Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 AL603910.2-201ENST00000407268 136 ntBASIC1.33□□□□□ -2.2
CDHR3Q6ZTQ4 Y_RNA.621-201ENST00000411065 96 ntBASIC1.33□□□□□ -2.2
CDHR3Q6ZTQ4 RPS27P16-201ENST00000425758 201 ntBASIC1.33□□□□□ -2.2
CDHR3Q6ZTQ4 BTF3P11-201ENST00000426582 477 ntBASIC1.33□□□□□ -2.2
CDHR3Q6ZTQ4 AC027119.1-201ENST00000440877 241 ntBASIC1.33□□□□□ -2.2
CDHR3Q6ZTQ4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.33□□□□□ -2.2
CDHR3Q6ZTQ4 AC127455.1-201ENST00000565496 145 ntBASIC1.33□□□□□ -2.2
CDHR3Q6ZTQ4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.33□□□□□ -2.2
CDHR3Q6ZTQ4 AC005357.1-201ENST00000588399 301 ntBASIC1.33□□□□□ -2.2
CDHR3Q6ZTQ4 AL359821.1-201ENST00000605519 182 ntBASIC1.33□□□□□ -2.2
CDHR3Q6ZTQ4 U2.14-201ENST00000615943 113 ntBASIC1.33□□□□□ -2.2
CDHR3Q6ZTQ4 AL591926.4-201ENST00000616895 298 ntBASIC1.33□□□□□ -2.2
CDHR3Q6ZTQ4 MIR548AY-201ENST00000617669 107 ntBASIC1.33□□□□□ -2.2
CDHR3Q6ZTQ4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.33□□□□□ -2.2
CDHR3Q6ZTQ4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.33□□□□□ -2.2
CDHR3Q6ZTQ4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.32□□□□□ -2.2
CDHR3Q6ZTQ4 UBE2WP1-201ENST00000362030 340 ntBASIC1.32□□□□□ -2.2
CDHR3Q6ZTQ4 MIRLET7C-201ENST00000362160 84 ntBASIC1.32□□□□□ -2.2
CDHR3Q6ZTQ4 MIR335-201ENST00000362173 94 ntBASIC1.32□□□□□ -2.2
CDHR3Q6ZTQ4 Y_RNA.14-201ENST00000362415 103 ntBASIC1.32□□□□□ -2.2
CDHR3Q6ZTQ4 Y_RNA.44-201ENST00000362676 108 ntBASIC1.32□□□□□ -2.2
CDHR3Q6ZTQ4 Y_RNA.275-201ENST00000364726 110 ntBASIC1.32□□□□□ -2.2
CDHR3Q6ZTQ4 Y_RNA.277-201ENST00000364754 102 ntBASIC1.32□□□□□ -2.2
CDHR3Q6ZTQ4 SNORA72-201ENST00000384339 132 ntBASIC1.32□□□□□ -2.2
CDHR3Q6ZTQ4 Y_RNA.572-201ENST00000384757 98 ntBASIC1.32□□□□□ -2.2
CDHR3Q6ZTQ4 MIR520G-201ENST00000385064 90 ntBASIC1.32□□□□□ -2.2
CDHR3Q6ZTQ4 U8.16-201ENST00000391279 133 ntBASIC1.32□□□□□ -2.2
CDHR3Q6ZTQ4 SNORA36B-201ENST00000410438 131 ntBASIC1.32□□□□□ -2.2
CDHR3Q6ZTQ4 AC024067.1-201ENST00000426199 223 ntBASIC1.32□□□□□ -2.2
CDHR3Q6ZTQ4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.32□□□□□ -2.2
CDHR3Q6ZTQ4 RNU6-1132P-201ENST00000459214 107 ntBASIC1.32□□□□□ -2.2
CDHR3Q6ZTQ4 RNU7-94P-201ENST00000459576 63 ntBASIC1.32□□□□□ -2.2
CDHR3Q6ZTQ4 AL049830.1-201ENST00000468034 425 ntBASIC1.32□□□□□ -2.2
CDHR3Q6ZTQ4 RNU2-56P-201ENST00000516826 190 ntBASIC1.32□□□□□ -2.2
CDHR3Q6ZTQ4 AP002004.2-201ENST00000531656 154 ntBASIC1.32□□□□□ -2.2
CDHR3Q6ZTQ4 MIR3149-201ENST00000584629 83 ntBASIC1.32□□□□□ -2.2
CDHR3Q6ZTQ4 AL078604.3-201ENST00000615580 211 ntBASIC1.32□□□□□ -2.2
CDHR3Q6ZTQ4 7SK.10-201ENST00000621414 298 ntBASIC1.32□□□□□ -2.2
CDHR3Q6ZTQ4 Y_RNA.76-201ENST00000362931 109 ntBASIC1.31□□□□□ -2.2
CDHR3Q6ZTQ4 Y_RNA.164-201ENST00000363709 102 ntBASIC1.31□□□□□ -2.2
CDHR3Q6ZTQ4 Y_RNA.253-201ENST00000364562 112 ntBASIC1.31□□□□□ -2.2
CDHR3Q6ZTQ4 Y_RNA.265-201ENST00000364677 108 ntBASIC1.31□□□□□ -2.2
CDHR3Q6ZTQ4 RNU6-514P-201ENST00000384208 107 ntBASIC1.31□□□□□ -2.2
CDHR3Q6ZTQ4 RNU6-463P-201ENST00000384340 107 ntBASIC1.31□□□□□ -2.2
CDHR3Q6ZTQ4 RNU6-1065P-201ENST00000384513 106 ntBASIC1.31□□□□□ -2.2
CDHR3Q6ZTQ4 Y_RNA.562-201ENST00000384695 113 ntBASIC1.31□□□□□ -2.2
CDHR3Q6ZTQ4 RNU6-955P-201ENST00000410497 104 ntBASIC1.31□□□□□ -2.2
CDHR3Q6ZTQ4 RN7SKP200-201ENST00000410564 320 ntBASIC1.31□□□□□ -2.2
CDHR3Q6ZTQ4 RNU6-383P-201ENST00000410864 94 ntBASIC1.31□□□□□ -2.2
CDHR3Q6ZTQ4 RNU6-321P-201ENST00000410912 106 ntBASIC1.31□□□□□ -2.2
CDHR3Q6ZTQ4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.31□□□□□ -2.2
CDHR3Q6ZTQ4 RPL23AP54-201ENST00000495129 419 ntBASIC1.31□□□□□ -2.2
CDHR3Q6ZTQ4 AC005840.1-201ENST00000498412 377 ntBASIC1.31□□□□□ -2.2
CDHR3Q6ZTQ4 RNA5SP168-201ENST00000516642 112 ntBASIC1.31□□□□□ -2.2
CDHR3Q6ZTQ4 SUMO2P16-201ENST00000519475 264 ntBASIC1.31□□□□□ -2.2
CDHR3Q6ZTQ4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.31□□□□□ -2.2
CDHR3Q6ZTQ4 AL365434.2-201ENST00000607979 234 ntBASIC1.31□□□□□ -2.2
CDHR3Q6ZTQ4 U4.1-201ENST00000620349 87 ntBASIC1.31□□□□□ -2.2
CDHR3Q6ZTQ4 AL161722.3-201ENST00000605789 2983 ntBASIC1.3□□□□□ -2.2
CDHR3Q6ZTQ4 Y_RNA.288-201ENST00000364854 92 ntBASIC1.3□□□□□ -2.2
CDHR3Q6ZTQ4 Y_RNA.307-201ENST00000365022 117 ntBASIC1.3□□□□□ -2.2
CDHR3Q6ZTQ4 RNU6-211P-201ENST00000384047 107 ntBASIC1.3□□□□□ -2.2
CDHR3Q6ZTQ4 Y_RNA.452-201ENST00000384202 108 ntBASIC1.3□□□□□ -2.2
CDHR3Q6ZTQ4 Y_RNA.539-201ENST00000384635 107 ntBASIC1.3□□□□□ -2.2
CDHR3Q6ZTQ4 SNX2P2-201ENST00000424553 323 ntBASIC1.3□□□□□ -2.2
CDHR3Q6ZTQ4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.3□□□□□ -2.2
CDHR3Q6ZTQ4 AC093850.1-201ENST00000454121 251 ntBASIC1.3□□□□□ -2.2
CDHR3Q6ZTQ4 Y_RNA.673-201ENST00000516306 88 ntBASIC1.3□□□□□ -2.2
CDHR3Q6ZTQ4 AC090821.2-201ENST00000523552 176 ntBASIC1.3□□□□□ -2.2
CDHR3Q6ZTQ4 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.3□□□□□ -2.2
CDHR3Q6ZTQ4 MIR4778-201ENST00000577635 80 ntBASIC1.3□□□□□ -2.2
CDHR3Q6ZTQ4 MIR3128-201ENST00000581957 66 ntBASIC1.3□□□□□ -2.2
CDHR3Q6ZTQ4 AC037487.3-201ENST00000606668 112 ntBASIC1.3□□□□□ -2.2
CDHR3Q6ZTQ4 AC013791.1-201ENST00000616619 62 ntBASIC1.3□□□□□ -2.2
CDHR3Q6ZTQ4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CDHR3Q6ZTQ4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CDHR3Q6ZTQ4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.29□□□□□ -2.2
CDHR3Q6ZTQ4 Y_RNA.4-201ENST00000362333 112 ntBASIC1.29□□□□□ -2.2
CDHR3Q6ZTQ4 Y_RNA.54-201ENST00000362766 105 ntBASIC1.29□□□□□ -2.2
CDHR3Q6ZTQ4 SNORD68-201ENST00000363214 84 ntBASIC1.29□□□□□ -2.2
CDHR3Q6ZTQ4 RNU6-424P-201ENST00000384367 105 ntBASIC1.29□□□□□ -2.2
CDHR3Q6ZTQ4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.29□□□□□ -2.2
CDHR3Q6ZTQ4 MTND4LP30-201ENST00000454092 297 ntBASIC1.29□□□□□ -2.2
CDHR3Q6ZTQ4 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.29□□□□□ -2.2
CDHR3Q6ZTQ4 RNU1-123P-201ENST00000458950 160 ntBASIC1.29□□□□□ -2.2
CDHR3Q6ZTQ4 AC004223.1-201ENST00000479840 271 ntBASIC1.29□□□□□ -2.2
CDHR3Q6ZTQ4 TRMT112P2-201ENST00000512910 132 ntBASIC1.29□□□□□ -2.2
CDHR3Q6ZTQ4 SNORD116-28-201ENST00000516123 91 ntBASIC1.29□□□□□ -2.2
CDHR3Q6ZTQ4 MIR5692C2-201ENST00000577959 77 ntBASIC1.29□□□□□ -2.2
CDHR3Q6ZTQ4 AC011921.3-201ENST00000605540 361 ntBASIC1.29□□□□□ -2.2
CDHR3Q6ZTQ4 AC062037.2-201ENST00000610137 73 ntBASIC1.29□□□□□ -2.2
CDHR3Q6ZTQ4 AL157834.3-201ENST00000615543 103 ntBASIC1.29□□□□□ -2.2
CDHR3Q6ZTQ4 MIR26B-201ENST00000362251 77 ntBASIC1.28□□□□□ -2.2
CDHR3Q6ZTQ4 RNU6-1123P-201ENST00000362347 106 ntBASIC1.28□□□□□ -2.2
CDHR3Q6ZTQ4 Y_RNA.60-201ENST00000362831 98 ntBASIC1.28□□□□□ -2.2
CDHR3Q6ZTQ4 Y_RNA.122-201ENST00000363331 96 ntBASIC1.28□□□□□ -2.2
CDHR3Q6ZTQ4 SNORD27-201ENST00000363981 72 ntBASIC1.28□□□□□ -2.2
CDHR3Q6ZTQ4 Y_RNA.203-201ENST00000364106 102 ntBASIC1.28□□□□□ -2.2
CDHR3Q6ZTQ4 Y_RNA.796-201ENST00000364268 102 ntBASIC1.28□□□□□ -2.2
CDHR3Q6ZTQ4 RNU6-702P-201ENST00000364982 107 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 179.3 ms