Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 RNY1P6-201ENST00000384193 109 ntBASIC2.65□□□□□ -1.99
LRFN4Q6PJG9 MIR597-201ENST00000384968 97 ntBASIC2.65□□□□□ -1.99
LRFN4Q6PJG9 AL627390.1-201ENST00000396055 340 ntBASIC2.65□□□□□ -1.99
LRFN4Q6PJG9 RNU6-938P-201ENST00000411285 103 ntBASIC2.65□□□□□ -1.99
LRFN4Q6PJG9 HMGN2P35-201ENST00000412164 270 ntBASIC2.65□□□□□ -1.99
LRFN4Q6PJG9 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.65□□□□□ -1.99
LRFN4Q6PJG9 SNORA74D-201ENST00000516404 141 ntBASIC2.65□□□□□ -1.99
LRFN4Q6PJG9 SNORA18.7-201ENST00000516910 131 ntBASIC2.65□□□□□ -1.99
LRFN4Q6PJG9 AC007012.1-201ENST00000567192 175 ntBASIC2.65□□□□□ -1.99
LRFN4Q6PJG9 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.65□□□□□ -1.99
LRFN4Q6PJG9 MIR3651-201ENST00000630427 90 ntBASIC2.65□□□□□ -1.99
LRFN4Q6PJG9 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
LRFN4Q6PJG9 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
LRFN4Q6PJG9 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.64□□□□□ -1.99
LRFN4Q6PJG9 RNU6-349P-201ENST00000362402 107 ntBASIC2.64□□□□□ -1.99
LRFN4Q6PJG9 SNORA63D-201ENST00000364359 132 ntBASIC2.64□□□□□ -1.99
LRFN4Q6PJG9 SNORA71.1-201ENST00000364523 117 ntBASIC2.64□□□□□ -1.99
LRFN4Q6PJG9 Y_RNA.454-201ENST00000384224 113 ntBASIC2.64□□□□□ -1.99
LRFN4Q6PJG9 AL590004.2-201ENST00000404787 371 ntBASIC2.64□□□□□ -1.99
LRFN4Q6PJG9 MIR1283-2-201ENST00000408621 87 ntBASIC2.64□□□□□ -1.99
LRFN4Q6PJG9 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.64□□□□□ -1.99
LRFN4Q6PJG9 SNORD88.1-201ENST00000408684 91 ntBASIC2.64□□□□□ -1.99
LRFN4Q6PJG9 RNU6-830P-201ENST00000516353 107 ntBASIC2.64□□□□□ -1.99
LRFN4Q6PJG9 MIR4778-201ENST00000577635 80 ntBASIC2.64□□□□□ -1.99
LRFN4Q6PJG9 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.64□□□□□ -1.99
LRFN4Q6PJG9 MIR8057-201ENST00000620957 69 ntBASIC2.64□□□□□ -1.99
LRFN4Q6PJG9 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
LRFN4Q6PJG9 ICE2P2-201ENST00000483823 2787 ntBASIC2.63□□□□□ -1.99
LRFN4Q6PJG9 AL035425.3-201ENST00000564206 4996 ntBASIC2.63□□□□□ -1.99
LRFN4Q6PJG9 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LRFN4Q6PJG9 MIR518A2-201ENST00000384966 87 ntBASIC2.63□□□□□ -1.99
LRFN4Q6PJG9 MIR23A-201ENST00000385245 73 ntBASIC2.63□□□□□ -1.99
LRFN4Q6PJG9 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.63□□□□□ -1.99
LRFN4Q6PJG9 HSPE1P9-201ENST00000440046 311 ntBASIC2.63□□□□□ -1.99
LRFN4Q6PJG9 RPPH1-2P-201ENST00000516688 293 ntBASIC2.63□□□□□ -1.99
LRFN4Q6PJG9 RNU6-826P-201ENST00000516827 104 ntBASIC2.63□□□□□ -1.99
LRFN4Q6PJG9 RN7SKP57-201ENST00000517248 293 ntBASIC2.63□□□□□ -1.99
LRFN4Q6PJG9 RNU6-1116P-201ENST00000517269 99 ntBASIC2.63□□□□□ -1.99
LRFN4Q6PJG9 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LRFN4Q6PJG9 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.62□□□□□ -1.99
LRFN4Q6PJG9 RNU6-833P-201ENST00000363486 107 ntBASIC2.62□□□□□ -1.99
LRFN4Q6PJG9 Y_RNA.198-201ENST00000364013 98 ntBASIC2.62□□□□□ -1.99
LRFN4Q6PJG9 Y_RNA.309-201ENST00000365046 111 ntBASIC2.62□□□□□ -1.99
LRFN4Q6PJG9 Y_RNA.351-201ENST00000365436 96 ntBASIC2.62□□□□□ -1.99
LRFN4Q6PJG9 RNU6-424P-201ENST00000384367 105 ntBASIC2.62□□□□□ -1.99
LRFN4Q6PJG9 RNA5SP492-201ENST00000411330 114 ntBASIC2.62□□□□□ -1.99
LRFN4Q6PJG9 HMGN2P3-201ENST00000433603 273 ntBASIC2.62□□□□□ -1.99
LRFN4Q6PJG9 HMGN2P5-201ENST00000436882 273 ntBASIC2.62□□□□□ -1.99
LRFN4Q6PJG9 MIR3200-201ENST00000580767 85 ntBASIC2.62□□□□□ -1.99
LRFN4Q6PJG9 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.62□□□□□ -1.99
LRFN4Q6PJG9 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.62□□□□□ -1.99
LRFN4Q6PJG9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
LRFN4Q6PJG9 Y_RNA.213-201ENST00000364178 111 ntBASIC2.61□□□□□ -1.99
LRFN4Q6PJG9 SNORA48.1-201ENST00000390879 135 ntBASIC2.61□□□□□ -1.99
LRFN4Q6PJG9 HMGN2P39-201ENST00000398005 273 ntBASIC2.61□□□□□ -1.99
LRFN4Q6PJG9 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.61□□□□□ -1.99
LRFN4Q6PJG9 AL031737.1-201ENST00000450125 223 ntBASIC2.61□□□□□ -1.99
LRFN4Q6PJG9 ZNF861P-201ENST00000588126 639 ntBASIC2.61□□□□□ -1.99
LRFN4Q6PJG9 AC021443.1-201ENST00000604478 211 ntBASIC2.61□□□□□ -1.99
LRFN4Q6PJG9 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.61□□□□□ -1.99
LRFN4Q6PJG9 AC009487.2-201ENST00000420969 6821 ntBASIC2.61□□□□□ -1.99
LRFN4Q6PJG9 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
LRFN4Q6PJG9 MIR422A-201ENST00000362286 90 ntBASIC2.6□□□□□ -1.99
LRFN4Q6PJG9 Y_RNA.116-201ENST00000363292 103 ntBASIC2.6□□□□□ -1.99
LRFN4Q6PJG9 SNORA25.6-201ENST00000364121 118 ntBASIC2.6□□□□□ -1.99
LRFN4Q6PJG9 MIR520A-201ENST00000384862 85 ntBASIC2.6□□□□□ -1.99
LRFN4Q6PJG9 SNORD12C-201ENST00000386307 89 ntBASIC2.6□□□□□ -1.99
LRFN4Q6PJG9 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
LRFN4Q6PJG9 U8.16-201ENST00000391279 133 ntBASIC2.6□□□□□ -1.99
LRFN4Q6PJG9 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.6□□□□□ -1.99
LRFN4Q6PJG9 AC015922.2-201ENST00000435593 184 ntBASIC2.6□□□□□ -1.99
LRFN4Q6PJG9 RNY4P20-201ENST00000516678 93 ntBASIC2.6□□□□□ -1.99
LRFN4Q6PJG9 MIR4658-201ENST00000584344 65 ntBASIC2.6□□□□□ -1.99
LRFN4Q6PJG9 AC006023.1-201ENST00000603944 259 ntBASIC2.6□□□□□ -1.99
LRFN4Q6PJG9 AC091932.4-201ENST00000623386 200 ntBASIC2.6□□□□□ -1.99
LRFN4Q6PJG9 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.6□□□□□ -1.99
LRFN4Q6PJG9 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.6□□□□□ -1.99
LRFN4Q6PJG9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -1.99
LRFN4Q6PJG9 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
LRFN4Q6PJG9 AL442644.1-201ENST00000454390 3105 ntBASIC2.59□□□□□ -1.99
LRFN4Q6PJG9 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.59□□□□□ -1.99
LRFN4Q6PJG9 RNU6-1298P-201ENST00000362456 101 ntBASIC2.59□□□□□ -1.99
LRFN4Q6PJG9 Y_RNA.85-201ENST00000363014 111 ntBASIC2.59□□□□□ -1.99
LRFN4Q6PJG9 VTRNA1-1-201ENST00000363120 99 ntBASIC2.59□□□□□ -1.99
LRFN4Q6PJG9 RNY4P6-201ENST00000363667 96 ntBASIC2.59□□□□□ -1.99
LRFN4Q6PJG9 RNU6-1107P-201ENST00000364817 104 ntBASIC2.59□□□□□ -1.99
LRFN4Q6PJG9 RNU6-1031P-201ENST00000384773 107 ntBASIC2.59□□□□□ -1.99
LRFN4Q6PJG9 MIR759-201ENST00000390224 91 ntBASIC2.59□□□□□ -1.99
LRFN4Q6PJG9 U8.17-201ENST00000391292 132 ntBASIC2.59□□□□□ -1.99
LRFN4Q6PJG9 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.59□□□□□ -1.99
LRFN4Q6PJG9 RNU6-168P-201ENST00000516189 101 ntBASIC2.59□□□□□ -1.99
LRFN4Q6PJG9 RNA5SP168-201ENST00000516642 112 ntBASIC2.59□□□□□ -1.99
LRFN4Q6PJG9 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.59□□□□□ -1.99
LRFN4Q6PJG9 uc_338.28-201ENST00000612082 187 ntBASIC2.59□□□□□ -1.99
LRFN4Q6PJG9 AL596211.1-201ENST00000569873 2277 ntBASIC2.58□□□□□ -2
LRFN4Q6PJG9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.58□□□□□ -2
LRFN4Q6PJG9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
LRFN4Q6PJG9 Y_RNA.43-201ENST00000362670 111 ntBASIC2.58□□□□□ -2
LRFN4Q6PJG9 RNU6-525P-201ENST00000363685 104 ntBASIC2.58□□□□□ -2
LRFN4Q6PJG9 Y_RNA.241-201ENST00000364470 117 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms