP43Q70EL4 RNA5SP160-201ENST00000364866 120 ntBASIC1.95□□□□□ -2.1
USP43Q70EL4 RNU6-1275P-201ENST00000391087 107 ntBASIC1.95□□□□□ -2.1
USP43Q70EL4 Y_RNA.587-201ENST00000391210 103 ntBASIC1.95□□□□□ -2.1
USP43Q70EL4 RNU2-55P-201ENST00000411146 174 ntBASIC1.95□□□□□ -2.1
USP43Q70EL4 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.95□□□□□ -2.1
USP43Q70EL4 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.95□□□□□ -2.1
USP43Q70EL4 Y_RNA.649-201ENST00000459077 103 ntBASIC1.95□□□□□ -2.1
USP43Q70EL4 RNA5SP233-201ENST00000459153 113 ntBASIC1.95□□□□□ -2.1
USP43Q70EL4 SNORA70.12-201ENST00000516084 153 ntBASIC1.95□□□□□ -2.1
USP43Q70EL4 RNU5F-4P-201ENST00000516581 114 ntBASIC1.95□□□□□ -2.1
USP43Q70EL4 AC015712.3-201ENST00000559380 164 ntBASIC1.95□□□□□ -2.1
USP43Q70EL4 AC105245.1-201ENST00000581934 244 ntBASIC1.95□□□□□ -2.1
USP43Q70EL4 AC097639.2-201ENST00000603159 172 ntBASIC1.95□□□□□ -2.1
USP43Q70EL4 MIR6873-201ENST00000622788 63 ntBASIC1.95□□□□□ -2.1
USP43Q70EL4 AC106754.2-201ENST00000623006 233 ntBASIC1.95□□□□□ -2.1
USP43Q70EL4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
USP43Q70EL4 MTND5P18-201ENST00000445624 1801 ntBASIC1.94□□□□□ -2.1
USP43Q70EL4 SNORD114-1-201ENST00000362705 72 ntBASIC1.94□□□□□ -2.1
USP43Q70EL4 SNORA72-201ENST00000384339 132 ntBASIC1.94□□□□□ -2.1
USP43Q70EL4 SNORA48.3-201ENST00000391081 134 ntBASIC1.94□□□□□ -2.1
USP43Q70EL4 MIR873-201ENST00000401120 77 ntBASIC1.94□□□□□ -2.1
USP43Q70EL4 MIR300-201ENST00000401138 83 ntBASIC1.94□□□□□ -2.1
USP43Q70EL4 MIR1294-201ENST00000408503 142 ntBASIC1.94□□□□□ -2.1
USP43Q70EL4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.94□□□□□ -2.1
USP43Q70EL4 AL591806.2-201ENST00000433122 173 ntBASIC1.94□□□□□ -2.1
USP43Q70EL4 RNU6-221P-201ENST00000459541 99 ntBASIC1.94□□□□□ -2.1
USP43Q70EL4 RPL36AP21-201ENST00000490372 323 ntBASIC1.94□□□□□ -2.1
USP43Q70EL4 RN7SL274P-201ENST00000492268 272 ntBASIC1.94□□□□□ -2.1
USP43Q70EL4 ATP5EP1-201ENST00000510257 156 ntBASIC1.94□□□□□ -2.1
USP43Q70EL4 MIR449C-201ENST00000516047 92 ntBASIC1.94□□□□□ -2.1
USP43Q70EL4 Y_RNA.690-201ENST00000516603 95 ntBASIC1.94□□□□□ -2.1
USP43Q70EL4 AC078899.2-201ENST00000595282 212 ntBASIC1.94□□□□□ -2.1
USP43Q70EL4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.94□□□□□ -2.1
USP43Q70EL4 AP001318.4-201ENST00000616637 121 ntBASIC1.94□□□□□ -2.1
USP43Q70EL4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
USP43Q70EL4 Y_RNA.91-201ENST00000363042 107 ntBASIC1.93□□□□□ -2.1
USP43Q70EL4 RNU6-647P-201ENST00000364243 107 ntBASIC1.93□□□□□ -2.1
USP43Q70EL4 RNU6-294P-201ENST00000364999 102 ntBASIC1.93□□□□□ -2.1
USP43Q70EL4 Y_RNA.328-201ENST00000365208 113 ntBASIC1.93□□□□□ -2.1
USP43Q70EL4 RNU6-234P-201ENST00000365229 104 ntBASIC1.93□□□□□ -2.1
USP43Q70EL4 RNU6-975P-201ENST00000384296 105 ntBASIC1.93□□□□□ -2.1
USP43Q70EL4 MIR17-201ENST00000385012 84 ntBASIC1.93□□□□□ -2.1
USP43Q70EL4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
USP43Q70EL4 RNA5SP496-201ENST00000391240 109 ntBASIC1.93□□□□□ -2.1
USP43Q70EL4 AC018634.1-201ENST00000437554 401 ntBASIC1.93□□□□□ -2.1
USP43Q70EL4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.93□□□□□ -2.1
USP43Q70EL4 RNU7-14P-201ENST00000459331 62 ntBASIC1.93□□□□□ -2.1
USP43Q70EL4 RNU7-57P-201ENST00000459540 60 ntBASIC1.93□□□□□ -2.1
USP43Q70EL4 RNU7-193P-201ENST00000516723 65 ntBASIC1.93□□□□□ -2.1
USP43Q70EL4 POLR3GP1-201ENST00000594073 261 ntBASIC1.93□□□□□ -2.1
USP43Q70EL4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.93□□□□□ -2.1
USP43Q70EL4 AC025166.1-201ENST00000612411 163 ntBASIC1.93□□□□□ -2.1
USP43Q70EL4 AL121890.5-201ENST00000620848 304 ntBASIC1.93□□□□□ -2.1
USP43Q70EL4 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.93□□□□□ -2.1
USP43Q70EL4 AC090517.3-201ENST00000625170 141 ntBASIC1.93□□□□□ -2.1
USP43Q70EL4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
USP43Q70EL4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
USP43Q70EL4 SNORA27.1-201ENST00000362604 124 ntBASIC1.92□□□□□ -2.1
USP43Q70EL4 SNORD31B-201ENST00000364977 69 ntBASIC1.92□□□□□ -2.1
USP43Q70EL4 MIR488-201ENST00000365739 83 ntBASIC1.92□□□□□ -2.1
USP43Q70EL4 Y_RNA.549-201ENST00000384657 102 ntBASIC1.92□□□□□ -2.1
USP43Q70EL4 MIR891A-201ENST00000401237 79 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 236.3 ms