Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
PTCHD4Q6ZW05 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
PTCHD4Q6ZW05 RNU6-484P-201ENST00000384016 107 ntBASIC1.91□□□□□ -2.1
PTCHD4Q6ZW05 RNU6-643P-201ENST00000384018 107 ntBASIC1.91□□□□□ -2.1
PTCHD4Q6ZW05 Y_RNA.432-201ENST00000384087 111 ntBASIC1.91□□□□□ -2.1
PTCHD4Q6ZW05 RNU6-950P-201ENST00000384651 107 ntBASIC1.91□□□□□ -2.1
PTCHD4Q6ZW05 RNA5SP212-201ENST00000391223 107 ntBASIC1.91□□□□□ -2.1
PTCHD4Q6ZW05 RNU2-55P-201ENST00000411146 174 ntBASIC1.91□□□□□ -2.1
PTCHD4Q6ZW05 AC006461.1-201ENST00000412637 326 ntBASIC1.91□□□□□ -2.1
PTCHD4Q6ZW05 SUMO1P3-201ENST00000439961 304 ntBASIC1.91□□□□□ -2.1
PTCHD4Q6ZW05 RNA5SP57-201ENST00000459463 123 ntBASIC1.91□□□□□ -2.1
PTCHD4Q6ZW05 AC008413.1-201ENST00000511864 177 ntBASIC1.91□□□□□ -2.1
PTCHD4Q6ZW05 RNU6-1299P-201ENST00000516316 100 ntBASIC1.91□□□□□ -2.1
PTCHD4Q6ZW05 SCARNA16.3-201ENST00000516595 184 ntBASIC1.91□□□□□ -2.1
PTCHD4Q6ZW05 SNORA31.17-201ENST00000516953 127 ntBASIC1.91□□□□□ -2.1
PTCHD4Q6ZW05 Y_RNA.714-201ENST00000517065 90 ntBASIC1.91□□□□□ -2.1
PTCHD4Q6ZW05 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.91□□□□□ -2.1
PTCHD4Q6ZW05 SNORA28-201ENST00000606769 126 ntBASIC1.91□□□□□ -2.1
PTCHD4Q6ZW05 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.91□□□□□ -2.1
PTCHD4Q6ZW05 U8.5-201ENST00000364528 136 ntBASIC1.9□□□□□ -2.11
PTCHD4Q6ZW05 Y_RNA.398-201ENST00000383952 99 ntBASIC1.9□□□□□ -2.11
PTCHD4Q6ZW05 SNORD72-201ENST00000390994 80 ntBASIC1.9□□□□□ -2.11
PTCHD4Q6ZW05 RNU4-43P-201ENST00000410628 137 ntBASIC1.9□□□□□ -2.11
PTCHD4Q6ZW05 RNU7-34P-201ENST00000459394 64 ntBASIC1.9□□□□□ -2.11
PTCHD4Q6ZW05 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.9□□□□□ -2.11
PTCHD4Q6ZW05 AC107027.2-201ENST00000512197 115 ntBASIC1.9□□□□□ -2.11
PTCHD4Q6ZW05 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.9□□□□□ -2.11
PTCHD4Q6ZW05 MIR3935-201ENST00000583472 104 ntBASIC1.9□□□□□ -2.11
PTCHD4Q6ZW05 MIR4762-201ENST00000585261 75 ntBASIC1.9□□□□□ -2.11
PTCHD4Q6ZW05 AC008507.4-201ENST00000585464 127 ntBASIC1.9□□□□□ -2.11
PTCHD4Q6ZW05 AL365434.2-201ENST00000607979 234 ntBASIC1.9□□□□□ -2.11
PTCHD4Q6ZW05 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.9□□□□□ -2.11
PTCHD4Q6ZW05 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
PTCHD4Q6ZW05 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
PTCHD4Q6ZW05 RNU6-1084P-201ENST00000362498 107 ntBASIC1.89□□□□□ -2.11
PTCHD4Q6ZW05 Y_RNA.170-201ENST00000363746 110 ntBASIC1.89□□□□□ -2.11
PTCHD4Q6ZW05 SNORD50B-201ENST00000364995 70 ntBASIC1.89□□□□□ -2.11
PTCHD4Q6ZW05 RNU6-1138P-201ENST00000365359 106 ntBASIC1.89□□□□□ -2.11
PTCHD4Q6ZW05 RNU6-1130P-201ENST00000365434 107 ntBASIC1.89□□□□□ -2.11
PTCHD4Q6ZW05 RNU6-1031P-201ENST00000384773 107 ntBASIC1.89□□□□□ -2.11
PTCHD4Q6ZW05 RNU6-239P-201ENST00000390990 99 ntBASIC1.89□□□□□ -2.11
PTCHD4Q6ZW05 AL034345.1-201ENST00000407768 123 ntBASIC1.89□□□□□ -2.11
PTCHD4Q6ZW05 SNORA79-201ENST00000408376 140 ntBASIC1.89□□□□□ -2.11
PTCHD4Q6ZW05 snoU13.27-201ENST00000459278 104 ntBASIC1.89□□□□□ -2.11
PTCHD4Q6ZW05 RNU6-197P-201ENST00000516680 100 ntBASIC1.89□□□□□ -2.11
PTCHD4Q6ZW05 RNA5SP481-201ENST00000516814 122 ntBASIC1.89□□□□□ -2.11
PTCHD4Q6ZW05 MTND5P41-201ENST00000517498 206 ntBASIC1.89□□□□□ -2.11
PTCHD4Q6ZW05 MIR4709-201ENST00000577272 72 ntBASIC1.89□□□□□ -2.11
PTCHD4Q6ZW05 MIR4672-201ENST00000583126 81 ntBASIC1.89□□□□□ -2.11
PTCHD4Q6ZW05 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.89□□□□□ -2.11
PTCHD4Q6ZW05 Y_RNA.91-201ENST00000363042 107 ntBASIC1.88□□□□□ -2.11
PTCHD4Q6ZW05 SNORD116-18-201ENST00000383961 92 ntBASIC1.88□□□□□ -2.11
PTCHD4Q6ZW05 Y_RNA.486-201ENST00000384398 107 ntBASIC1.88□□□□□ -2.11
PTCHD4Q6ZW05 Y_RNA.510-201ENST00000384511 114 ntBASIC1.88□□□□□ -2.11
PTCHD4Q6ZW05 AL603908.1-201ENST00000406098 201 ntBASIC1.88□□□□□ -2.11
PTCHD4Q6ZW05 RNU2-70P-201ENST00000410718 179 ntBASIC1.88□□□□□ -2.11
PTCHD4Q6ZW05 RNU4-53P-201ENST00000410828 140 ntBASIC1.88□□□□□ -2.11
PTCHD4Q6ZW05 CALM2P4-201ENST00000430810 426 ntBASIC1.88□□□□□ -2.11
PTCHD4Q6ZW05 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
PTCHD4Q6ZW05 RNU6-1116P-201ENST00000517269 99 ntBASIC1.88□□□□□ -2.11
PTCHD4Q6ZW05 MIR4662B-201ENST00000579498 81 ntBASIC1.88□□□□□ -2.11
PTCHD4Q6ZW05 AC087685.1-201ENST00000587507 141 ntBASIC1.88□□□□□ -2.11
PTCHD4Q6ZW05 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.88□□□□□ -2.11
PTCHD4Q6ZW05 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.88□□□□□ -2.11
PTCHD4Q6ZW05 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.88□□□□□ -2.11
PTCHD4Q6ZW05 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.88□□□□□ -2.11
PTCHD4Q6ZW05 MIRLET7C-201ENST00000362160 84 ntBASIC1.87□□□□□ -2.11
PTCHD4Q6ZW05 RNU6-774P-201ENST00000363238 107 ntBASIC1.87□□□□□ -2.11
PTCHD4Q6ZW05 Y_RNA.634-201ENST00000364811 113 ntBASIC1.87□□□□□ -2.11
PTCHD4Q6ZW05 SNORD45.4-201ENST00000516629 73 ntBASIC1.87□□□□□ -2.11
PTCHD4Q6ZW05 MIR4713-201ENST00000582691 75 ntBASIC1.87□□□□□ -2.11
PTCHD4Q6ZW05 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
PTCHD4Q6ZW05 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
PTCHD4Q6ZW05 snoU2-30.1-201ENST00000365012 70 ntBASIC1.86□□□□□ -2.11
PTCHD4Q6ZW05 RNU6-449P-201ENST00000383914 107 ntBASIC1.86□□□□□ -2.11
PTCHD4Q6ZW05 MIR802-201ENST00000390235 94 ntBASIC1.86□□□□□ -2.11
PTCHD4Q6ZW05 Y_RNA.580-201ENST00000391004 95 ntBASIC1.86□□□□□ -2.11
PTCHD4Q6ZW05 U8.16-201ENST00000391279 133 ntBASIC1.86□□□□□ -2.11
PTCHD4Q6ZW05 MIR548M-201ENST00000408260 86 ntBASIC1.86□□□□□ -2.11
PTCHD4Q6ZW05 RPL31P63-201ENST00000422565 375 ntBASIC1.86□□□□□ -2.11
PTCHD4Q6ZW05 RNA5SP153-201ENST00000516498 76 ntBASIC1.86□□□□□ -2.11
PTCHD4Q6ZW05 RNU7-121P-201ENST00000516604 62 ntBASIC1.86□□□□□ -2.11
PTCHD4Q6ZW05 RNA5SP168-201ENST00000516642 112 ntBASIC1.86□□□□□ -2.11
PTCHD4Q6ZW05 AC120024.3-201ENST00000603167 156 ntBASIC1.86□□□□□ -2.11
PTCHD4Q6ZW05 AC021506.2-201ENST00000612354 169 ntBASIC1.86□□□□□ -2.11
PTCHD4Q6ZW05 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
PTCHD4Q6ZW05 SNORD14E-201ENST00000364009 85 ntBASIC1.85□□□□□ -2.11
PTCHD4Q6ZW05 Y_RNA.337-201ENST00000365312 102 ntBASIC1.85□□□□□ -2.11
PTCHD4Q6ZW05 RNU6-424P-201ENST00000384367 105 ntBASIC1.85□□□□□ -2.11
PTCHD4Q6ZW05 RNU6-163P-201ENST00000384396 106 ntBASIC1.85□□□□□ -2.11
PTCHD4Q6ZW05 Y_RNA.506-201ENST00000384494 102 ntBASIC1.85□□□□□ -2.11
PTCHD4Q6ZW05 SUMO2P12-201ENST00000405924 140 ntBASIC1.85□□□□□ -2.11
PTCHD4Q6ZW05 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.85□□□□□ -2.11
PTCHD4Q6ZW05 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.85□□□□□ -2.11
PTCHD4Q6ZW05 AC099513.1-201ENST00000490423 301 ntBASIC1.85□□□□□ -2.11
PTCHD4Q6ZW05 RN7SL274P-201ENST00000492268 272 ntBASIC1.85□□□□□ -2.11
PTCHD4Q6ZW05 AC114811.1-201ENST00000507207 168 ntBASIC1.85□□□□□ -2.11
PTCHD4Q6ZW05 RNU7-200P-201ENST00000516105 62 ntBASIC1.85□□□□□ -2.11
PTCHD4Q6ZW05 AL160236.1-201ENST00000556317 195 ntBASIC1.85□□□□□ -2.11
PTCHD4Q6ZW05 MIR378D2-201ENST00000580636 98 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms